RNA–Protein interactions for RNA: ENST00000380071.7

RFC3-201, Transcript of replication factor C subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC3, Length 2,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-201ENST00000380071 CDCA8Q53HL2 280 aa16.1■□□□□ 0.17
RFC3-201ENST00000380071 CFAP70Q5T0N1 1121 aa16.1■□□□□ 0.17
RFC3-201ENST00000380071 NOP58Q9Y2X3 529 aaKnown RBP16.1■□□□□ 0.17
RFC3-201ENST00000380071 ABCA9Q8IUA7 1624 aa16.08■□□□□ 0.17
RFC3-201ENST00000380071 VWDEQ8N2E2 1590 aa16.08■□□□□ 0.17
RFC3-201ENST00000380071 UGGT1Q9NYU2 1555 aa16.08■□□□□ 0.17
RFC3-201ENST00000380071 INO80Q9ULG1 1556 aaPredicted RBP16.08■□□□□ 0.17
RFC3-201ENST00000380071 WDR43Q15061 677 aaKnown RBP eCLIP16.08■□□□□ 0.17
RFC3-201ENST00000380071 ADGRF5Q8IZF2 1346 aa16.08■□□□□ 0.16
RFC3-201ENST00000380071 ADGRL1O94910 1474 aa16.08■□□□□ 0.16
RFC3-201ENST00000380071 PLEKHH1Q9ULM0 1364 aa16.07■□□□□ 0.16
RFC3-201ENST00000380071 CRBNQ96SW2 442 aa16.07■□□□□ 0.16
RFC3-201ENST00000380071 SYNMO15061 1565 aa16.07■□□□□ 0.16
RFC3-201ENST00000380071 ASXL1Q8IXJ9 1541 aa16.05■□□□□ 0.16
RFC3-201ENST00000380071 ANP32AP39687 249 aaKnown RBP16.05■□□□□ 0.16
RFC3-201ENST00000380071 C20orf194Q5TEA3 1177 aa16.05■□□□□ 0.16
RFC3-201ENST00000380071 IPO9Q96P70 1041 aaKnown RBP16.05■□□□□ 0.16
RFC3-201ENST00000380071 EIF3AQ14152 1382 aaKnown RBP16.04■□□□□ 0.16
RFC3-201ENST00000380071 MROH1Q8NDA8 1641 aa16.04■□□□□ 0.16
RFC3-201ENST00000380071 TCERG1O14776 1098 aaKnown RBP16.04■□□□□ 0.16
RFC3-201ENST00000380071 MYOM1P52179 1685 aa16.04■□□□□ 0.16
RFC3-201ENST00000380071 DUSP27Q5VZP5 1158 aa16.04■□□□□ 0.16
RFC3-201ENST00000380071 SKAP1Q86WV1 359 aa16.03■□□□□ 0.16
RFC3-201ENST00000380071 CCDC146Q8IYE0 955 aa16.03■□□□□ 0.16
RFC3-201ENST00000380071 ZNF521Q96K83 1311 aa16.02■□□□□ 0.16
RFC3-201ENST00000380071 ASXL2Q76L83 1435 aa16.02■□□□□ 0.16
RFC3-201ENST00000380071 PDE4AP27815 886 aa16.02■□□□□ 0.15
RFC3-201ENST00000380071 CARD14Q9BXL6 1004 aa16.02■□□□□ 0.15
RFC3-201ENST00000380071 KIAA1210Q9ULL0 1709 aa16.01■□□□□ 0.15
RFC3-201ENST00000380071 MAP3K4Q9Y6R4 1608 aa16.01■□□□□ 0.15
RFC3-201ENST00000380071 PIK3C2GO75747 1445 aa16.01■□□□□ 0.15
RFC3-201ENST00000380071 ERVK-7P63135 1459 aa16.01■□□□□ 0.15
RFC3-201ENST00000380071 GOLGA2Q08379 1002 aa16■□□□□ 0.15
RFC3-201ENST00000380071 ABCA6Q8N139 1617 aa16■□□□□ 0.15
RFC3-201ENST00000380071 NPC1L1Q9UHC9 1359 aa16■□□□□ 0.15
RFC3-201ENST00000380071 KDM5AP29375 1690 aaKnown RBP16■□□□□ 0.15
RFC3-201ENST00000380071 NPM2Q86SE8 214 aaKnown RBP15.99■□□□□ 0.15
RFC3-201ENST00000380071 CHGAP10645 457 aaKnown RBP15.99■□□□□ 0.15
RFC3-201ENST00000380071 NBR1Q14596 966 aa15.99■□□□□ 0.15
RFC3-201ENST00000380071 ZBTB47Q9UFB7 747 aaPredicted RBP15.99■□□□□ 0.15
RFC3-201ENST00000380071 MYOM2P54296 1465 aa15.99■□□□□ 0.15
RFC3-201ENST00000380071 KIDINS220Q9ULH0 1771 aa15.99■□□□□ 0.15
RFC3-201ENST00000380071 NEURL4Q96JN8 1562 aa15.99■□□□□ 0.15
RFC3-201ENST00000380071 BACH2Q9BYV9 841 aa15.98■□□□□ 0.15
RFC3-201ENST00000380071 KIF1BO60333 1816 aa15.98■□□□□ 0.15
RFC3-201ENST00000380071 SLFN5Q08AF3 891 aa15.98■□□□□ 0.15
RFC3-201ENST00000380071 EFCAB6Q5THR3 1501 aa15.97■□□□□ 0.15
RFC3-201ENST00000380071 APAF1O14727 1248 aa15.97■□□□□ 0.15
RFC3-201ENST00000380071 SPINK5Q9NQ38 1064 aaPredicted RBP15.97■□□□□ 0.15
RFC3-201ENST00000380071 MROH2AA6NES4 1674 aa15.97■□□□□ 0.15
RFC3-201ENST00000380071 PPRC1Q5VV67 1664 aaKnown RBP15.97■□□□□ 0.15
RFC3-201ENST00000380071 MS4A1P11836 297 aa15.96■□□□□ 0.15
RFC3-201ENST00000380071 NOS1P29475 1434 aa15.95■□□□□ 0.14
RFC3-201ENST00000380071 CFAP65Q6ZU64 1925 aaKnown RBP15.95■□□□□ 0.14
RFC3-201ENST00000380071 SLC24A1O60721 1099 aa15.95■□□□□ 0.14
RFC3-201ENST00000380071 GGT6Q6P531 493 aa15.95■□□□□ 0.14
RFC3-201ENST00000380071 TRAK1Q9UPV9 953 aa15.95■□□□□ 0.14
RFC3-201ENST00000380071 IFT172Q9UG01 1749 aa15.94■□□□□ 0.14
RFC3-201ENST00000380071 TRMT2AQ8IZ69 625 aaKnown RBP15.94■□□□□ 0.14
RFC3-201ENST00000380071 NRXN1Q9ULB1 1477 aa15.93■□□□□ 0.14
RFC3-201ENST00000380071 ZNF518AQ6AHZ1 1483 aa15.93■□□□□ 0.14
RFC3-201ENST00000380071 KDM2BQ8NHM5 1336 aa15.92■□□□□ 0.14
RFC3-201ENST00000380071 TMEM132EQ6IEE7 984 aa15.92■□□□□ 0.14
RFC3-201ENST00000380071 DMRT2Q9Y5R5 561 aa15.92■□□□□ 0.14
RFC3-201ENST00000380071 CENPJQ9HC77 1338 aaPredicted RBP15.92■□□□□ 0.14
RFC3-201ENST00000380071 LMTK2Q8IWU2 1503 aa15.91■□□□□ 0.14
RFC3-201ENST00000380071 NPM1P06748 294 aaKnown RBP eCLIP15.91■□□□□ 0.14
RFC3-201ENST00000380071 DEKP35659 375 aaKnown RBP15.91■□□□□ 0.14
RFC3-201ENST00000380071 NPATQ14207 1427 aa15.91■□□□□ 0.14
RFC3-201ENST00000380071 SLC12A5Q9H2X9 1139 aa15.9■□□□□ 0.14
RFC3-201ENST00000380071 C14orf93Q9H972 538 aaKnown RBP15.9■□□□□ 0.14
RFC3-201ENST00000380071 ADGRB3O60242 1522 aa15.9■□□□□ 0.14
RFC3-201ENST00000380071 BCAR3O75815 825 aa15.89■□□□□ 0.13
RFC3-201ENST00000380071 TNNT2P45379 298 aaPredicted RBP15.89■□□□□ 0.13
RFC3-201ENST00000380071 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.89■□□□□ 0.13
RFC3-201ENST00000380071 CD109Q6YHK3 1445 aa15.89■□□□□ 0.13
RFC3-201ENST00000380071 SBNO2Q9Y2G9 1366 aa15.88■□□□□ 0.13
RFC3-201ENST00000380071 NUTM2DQ5VT03 806 aaPredicted RBP15.88■□□□□ 0.13
RFC3-201ENST00000380071 MYO3AQ8NEV4 1616 aa15.88■□□□□ 0.13
RFC3-201ENST00000380071 FRMPD1Q5SYB0 1578 aa15.87■□□□□ 0.13
RFC3-201ENST00000380071 CENPQQ7L2Z9 268 aaPredicted RBP15.87■□□□□ 0.13
RFC3-201ENST00000380071 NKTRP30414 1462 aaKnown RBP15.87■□□□□ 0.13
RFC3-201ENST00000380071 NSD3Q9BZ95 1437 aa15.86■□□□□ 0.13
RFC3-201ENST00000380071 E9PSI1 815 aa15.86■□□□□ 0.13
RFC3-201ENST00000380071 POGZQ7Z3K3 1410 aa15.86■□□□□ 0.13
RFC3-201ENST00000380071 MORC1Q86VD1 984 aa15.86■□□□□ 0.13
RFC3-201ENST00000380071 POLR3AO14802 1390 aaPredicted RBP15.85■□□□□ 0.13
RFC3-201ENST00000380071 SETBP1Q9Y6X0 1596 aa15.85■□□□□ 0.13
RFC3-201ENST00000380071 PPLO60437 1756 aa15.84■□□□□ 0.13
RFC3-201ENST00000380071 WWC1Q8IX03 1113 aa15.84■□□□□ 0.13
RFC3-201ENST00000380071 MLH3Q9UHC1 1453 aa15.84■□□□□ 0.13
RFC3-201ENST00000380071 ADGRB1O14514 1584 aa15.84■□□□□ 0.13
RFC3-201ENST00000380071 RAPGEF3O95398 923 aa15.84■□□□□ 0.13
RFC3-201ENST00000380071 NEUROD2Q15784 382 aa15.83■□□□□ 0.12
RFC3-201ENST00000380071 QRICH2Q9H0J4 1663 aa15.82■□□□□ 0.12
RFC3-201ENST00000380071 RRP7AQ9Y3A4 280 aaKnown RBP15.82■□□□□ 0.12
RFC3-201ENST00000380071 OSCARQ8IYS5 282 aa15.82■□□□□ 0.12
RFC3-201ENST00000380071 RPGRIP1LQ68CZ1 1315 aa15.81■□□□□ 0.12
RFC3-201ENST00000380071 SENP3Q9H4L4 574 aaPredicted RBP15.81■□□□□ 0.12
RFC3-201ENST00000380071 LAS1LQ9Y4W2 734 aaKnown RBP15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms