RNA–Protein interactions for RNA: ENST00000376569.7

DDR1-226, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,783 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-226ENST00000376569 UPF2Q9HAU5 1272 aaKnown RBP16.34■□□□□ 0.21
DDR1-226ENST00000376569 SMG6Q86US8 1419 aaKnown RBP16.34■□□□□ 0.21
DDR1-226ENST00000376569 TRAPPC8Q9Y2L5 1435 aa16.34■□□□□ 0.21
DDR1-226ENST00000376569 SPATA31E1Q6ZUB1 1445 aa16.32■□□□□ 0.2
DDR1-226ENST00000376569 ITPRIPQ8IWB1 547 aa16.32■□□□□ 0.2
DDR1-226ENST00000376569 EIF3AQ14152 1382 aaKnown RBP16.32■□□□□ 0.2
DDR1-226ENST00000376569 TCP11L2Q8N4U5 519 aa16.32■□□□□ 0.2
DDR1-226ENST00000376569 PER1O15534 1290 aaPredicted RBP16.32■□□□□ 0.2
DDR1-226ENST00000376569 HSP90AA1P07900 732 aaKnown RBP16.32■□□□□ 0.2
DDR1-226ENST00000376569 TSR2Q969E8 191 aaKnown RBP16.32■□□□□ 0.2
DDR1-226ENST00000376569 SMC4Q9NTJ3 1288 aa16.32■□□□□ 0.2
DDR1-226ENST00000376569 HMOX1P09601 288 aa16.31■□□□□ 0.2
DDR1-226ENST00000376569 FAM69CQ0P6D2 419 aa16.31■□□□□ 0.2
DDR1-226ENST00000376569 DNMT1P26358 1616 aaKnown RBP16.31■□□□□ 0.2
DDR1-226ENST00000376569 FBXO31Q5XUX0 539 aaPredicted RBP16.29■□□□□ 0.2
DDR1-226ENST00000376569 LMOD2Q6P5Q4 547 aa16.28■□□□□ 0.2
DDR1-226ENST00000376569 CFAP65Q6ZU64 1925 aaKnown RBP16.28■□□□□ 0.2
DDR1-226ENST00000376569 SPINK5Q9NQ38 1064 aaPredicted RBP16.27■□□□□ 0.2
DDR1-226ENST00000376569 VGFO15240 615 aaPredicted RBP16.27■□□□□ 0.2
DDR1-226ENST00000376569 FAM135AQ9P2D6 1515 aa16.26■□□□□ 0.19
DDR1-226ENST00000376569 PRAM1Q96QH2 718 aa16.26■□□□□ 0.19
DDR1-226ENST00000376569 NUP160Q12769 1436 aa16.25■□□□□ 0.19
DDR1-226ENST00000376569 PRAG1Q86YV5 1406 aa16.25■□□□□ 0.19
DDR1-226ENST00000376569 CGNL1Q0VF96 1302 aa16.25■□□□□ 0.19
DDR1-226ENST00000376569 TPRNQ4KMQ1 711 aa16.25■□□□□ 0.19
DDR1-226ENST00000376569 HDGFL2Q7Z4V5 671 aaPredicted RBP16.25■□□□□ 0.19
DDR1-226ENST00000376569 E9PSI1 815 aa16.25■□□□□ 0.19
DDR1-226ENST00000376569 DDRGK1Q96HY6 314 aa16.24■□□□□ 0.19
DDR1-226ENST00000376569 DMRT2Q9Y5R5 561 aa16.24■□□□□ 0.19
DDR1-226ENST00000376569 EVC2Q86UK5 1308 aa16.23■□□□□ 0.19
DDR1-226ENST00000376569 AMER1Q5JTC6 1135 aaPredicted RBP16.23■□□□□ 0.19
DDR1-226ENST00000376569 CARD14Q9BXL6 1004 aa16.23■□□□□ 0.19
DDR1-226ENST00000376569 WAPLQ7Z5K2 1190 aa16.23■□□□□ 0.19
DDR1-226ENST00000376569 TNNQ9UQP3 1299 aa16.23■□□□□ 0.19
DDR1-226ENST00000376569 MFAP1P55081 439 aaKnown RBP16.22■□□□□ 0.19
DDR1-226ENST00000376569 RALGAPBQ86X10 1494 aa16.22■□□□□ 0.19
DDR1-226ENST00000376569 TRHP20396 242 aaPredicted RBP16.21■□□□□ 0.19
DDR1-226ENST00000376569 RIPK4P57078 832 aa16.21■□□□□ 0.19
DDR1-226ENST00000376569 IDI1Q13907 227 aa16.21■□□□□ 0.19
DDR1-226ENST00000376569 THUMPD2Q9BTF0 503 aaKnown RBP16.21■□□□□ 0.19
DDR1-226ENST00000376569 DUSP27Q5VZP5 1158 aa16.21■□□□□ 0.19
DDR1-226ENST00000376569 LTV1Q96GA3 475 aaPredicted RBP16.21■□□□□ 0.19
DDR1-226ENST00000376569 CABP1Q9NZU7 370 aa16.21■□□□□ 0.19
DDR1-226ENST00000376569 BCORL1Q5H9F3 1711 aa16.21■□□□□ 0.18
DDR1-226ENST00000376569 FOXD4L1Q9NU39 408 aa16.21■□□□□ 0.18
DDR1-226ENST00000376569 TERF2IPQ9NYB0 399 aa16.21■□□□□ 0.18
DDR1-226ENST00000376569 CENPQQ7L2Z9 268 aaPredicted RBP16.2■□□□□ 0.18
DDR1-226ENST00000376569 EIF5BO60841 1220 aaKnown RBP16.2■□□□□ 0.18
DDR1-226ENST00000376569 GZF1Q9H116 711 aaPredicted RBP16.2■□□□□ 0.18
DDR1-226ENST00000376569 A2MP01023 1474 aa16.19■□□□□ 0.18
DDR1-226ENST00000376569 TXNDC2Q86VQ3 553 aa16.19■□□□□ 0.18
DDR1-226ENST00000376569 BACH2Q9BYV9 841 aa16.19■□□□□ 0.18
DDR1-226ENST00000376569 RUNDC1Q96C34 613 aa16.18■□□□□ 0.18
DDR1-226ENST00000376569 NUTM2GQ5VZR2 741 aa16.18■□□□□ 0.18
DDR1-226ENST00000376569 MYH16Q9H6N6 1097 aa16.18■□□□□ 0.18
DDR1-226ENST00000376569 SLFN5Q08AF3 891 aa16.18■□□□□ 0.18
DDR1-226ENST00000376569 WWC1Q8IX03 1113 aa16.18■□□□□ 0.18
DDR1-226ENST00000376569 ERCC6L2Q5T890 1561 aa16.18■□□□□ 0.18
DDR1-226ENST00000376569 ADGRL1O94910 1474 aa16.18■□□□□ 0.18
DDR1-226ENST00000376569 PLEKHH1Q9ULM0 1364 aa16.18■□□□□ 0.18
DDR1-226ENST00000376569 EXOSC9Q06265 439 aaKnown RBP16.17■□□□□ 0.18
DDR1-226ENST00000376569 MBD5Q9P267 1494 aa16.17■□□□□ 0.18
DDR1-226ENST00000376569 FANCAO15360 1455 aa16.17■□□□□ 0.18
DDR1-226ENST00000376569 FAM161AQ3B820 660 aa16.17■□□□□ 0.18
DDR1-226ENST00000376569 NSD3Q9BZ95 1437 aa16.16■□□□□ 0.18
DDR1-226ENST00000376569 NOS1P29475 1434 aa16.16■□□□□ 0.18
DDR1-226ENST00000376569 NECTIN2Q92692 538 aa16.16■□□□□ 0.18
DDR1-226ENST00000376569 ITSN2Q9NZM3 1697 aa16.16■□□□□ 0.18
DDR1-226ENST00000376569 PLCH2O75038 1416 aa16.16■□□□□ 0.18
DDR1-226ENST00000376569 C1orf115Q9H7X2 142 aa16.15■□□□□ 0.18
DDR1-226ENST00000376569 PARD3Q8TEW0 1356 aa16.15■□□□□ 0.18
DDR1-226ENST00000376569 ABCC10Q5T3U5 1492 aa16.14■□□□□ 0.18
DDR1-226ENST00000376569 DIAPH1O60610 1272 aaKnown RBP16.13■□□□□ 0.17
DDR1-226ENST00000376569 BECN1Q14457 450 aa16.13■□□□□ 0.17
DDR1-226ENST00000376569 ZNF428Q96B54 188 aa16.13■□□□□ 0.17
DDR1-226ENST00000376569 RRS1Q15050 365 aaKnown RBP16.12■□□□□ 0.17
DDR1-226ENST00000376569 SLC4A10Q6U841 1118 aa16.12■□□□□ 0.17
DDR1-226ENST00000376569 RWDD1Q9H446 243 aaPredicted RBP16.12■□□□□ 0.17
DDR1-226ENST00000376569 CDK19Q9BWU1 502 aa16.12■□□□□ 0.17
DDR1-226ENST00000376569 KDM5CP41229 1560 aa16.12■□□□□ 0.17
DDR1-226ENST00000376569 POLR1AO95602 1720 aaPredicted RBP16.12■□□□□ 0.17
DDR1-226ENST00000376569 IGHDP01880 384 aa16.12■□□□□ 0.17
DDR1-226ENST00000376569 LNPKQ9C0E8 428 aa16.12■□□□□ 0.17
DDR1-226ENST00000376569 CD109Q6YHK3 1445 aa16.11■□□□□ 0.17
DDR1-226ENST00000376569 ADGRL2O95490 1459 aa16.11■□□□□ 0.17
DDR1-226ENST00000376569 PRKAR2BP31323 418 aa16.11■□□□□ 0.17
DDR1-226ENST00000376569 RBM33Q96EV2 1170 aaKnown RBP16.11■□□□□ 0.17
DDR1-226ENST00000376569 RNF123Q5XPI4 1314 aa16.11■□□□□ 0.17
DDR1-226ENST00000376569 ZKSCAN2Q63HK3 967 aa16.1■□□□□ 0.17
DDR1-226ENST00000376569 SLC26A8Q96RN1 970 aa16.1■□□□□ 0.17
DDR1-226ENST00000376569 ADGBQ8N7X0 1667 aa16.1■□□□□ 0.17
DDR1-226ENST00000376569 PLA2R1Q13018 1463 aa16.1■□□□□ 0.17
DDR1-226ENST00000376569 NCKAP5LQ9HCH0 1330 aa16.09■□□□□ 0.17
DDR1-226ENST00000376569 DCTN1Q14203 1278 aa16.09■□□□□ 0.17
DDR1-226ENST00000376569 PMFBP1Q8TBY8 1022 aa16.09■□□□□ 0.17
DDR1-226ENST00000376569 DZIP1LQ8IYY4 767 aaKnown RBP16.09■□□□□ 0.17
DDR1-226ENST00000376569 ANKRD45Q5TZF3 282 aa16.08■□□□□ 0.16
DDR1-226ENST00000376569 MS4A1P11836 297 aa16.07■□□□□ 0.16
DDR1-226ENST00000376569 ZRANB1Q9UGI0 708 aa16.07■□□□□ 0.16
DDR1-226ENST00000376569 PDZRN3Q9UPQ7 1066 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms