RNA–Protein interactions for RNA: ENST00000379540.7

NFX1-203, Transcript of nuclear transcription factor, X-box binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NFX1, Length 4,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFX1-203ENST00000379540 DNTTIP2Q5QJE6 756 aaKnown RBP9.41□□□□□ -0.9
NFX1-203ENST00000379540 EVC2Q86UK5 1308 aa9.4□□□□□ -0.9
NFX1-203ENST00000379540 SYAP1Q96A49 352 aaPredicted RBP9.4□□□□□ -0.9
NFX1-203ENST00000379540 NAP1L2Q9ULW6 460 aaPredicted RBP9.4□□□□□ -0.9
NFX1-203ENST00000379540 RPRD2Q5VT52 1461 aaKnown RBP9.4□□□□□ -0.9
NFX1-203ENST00000379540 ANKRD30BQ9BXX2 1392 aa9.4□□□□□ -0.91
NFX1-203ENST00000379540 CCDC141Q6ZP82 1450 aa9.4□□□□□ -0.91
NFX1-203ENST00000379540 GBP4Q96PP9 640 aa9.4□□□□□ -0.91
NFX1-203ENST00000379540 PREX2Q70Z35 1606 aa9.39□□□□□ -0.91
NFX1-203ENST00000379540 KIAA2012Q0VF49 1180 aa9.39□□□□□ -0.91
NFX1-203ENST00000379540 SAFB2Q14151 953 aaKnown RBP eCLIP9.39□□□□□ -0.91
NFX1-203ENST00000379540 TCERG1O14776 1098 aaKnown RBP9.39□□□□□ -0.91
NFX1-203ENST00000379540 KIAA1107Q9UPP5 1409 aa9.39□□□□□ -0.91
NFX1-203ENST00000379540 TPM4P67936 248 aa9.38□□□□□ -0.91
NFX1-203ENST00000379540 CCDC9Q9Y3X0 531 aaKnown RBP9.38□□□□□ -0.91
NFX1-203ENST00000379540 KIF15Q9NS87 1388 aa9.38□□□□□ -0.91
NFX1-203ENST00000379540 WASHC2AQ641Q2 1341 aa9.38□□□□□ -0.91
NFX1-203ENST00000379540 SOX12O15370 315 aa9.38□□□□□ -0.91
NFX1-203ENST00000379540 HNRNPMP52272 730 aaKnown RBP eCLIP9.38□□□□□ -0.91
NFX1-203ENST00000379540 CGNL1Q0VF96 1302 aa9.37□□□□□ -0.91
NFX1-203ENST00000379540 G3V3G9 751 aa9.37□□□□□ -0.91
NFX1-203ENST00000379540 DCAF8Q5TAQ9 597 aa9.37□□□□□ -0.91
NFX1-203ENST00000379540 USP35Q9P2H5 1018 aa9.37□□□□□ -0.91
NFX1-203ENST00000379540 RCAN3Q9UKA8 241 aa9.37□□□□□ -0.91
NFX1-203ENST00000379540 ARHGAP5Q13017 1502 aa9.37□□□□□ -0.91
NFX1-203ENST00000379540 DENND4BO75064 1496 aaPredicted RBP9.37□□□□□ -0.91
NFX1-203ENST00000379540 CLASP1Q7Z460 1538 aa9.37□□□□□ -0.91
NFX1-203ENST00000379540 UHRF1BP1LA0JNW5 1464 aa9.37□□□□□ -0.91
NFX1-203ENST00000379540 PZPP20742 1482 aa9.37□□□□□ -0.91
NFX1-203ENST00000379540 L3MBTL2Q969R5 705 aa9.36□□□□□ -0.91
NFX1-203ENST00000379540 COG3Q96JB2 828 aa9.36□□□□□ -0.91
NFX1-203ENST00000379540 GTF2E1P29083 439 aaPredicted RBP9.36□□□□□ -0.91
NFX1-203ENST00000379540 ISY1Q9ULR0 285 aaKnown RBP9.36□□□□□ -0.91
NFX1-203ENST00000379540 MYO5CQ9NQX4 1742 aa9.35□□□□□ -0.91
NFX1-203ENST00000379540 C1orf141Q5JVX7 400 aa9.35□□□□□ -0.91
NFX1-203ENST00000379540 KDM5BQ9UGL1 1544 aa9.35□□□□□ -0.91
NFX1-203ENST00000379540 KDM5DQ9BY66 1539 aa9.35□□□□□ -0.91
NFX1-203ENST00000379540 AAMPQ13685 434 aa9.35□□□□□ -0.91
NFX1-203ENST00000379540 NOP58Q9Y2X3 529 aaKnown RBP9.35□□□□□ -0.91
NFX1-203ENST00000379540 FOXD1Q16676 465 aa9.34□□□□□ -0.91
NFX1-203ENST00000379540 ITPRIPQ8IWB1 547 aa9.34□□□□□ -0.91
NFX1-203ENST00000379540 SMC4Q9NTJ3 1288 aa9.34□□□□□ -0.91
NFX1-203ENST00000379540 SAMD9LQ8IVG5 1584 aa9.34□□□□□ -0.91
NFX1-203ENST00000379540 TEX14Q8IWB6 1497 aa9.34□□□□□ -0.91
NFX1-203ENST00000379540 MAST1Q9Y2H9 1570 aa9.34□□□□□ -0.92
NFX1-203ENST00000379540 CENPJQ9HC77 1338 aaPredicted RBP9.33□□□□□ -0.92
NFX1-203ENST00000379540 HSP90B1P14625 803 aaKnown RBP9.33□□□□□ -0.92
NFX1-203ENST00000379540 CDC42BPBQ9Y5S2 1711 aa9.33□□□□□ -0.92
NFX1-203ENST00000379540 MBD5Q9P267 1494 aa9.33□□□□□ -0.92
NFX1-203ENST00000379540 NEXNQ0ZGT2 675 aa9.33□□□□□ -0.92
NFX1-203ENST00000379540 MYBBP1AQ9BQG0 1328 aaKnown RBP9.33□□□□□ -0.92
NFX1-203ENST00000379540 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.33□□□□□ -0.92
NFX1-203ENST00000379540 TEFQ10587 303 aa9.32□□□□□ -0.92
NFX1-203ENST00000379540 TTC37Q6PGP7 1564 aa9.32□□□□□ -0.92
NFX1-203ENST00000379540 SYCP2Q9BX26 1530 aa9.32□□□□□ -0.92
NFX1-203ENST00000379540 DDX58O95786 925 aaKnown RBP9.32□□□□□ -0.92
NFX1-203ENST00000379540 AMOTL1Q8IY63 956 aa9.32□□□□□ -0.92
NFX1-203ENST00000379540 PLCB2Q00722 1185 aa9.31□□□□□ -0.92
NFX1-203ENST00000379540 CPLX2Q6PUV4 134 aaKnown RBP9.31□□□□□ -0.92
NFX1-203ENST00000379540 ZCCHC11Q5TAX3 1644 aaKnown RBP9.31□□□□□ -0.92
NFX1-203ENST00000379540 ERCC6L2Q5T890 1561 aa9.31□□□□□ -0.92
NFX1-203ENST00000379540 EVA1CP58658 441 aa9.31□□□□□ -0.92
NFX1-203ENST00000379540 PLCH2O75038 1416 aa9.3□□□□□ -0.92
NFX1-203ENST00000379540 E9PSI1 815 aa9.3□□□□□ -0.92
NFX1-203ENST00000379540 TTC5Q8N0Z6 440 aa9.3□□□□□ -0.92
NFX1-203ENST00000379540 NOL10Q9BSC4 688 aaKnown RBP9.3□□□□□ -0.92
NFX1-203ENST00000379540 ZNF330Q9Y3S2 320 aaPredicted RBP9.3□□□□□ -0.92
NFX1-203ENST00000379540 ATP6V1DQ9Y5K8 247 aa9.3□□□□□ -0.92
NFX1-203ENST00000379540 ARHGEF12Q9NZN5 1544 aa9.3□□□□□ -0.92
NFX1-203ENST00000379540 PLXNC1O60486 1568 aa9.3□□□□□ -0.92
NFX1-203ENST00000379540 MSNP26038 577 aaKnown RBP9.3□□□□□ -0.92
NFX1-203ENST00000379540 ST18O60284 1047 aa9.29□□□□□ -0.92
NFX1-203ENST00000379540 PHF14O94880 888 aa9.29□□□□□ -0.92
NFX1-203ENST00000379540 RUFY2Q8WXA3 655 aa9.29□□□□□ -0.92
NFX1-203ENST00000379540 API5Q9BZZ5 524 aaKnown RBP9.29□□□□□ -0.92
NFX1-203ENST00000379540 ARAP3Q8WWN8 1544 aa9.29□□□□□ -0.92
NFX1-203ENST00000379540 HSP90AB4PQ58FF6 505 aa9.29□□□□□ -0.92
NFX1-203ENST00000379540 FRAT2O75474 233 aaPredicted RBP9.29□□□□□ -0.92
NFX1-203ENST00000379540 CYB5RLQ6IPT4 315 aa9.29□□□□□ -0.92
NFX1-203ENST00000379540 CHMP3Q9Y3E7 222 aa9.29□□□□□ -0.92
NFX1-203ENST00000379540 TULP1O00294 542 aaPredicted RBP9.28□□□□□ -0.92
NFX1-203ENST00000379540 CLSTN1O94985 981 aa9.28□□□□□ -0.92
NFX1-203ENST00000379540 DUOX2Q9NRD8 1548 aa9.28□□□□□ -0.92
NFX1-203ENST00000379540 SCAPERQ9BY12 1400 aa9.28□□□□□ -0.92
NFX1-203ENST00000379540 TRAK1Q9UPV9 953 aa9.28□□□□□ -0.92
NFX1-203ENST00000379540 CNTLNQ9NXG0 1405 aa9.28□□□□□ -0.92
NFX1-203ENST00000379540 DRC7Q8IY82 874 aa9.28□□□□□ -0.92
NFX1-203ENST00000379540 KIF16BQ96L93 1317 aa9.27□□□□□ -0.93
NFX1-203ENST00000379540 RTN4Q9NQC3 1192 aaKnown RBP9.27□□□□□ -0.93
NFX1-203ENST00000379540 ERBINQ96RT1 1412 aa9.27□□□□□ -0.93
NFX1-203ENST00000379540 FAM135AQ9P2D6 1515 aa9.27□□□□□ -0.93
NFX1-203ENST00000379540 CCDC7Q96M83 1385 aa9.27□□□□□ -0.93
NFX1-203ENST00000379540 UNC13BO14795 1591 aa9.27□□□□□ -0.93
NFX1-203ENST00000379540 ATF3P18847 181 aa9.27□□□□□ -0.93
NFX1-203ENST00000379540 SYNE3Q6ZMZ3 975 aa9.27□□□□□ -0.93
NFX1-203ENST00000379540 ZKSCAN2Q63HK3 967 aa9.26□□□□□ -0.93
NFX1-203ENST00000379540 FAM69CQ0P6D2 419 aa9.26□□□□□ -0.93
NFX1-203ENST00000379540 NBPF8Q3BBV2 869 aa9.26□□□□□ -0.93
NFX1-203ENST00000379540 ABCC1P33527 1531 aa9.26□□□□□ -0.93
NFX1-203ENST00000379540 TRIM6-TRIM34B2RNG4 842 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms