RNA–Protein interactions for RNA: ENST00000376757.9

SSH3-203, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 2 BASIC

Gene SSH3, Length 2,990 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-203ENST00000376757 COG6Q9Y2V7 657 aa20.51■□□□□ 0.87
SSH3-203ENST00000376757 GPRASP1Q5JY77 1395 aa20.51■□□□□ 0.87
SSH3-203ENST00000376757 ARHGAP5Q13017 1502 aa20.51■□□□□ 0.87
SSH3-203ENST00000376757 SLFN5Q08AF3 891 aa20.5■□□□□ 0.87
SSH3-203ENST00000376757 SLKQ9H2G2 1235 aaPredicted RBP20.5■□□□□ 0.87
SSH3-203ENST00000376757 WASHC2CQ9Y4E1 1318 aa20.49■□□□□ 0.87
SSH3-203ENST00000376757 PRKCSHP14314 528 aaPredicted RBP20.49■□□□□ 0.87
SSH3-203ENST00000376757 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.48■□□□□ 0.87
SSH3-203ENST00000376757 TNNQ9UQP3 1299 aa20.48■□□□□ 0.87
SSH3-203ENST00000376757 SPRYD3Q8NCJ5 442 aa20.46■□□□□ 0.87
SSH3-203ENST00000376757 PRDM15P57071 1507 aaPredicted RBP20.46■□□□□ 0.87
SSH3-203ENST00000376757 WDR7Q9Y4E6 1490 aa20.46■□□□□ 0.87
SSH3-203ENST00000376757 AFAP1Q8N556 730 aa20.46■□□□□ 0.87
SSH3-203ENST00000376757 ZNF521Q96K83 1311 aa20.46■□□□□ 0.87
SSH3-203ENST00000376757 NUP160Q12769 1436 aa20.45■□□□□ 0.86
SSH3-203ENST00000376757 CDC42BPBQ9Y5S2 1711 aa20.45■□□□□ 0.86
SSH3-203ENST00000376757 EIF5BO60841 1220 aaKnown RBP20.45■□□□□ 0.86
SSH3-203ENST00000376757 CLUAP1Q96AJ1 413 aa20.45■□□□□ 0.86
SSH3-203ENST00000376757 CFAP70Q5T0N1 1121 aa20.44■□□□□ 0.86
SSH3-203ENST00000376757 MYO5CQ9NQX4 1742 aa20.41■□□□□ 0.86
SSH3-203ENST00000376757 RSPH4AQ5TD94 716 aa20.4■□□□□ 0.86
SSH3-203ENST00000376757 ARHGEF5Q12774 1597 aa20.4■□□□□ 0.86
SSH3-203ENST00000376757 TTC37Q6PGP7 1564 aa20.4■□□□□ 0.86
SSH3-203ENST00000376757 CHGAP10645 457 aaKnown RBP20.4■□□□□ 0.86
SSH3-203ENST00000376757 CARD14Q9BXL6 1004 aa20.4■□□□□ 0.86
SSH3-203ENST00000376757 POGKQ9P215 609 aa20.39■□□□□ 0.85
SSH3-203ENST00000376757 CENPJQ9HC77 1338 aaPredicted RBP20.35■□□□□ 0.85
SSH3-203ENST00000376757 USP19O94966 1318 aa20.34■□□□□ 0.85
SSH3-203ENST00000376757 RLBP1P12271 317 aa20.34■□□□□ 0.85
SSH3-203ENST00000376757 E9PSI1 815 aa20.33■□□□□ 0.85
SSH3-203ENST00000376757 NKTRP30414 1462 aaKnown RBP20.33■□□□□ 0.84
SSH3-203ENST00000376757 PREX2Q70Z35 1606 aa20.33■□□□□ 0.84
SSH3-203ENST00000376757 TRAPPC8Q9Y2L5 1435 aa20.32■□□□□ 0.84
SSH3-203ENST00000376757 ADGRF5Q8IZF2 1346 aa20.32■□□□□ 0.84
SSH3-203ENST00000376757 CDCA8Q53HL2 280 aa20.32■□□□□ 0.84
SSH3-203ENST00000376757 WWC1Q8IX03 1113 aa20.32■□□□□ 0.84
SSH3-203ENST00000376757 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.32■□□□□ 0.84
SSH3-203ENST00000376757 NUTM2DQ5VT03 806 aaPredicted RBP20.31■□□□□ 0.84
SSH3-203ENST00000376757 TRMT2AQ8IZ69 625 aaKnown RBP20.31■□□□□ 0.84
SSH3-203ENST00000376757 KIF3BO15066 747 aa20.31■□□□□ 0.84
SSH3-203ENST00000376757 TRAK1Q9UPV9 953 aa20.31■□□□□ 0.84
SSH3-203ENST00000376757 SPAG9O60271 1321 aaKnown RBP20.3■□□□□ 0.84
SSH3-203ENST00000376757 ASXL1Q8IXJ9 1541 aa20.3■□□□□ 0.84
SSH3-203ENST00000376757 PCDHB15Q9Y5E8 787 aa20.3■□□□□ 0.84
SSH3-203ENST00000376757 SLC12A5Q9H2X9 1139 aa20.3■□□□□ 0.84
SSH3-203ENST00000376757 EFCAB2Q5VUJ9 269 aa20.28■□□□□ 0.84
SSH3-203ENST00000376757 GZF1Q9H116 711 aaPredicted RBP20.28■□□□□ 0.84
SSH3-203ENST00000376757 UNC13BO14795 1591 aa20.28■□□□□ 0.84
SSH3-203ENST00000376757 TMEM132EQ6IEE7 984 aa20.27■□□□□ 0.84
SSH3-203ENST00000376757 MORC1Q86VD1 984 aa20.27■□□□□ 0.83
SSH3-203ENST00000376757 EIF2AK4Q9P2K8 1649 aaKnown RBP20.27■□□□□ 0.83
SSH3-203ENST00000376757 SCAF11Q99590 1463 aaKnown RBP20.26■□□□□ 0.83
SSH3-203ENST00000376757 SAFB2Q14151 953 aaKnown RBP eCLIP20.26■□□□□ 0.83
SSH3-203ENST00000376757 TCP11L2Q8N4U5 519 aa20.26■□□□□ 0.83
SSH3-203ENST00000376757 ERCC6L2Q5T890 1561 aa20.25■□□□□ 0.83
SSH3-203ENST00000376757 INSRP06213 1382 aa20.25■□□□□ 0.83
SSH3-203ENST00000376757 EIF3AQ14152 1382 aaKnown RBP20.25■□□□□ 0.83
SSH3-203ENST00000376757 IQGAP3Q86VI3 1631 aa20.25■□□□□ 0.83
SSH3-203ENST00000376757 UGGT1Q9NYU2 1555 aa20.24■□□□□ 0.83
SSH3-203ENST00000376757 PDZRN3Q9UPQ7 1066 aa20.23■□□□□ 0.83
SSH3-203ENST00000376757 CGNL1Q0VF96 1302 aa20.23■□□□□ 0.83
SSH3-203ENST00000376757 PIK3C2GO75747 1445 aa20.23■□□□□ 0.83
SSH3-203ENST00000376757 MAST1Q9Y2H9 1570 aa20.23■□□□□ 0.83
SSH3-203ENST00000376757 RARSP54136 660 aaKnown RBP20.22■□□□□ 0.83
SSH3-203ENST00000376757 DUOX2Q9NRD8 1548 aa20.22■□□□□ 0.83
SSH3-203ENST00000376757 TSR2Q969E8 191 aaKnown RBP20.22■□□□□ 0.83
SSH3-203ENST00000376757 MADDQ8WXG6 1647 aa20.21■□□□□ 0.83
SSH3-203ENST00000376757 ATP10AO60312 1499 aa20.21■□□□□ 0.83
SSH3-203ENST00000376757 MTHFSP49914 203 aa20.2■□□□□ 0.82
SSH3-203ENST00000376757 LAMC1P11047 1609 aa20.2■□□□□ 0.82
SSH3-203ENST00000376757 PDE3AQ14432 1141 aa20.19■□□□□ 0.82
SSH3-203ENST00000376757 MFAP1P55081 439 aaKnown RBP20.18■□□□□ 0.82
SSH3-203ENST00000376757 BECN1Q14457 450 aa20.18■□□□□ 0.82
SSH3-203ENST00000376757 RNF17Q9BXT8 1623 aaKnown RBP20.18■□□□□ 0.82
SSH3-203ENST00000376757 TBC1D2Q9BYX2 928 aa20.18■□□□□ 0.82
SSH3-203ENST00000376757 U2AF1L5P0DN76 240 aaPredicted RBP20.17■□□□□ 0.82
SSH3-203ENST00000376757 U2AF1Q01081 240 aaKnown RBP eCLIP20.17■□□□□ 0.82
SSH3-203ENST00000376757 NSD3Q9BZ95 1437 aa20.17■□□□□ 0.82
SSH3-203ENST00000376757 SYNMO15061 1565 aa20.16■□□□□ 0.82
SSH3-203ENST00000376757 MAPK8IP3Q9UPT6 1336 aa20.16■□□□□ 0.82
SSH3-203ENST00000376757 UPF2Q9HAU5 1272 aaKnown RBP20.16■□□□□ 0.82
SSH3-203ENST00000376757 ERVK-7P63135 1459 aa20.15■□□□□ 0.82
SSH3-203ENST00000376757 IQGAP1P46940 1657 aa20.15■□□□□ 0.82
SSH3-203ENST00000376757 CLTCL1P53675 1640 aa20.15■□□□□ 0.82
SSH3-203ENST00000376757 MYOM1P52179 1685 aa20.14■□□□□ 0.81
SSH3-203ENST00000376757 FTSJ3Q8IY81 847 aaKnown RBP20.14■□□□□ 0.81
SSH3-203ENST00000376757 U2SURPO15042 1029 aaKnown RBP20.13■□□□□ 0.81
SSH3-203ENST00000376757 RUNDC1Q96C34 613 aa20.13■□□□□ 0.81
SSH3-203ENST00000376757 CFAP65Q6ZU64 1925 aaKnown RBP20.13■□□□□ 0.81
SSH3-203ENST00000376757 PLCH2O75038 1416 aa20.12■□□□□ 0.81
SSH3-203ENST00000376757 SCAPERQ9BY12 1400 aa20.12■□□□□ 0.81
SSH3-203ENST00000376757 PLXNC1O60486 1568 aa20.12■□□□□ 0.81
SSH3-203ENST00000376757 PANK2Q9BZ23 570 aa20.11■□□□□ 0.81
SSH3-203ENST00000376757 ABCC2Q92887 1545 aa20.1■□□□□ 0.81
SSH3-203ENST00000376757 PMFBP1Q8TBY8 1022 aa20.1■□□□□ 0.81
SSH3-203ENST00000376757 RRAGDQ9NQL2 400 aaPredicted RBP20.1■□□□□ 0.81
SSH3-203ENST00000376757 GGT6Q6P531 493 aa20.1■□□□□ 0.81
SSH3-203ENST00000376757 TBC1D32Q96NH3 1257 aa20.1■□□□□ 0.81
SSH3-203ENST00000376757 ITPRIPQ8IWB1 547 aa20.09■□□□□ 0.81
SSH3-203ENST00000376757 ANTXR1Q9H6X2 564 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms