RNA–Protein interactions for RNA: ENST00000379205.4

C4orf46-201, Transcript of chromosome 4 open reading frame 46, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C4orf46, Length 3,521 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf46-201ENST00000379205 PRDM10Q9NQV6 1147 aa12.44□□□□□ -0.42
C4orf46-201ENST00000379205 THOC2Q8NI27 1593 aaKnown RBP12.44□□□□□ -0.42
C4orf46-201ENST00000379205 DNTTIP2Q5QJE6 756 aaKnown RBP12.44□□□□□ -0.42
C4orf46-201ENST00000379205 PZPP20742 1482 aa12.44□□□□□ -0.42
C4orf46-201ENST00000379205 CCDC144AA2RUR9 1427 aa12.44□□□□□ -0.42
C4orf46-201ENST00000379205 DDX11L8A8MPP1 907 aa12.43□□□□□ -0.42
C4orf46-201ENST00000379205 GOLGA6L22H0YM25 854 aa12.43□□□□□ -0.42
C4orf46-201ENST00000379205 U2SURPO15042 1029 aaKnown RBP12.43□□□□□ -0.42
C4orf46-201ENST00000379205 GBP4Q96PP9 640 aa12.43□□□□□ -0.42
C4orf46-201ENST00000379205 ANTXR1Q9H6X2 564 aa12.43□□□□□ -0.42
C4orf46-201ENST00000379205 SMC4Q9NTJ3 1288 aa12.43□□□□□ -0.42
C4orf46-201ENST00000379205 FOXD4L6Q3SYB3 417 aaPredicted RBP12.42□□□□□ -0.42
C4orf46-201ENST00000379205 AMER1Q5JTC6 1135 aaPredicted RBP12.42□□□□□ -0.42
C4orf46-201ENST00000379205 FOXD4L3Q6VB84 417 aaPredicted RBP12.42□□□□□ -0.42
C4orf46-201ENST00000379205 GAS2L3Q86XJ1 694 aa12.42□□□□□ -0.42
C4orf46-201ENST00000379205 DNMBPQ6XZF7 1577 aa12.42□□□□□ -0.42
C4orf46-201ENST00000379205 MORC1Q86VD1 984 aa12.42□□□□□ -0.42
C4orf46-201ENST00000379205 APBB1O00213 710 aa12.42□□□□□ -0.42
C4orf46-201ENST00000379205 CHMP7Q8WUX9 453 aaPredicted RBP12.42□□□□□ -0.42
C4orf46-201ENST00000379205 TESK2Q96S53 571 aa12.42□□□□□ -0.42
C4orf46-201ENST00000379205 ROCK1Q13464 1354 aa12.42□□□□□ -0.42
C4orf46-201ENST00000379205 PTMAP06454 111 aaKnown RBP12.41□□□□□ -0.42
C4orf46-201ENST00000379205 U2AF1L5P0DN76 240 aaPredicted RBP12.41□□□□□ -0.42
C4orf46-201ENST00000379205 NASPP49321 788 aaPredicted RBP12.41□□□□□ -0.42
C4orf46-201ENST00000379205 U2AF1Q01081 240 aaKnown RBP eCLIP12.41□□□□□ -0.42
C4orf46-201ENST00000379205 TSR2Q969E8 191 aaKnown RBP12.41□□□□□ -0.42
C4orf46-201ENST00000379205 TOPBP1Q92547 1522 aa12.41□□□□□ -0.42
C4orf46-201ENST00000379205 PDE3AQ14432 1141 aa12.41□□□□□ -0.42
C4orf46-201ENST00000379205 TNPO1Q92973 898 aaKnown RBP12.41□□□□□ -0.42
C4orf46-201ENST00000379205 WWC1Q8IX03 1113 aa12.4□□□□□ -0.42
C4orf46-201ENST00000379205 TCP11L2Q8N4U5 519 aa12.4□□□□□ -0.42
C4orf46-201ENST00000379205 KIF21AQ7Z4S6 1674 aa12.4□□□□□ -0.43
C4orf46-201ENST00000379205 XPCQ01831 940 aaPredicted RBP12.39□□□□□ -0.43
C4orf46-201ENST00000379205 PLCB2Q00722 1185 aa12.39□□□□□ -0.43
C4orf46-201ENST00000379205 RBM42Q9BTD8 480 aaKnown RBP12.39□□□□□ -0.43
C4orf46-201ENST00000379205 ERBINQ96RT1 1412 aa12.39□□□□□ -0.43
C4orf46-201ENST00000379205 CDCA8Q53HL2 280 aa12.38□□□□□ -0.43
C4orf46-201ENST00000379205 RNF214Q8ND24 703 aa12.38□□□□□ -0.43
C4orf46-201ENST00000379205 TCOF1Q13428 1488 aaKnown RBP12.38□□□□□ -0.43
C4orf46-201ENST00000379205 SAFB2Q14151 953 aaKnown RBP eCLIP12.38□□□□□ -0.43
C4orf46-201ENST00000379205 MCTP1Q6DN14 999 aa12.38□□□□□ -0.43
C4orf46-201ENST00000379205 ABCA10Q8WWZ4 1543 aa12.38□□□□□ -0.43
C4orf46-201ENST00000379205 RARSP54136 660 aaKnown RBP12.38□□□□□ -0.43
C4orf46-201ENST00000379205 CAVIN1Q6NZI2 390 aaKnown RBP12.38□□□□□ -0.43
C4orf46-201ENST00000379205 ELL2O00472 640 aaPredicted RBP12.37□□□□□ -0.43
C4orf46-201ENST00000379205 RALGAPBQ86X10 1494 aa12.37□□□□□ -0.43
C4orf46-201ENST00000379205 FSD2A1L4K1 749 aa12.37□□□□□ -0.43
C4orf46-201ENST00000379205 ANKRD45Q5TZF3 282 aa12.37□□□□□ -0.43
C4orf46-201ENST00000379205 ZHX1Q9UKY1 873 aaPredicted RBP12.37□□□□□ -0.43
C4orf46-201ENST00000379205 SSFA2P28290 1259 aa12.37□□□□□ -0.43
C4orf46-201ENST00000379205 DZIP1LQ8IYY4 767 aaKnown RBP12.37□□□□□ -0.43
C4orf46-201ENST00000379205 NKTRP30414 1462 aaKnown RBP12.36□□□□□ -0.43
C4orf46-201ENST00000379205 KDM5CP41229 1560 aa12.36□□□□□ -0.43
C4orf46-201ENST00000379205 CALD1Q05682 793 aaKnown RBP12.36□□□□□ -0.43
C4orf46-201ENST00000379205 NOL8Q76FK4 1167 aaKnown RBP12.36□□□□□ -0.43
C4orf46-201ENST00000379205 C1orf115Q9H7X2 142 aa12.36□□□□□ -0.43
C4orf46-201ENST00000379205 URB2Q14146 1524 aaKnown RBP12.36□□□□□ -0.43
C4orf46-201ENST00000379205 ZKSCAN2Q63HK3 967 aa12.36□□□□□ -0.43
C4orf46-201ENST00000379205 EIF3AQ14152 1382 aaKnown RBP12.35□□□□□ -0.43
C4orf46-201ENST00000379205 GCC2Q8IWJ2 1684 aa12.34□□□□□ -0.43
C4orf46-201ENST00000379205 TPM2P07951 284 aa12.34□□□□□ -0.43
C4orf46-201ENST00000379205 BCL11BQ9C0K0 894 aaPredicted RBP12.34□□□□□ -0.43
C4orf46-201ENST00000379205 PDCL3Q9H2J4 239 aa12.34□□□□□ -0.43
C4orf46-201ENST00000379205 BLMP54132 1417 aaPredicted RBP12.33□□□□□ -0.44
C4orf46-201ENST00000379205 KIAA0586Q9BVV6 1533 aa12.33□□□□□ -0.44
C4orf46-201ENST00000379205 CAMSAP2Q08AD1 1489 aa12.33□□□□□ -0.44
C4orf46-201ENST00000379205 UQCRHLA0A096LP55 91 aa12.32□□□□□ -0.44
C4orf46-201ENST00000379205 UQCRHP07919 91 aa12.32□□□□□ -0.44
C4orf46-201ENST00000379205 EXOSC9Q06265 439 aaKnown RBP12.32□□□□□ -0.44
C4orf46-201ENST00000379205 ZMYM4Q5VZL5 1548 aa12.32□□□□□ -0.44
C4orf46-201ENST00000379205 MTHFSP49914 203 aa12.32□□□□□ -0.44
C4orf46-201ENST00000379205 ZSCAN30Q86W11 494 aa12.32□□□□□ -0.44
C4orf46-201ENST00000379205 TRAK1Q9UPV9 953 aa12.32□□□□□ -0.44
C4orf46-201ENST00000379205 NUTM2DQ5VT03 806 aaPredicted RBP12.31□□□□□ -0.44
C4orf46-201ENST00000379205 CHAMP1Q96JM3 812 aa12.31□□□□□ -0.44
C4orf46-201ENST00000379205 CFAP53Q96M91 514 aa12.31□□□□□ -0.44
C4orf46-201ENST00000379205 ABCA5Q8WWZ7 1642 aa12.31□□□□□ -0.44
C4orf46-201ENST00000379205 MVPQ14764 893 aaKnown RBP12.31□□□□□ -0.44
C4orf46-201ENST00000379205 CFAP70Q5T0N1 1121 aa12.31□□□□□ -0.44
C4orf46-201ENST00000379205 LRRIQ1Q96JM4 1722 aa12.31□□□□□ -0.44
C4orf46-201ENST00000379205 ZNF521Q96K83 1311 aa12.31□□□□□ -0.44
C4orf46-201ENST00000379205 PRPF40AO75400 957 aaKnown RBP12.31□□□□□ -0.44
C4orf46-201ENST00000379205 RBM27Q9P2N5 1060 aaKnown RBP12.31□□□□□ -0.44
C4orf46-201ENST00000379205 C9orf84Q5VXU9 1444 aa12.3□□□□□ -0.44
C4orf46-201ENST00000379205 CTTNBP2Q8WZ74 1663 aa12.3□□□□□ -0.44
C4orf46-201ENST00000379205 SLC12A5Q9H2X9 1139 aa12.3□□□□□ -0.44
C4orf46-201ENST00000379205 FAM177BA6PVY3 158 aa12.3□□□□□ -0.44
C4orf46-201ENST00000379205 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.3□□□□□ -0.44
C4orf46-201ENST00000379205 SKOR2Q2VWA4 1001 aaPredicted RBP12.29□□□□□ -0.44
C4orf46-201ENST00000379205 RUNDC1Q96C34 613 aa12.29□□□□□ -0.44
C4orf46-201ENST00000379205 CCDC173Q0VFZ6 552 aa12.29□□□□□ -0.44
C4orf46-201ENST00000379205 NOB1Q9ULX3 412 aaKnown RBP12.29□□□□□ -0.44
C4orf46-201ENST00000379205 TSC1Q92574 1164 aa12.29□□□□□ -0.44
C4orf46-201ENST00000379205 ZNF608Q9ULD9 1512 aaPredicted RBP12.29□□□□□ -0.44
C4orf46-201ENST00000379205 CD2BP2O95400 341 aaKnown RBP12.28□□□□□ -0.44
C4orf46-201ENST00000379205 MBD5Q9P267 1494 aa12.28□□□□□ -0.44
C4orf46-201ENST00000379205 KIF14Q15058 1648 aa12.28□□□□□ -0.44
C4orf46-201ENST00000379205 TMEM57Q8N5G2 664 aa12.28□□□□□ -0.44
C4orf46-201ENST00000379205 WDR62O43379 1518 aa12.27□□□□□ -0.44
C4orf46-201ENST00000379205 PRAG1Q86YV5 1406 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms