RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 BACH2Q9BYV9 841 aa19.16■□□□□ 0.66
MSH5-201ENST00000375703 KANK1Q14678 1352 aa19.16■□□□□ 0.66
MSH5-201ENST00000375703 IQGAP1P46940 1657 aa19.16■□□□□ 0.66
MSH5-201ENST00000375703 KIF3BO15066 747 aa19.14■□□□□ 0.65
MSH5-201ENST00000375703 DEKP35659 375 aaKnown RBP19.14■□□□□ 0.65
MSH5-201ENST00000375703 ZFYVE16Q7Z3T8 1539 aa19.14■□□□□ 0.65
MSH5-201ENST00000375703 PLEKHH1Q9ULM0 1364 aa19.13■□□□□ 0.65
MSH5-201ENST00000375703 DUSP27Q5VZP5 1158 aa19.13■□□□□ 0.65
MSH5-201ENST00000375703 EIF3AQ14152 1382 aaKnown RBP19.13■□□□□ 0.65
MSH5-201ENST00000375703 GOLGA2Q08379 1002 aa19.13■□□□□ 0.65
MSH5-201ENST00000375703 C20orf194Q5TEA3 1177 aa19.13■□□□□ 0.65
MSH5-201ENST00000375703 CLTCL1P53675 1640 aa19.13■□□□□ 0.65
MSH5-201ENST00000375703 SPHKAPQ2M3C7 1700 aa19.12■□□□□ 0.65
MSH5-201ENST00000375703 ARAP3Q8WWN8 1544 aa19.12■□□□□ 0.65
MSH5-201ENST00000375703 CEP152O94986 1710 aa19.12■□□□□ 0.65
MSH5-201ENST00000375703 ASXL1Q8IXJ9 1541 aa19.12■□□□□ 0.65
MSH5-201ENST00000375703 SYNMO15061 1565 aa19.12■□□□□ 0.65
MSH5-201ENST00000375703 CLASP1Q7Z460 1538 aa19.11■□□□□ 0.65
MSH5-201ENST00000375703 ZNF521Q96K83 1311 aa19.1■□□□□ 0.65
MSH5-201ENST00000375703 SLC24A1O60721 1099 aa19.1■□□□□ 0.65
MSH5-201ENST00000375703 NPC1L1Q9UHC9 1359 aa19.1■□□□□ 0.65
MSH5-201ENST00000375703 CFAP70Q5T0N1 1121 aa19.09■□□□□ 0.65
MSH5-201ENST00000375703 PIK3C2GO75747 1445 aa19.09■□□□□ 0.65
MSH5-201ENST00000375703 TET3O43151 1660 aa19.08■□□□□ 0.65
MSH5-201ENST00000375703 DEPDC5O75140 1603 aa19.08■□□□□ 0.65
MSH5-201ENST00000375703 FANCAO15360 1455 aa19.07■□□□□ 0.64
MSH5-201ENST00000375703 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.07■□□□□ 0.64
MSH5-201ENST00000375703 SLFN5Q08AF3 891 aa19.07■□□□□ 0.64
MSH5-201ENST00000375703 ATP7AQ04656 1500 aa19.07■□□□□ 0.64
MSH5-201ENST00000375703 SKAP1Q86WV1 359 aa19.06■□□□□ 0.64
MSH5-201ENST00000375703 CCDC146Q8IYE0 955 aa19.06■□□□□ 0.64
MSH5-201ENST00000375703 RTL5Q5HYW3 569 aaPredicted RBP19.05■□□□□ 0.64
MSH5-201ENST00000375703 ADGRF5Q8IZF2 1346 aa19.05■□□□□ 0.64
MSH5-201ENST00000375703 VWDEQ8N2E2 1590 aa19.04■□□□□ 0.64
MSH5-201ENST00000375703 APAF1O14727 1248 aa19.03■□□□□ 0.64
MSH5-201ENST00000375703 KDM2BQ8NHM5 1336 aa19.03■□□□□ 0.64
MSH5-201ENST00000375703 CENPQQ7L2Z9 268 aaPredicted RBP19.02■□□□□ 0.64
MSH5-201ENST00000375703 TRMT2AQ8IZ69 625 aaKnown RBP19.02■□□□□ 0.64
MSH5-201ENST00000375703 KIAA1210Q9ULL0 1709 aa19.02■□□□□ 0.64
MSH5-201ENST00000375703 MYOM1P52179 1685 aa19.02■□□□□ 0.63
MSH5-201ENST00000375703 CARD14Q9BXL6 1004 aa19.02■□□□□ 0.63
MSH5-201ENST00000375703 INO80Q9ULG1 1556 aaPredicted RBP19.01■□□□□ 0.63
MSH5-201ENST00000375703 ADGRL1O94910 1474 aa19.01■□□□□ 0.63
MSH5-201ENST00000375703 NEURL4Q96JN8 1562 aa19.01■□□□□ 0.63
MSH5-201ENST00000375703 KDM5AP29375 1690 aaKnown RBP19■□□□□ 0.63
MSH5-201ENST00000375703 ERVK-7P63135 1459 aa19■□□□□ 0.63
MSH5-201ENST00000375703 ABCA9Q8IUA7 1624 aa18.99■□□□□ 0.63
MSH5-201ENST00000375703 MYOM2P54296 1465 aa18.99■□□□□ 0.63
MSH5-201ENST00000375703 SPINK5Q9NQ38 1064 aaPredicted RBP18.99■□□□□ 0.63
MSH5-201ENST00000375703 UGGT1Q9NYU2 1555 aa18.99■□□□□ 0.63
MSH5-201ENST00000375703 MAP3K4Q9Y6R4 1608 aa18.99■□□□□ 0.63
MSH5-201ENST00000375703 E9PSI1 815 aa18.96■□□□□ 0.63
MSH5-201ENST00000375703 CHGAP10645 457 aaKnown RBP18.96■□□□□ 0.63
MSH5-201ENST00000375703 DDRGK1Q96HY6 314 aa18.96■□□□□ 0.63
MSH5-201ENST00000375703 NGEFQ8N5V2 710 aa18.95■□□□□ 0.62
MSH5-201ENST00000375703 ABCA6Q8N139 1617 aa18.95■□□□□ 0.62
MSH5-201ENST00000375703 LAS1LQ9Y4W2 734 aaKnown RBP18.95■□□□□ 0.62
MSH5-201ENST00000375703 NKTRP30414 1462 aaKnown RBP18.95■□□□□ 0.62
MSH5-201ENST00000375703 MROH1Q8NDA8 1641 aa18.95■□□□□ 0.62
MSH5-201ENST00000375703 BCAR3O75815 825 aa18.94■□□□□ 0.62
MSH5-201ENST00000375703 CENPJQ9HC77 1338 aaPredicted RBP18.93■□□□□ 0.62
MSH5-201ENST00000375703 KIF1BO60333 1816 aa18.93■□□□□ 0.62
MSH5-201ENST00000375703 EFCAB6Q5THR3 1501 aa18.92■□□□□ 0.62
MSH5-201ENST00000375703 TRAK1Q9UPV9 953 aa18.92■□□□□ 0.62
MSH5-201ENST00000375703 SBNO2Q9Y2G9 1366 aa18.91■□□□□ 0.62
MSH5-201ENST00000375703 FAM161AQ3B820 660 aa18.91■□□□□ 0.62
MSH5-201ENST00000375703 DMRT2Q9Y5R5 561 aa18.91■□□□□ 0.62
MSH5-201ENST00000375703 NOS1P29475 1434 aa18.91■□□□□ 0.62
MSH5-201ENST00000375703 ASXL2Q76L83 1435 aa18.91■□□□□ 0.62
MSH5-201ENST00000375703 PPM1GO15355 546 aaPredicted RBP18.9■□□□□ 0.62
MSH5-201ENST00000375703 NEFMP07197 916 aa18.9■□□□□ 0.62
MSH5-201ENST00000375703 NRXN1Q9ULB1 1477 aa18.9■□□□□ 0.62
MSH5-201ENST00000375703 POLR3AO14802 1390 aaPredicted RBP18.9■□□□□ 0.62
MSH5-201ENST00000375703 MORC1Q86VD1 984 aa18.9■□□□□ 0.62
MSH5-201ENST00000375703 USP35Q9P2H5 1018 aa18.89■□□□□ 0.61
MSH5-201ENST00000375703 WWC1Q8IX03 1113 aa18.88■□□□□ 0.61
MSH5-201ENST00000375703 SLC12A5Q9H2X9 1139 aa18.88■□□□□ 0.61
MSH5-201ENST00000375703 C14orf93Q9H972 538 aaKnown RBP18.88■□□□□ 0.61
MSH5-201ENST00000375703 RGS3P49796 1198 aa18.87■□□□□ 0.61
MSH5-201ENST00000375703 TNNT2P45379 298 aaPredicted RBP18.87■□□□□ 0.61
MSH5-201ENST00000375703 C8orf34Q49A92 452 aa18.87■□□□□ 0.61
MSH5-201ENST00000375703 GGT6Q6P531 493 aa18.87■□□□□ 0.61
MSH5-201ENST00000375703 PPRC1Q5VV67 1664 aaKnown RBP18.87■□□□□ 0.61
MSH5-201ENST00000375703 LMTK2Q8IWU2 1503 aa18.87■□□□□ 0.61
MSH5-201ENST00000375703 IFT172Q9UG01 1749 aa18.87■□□□□ 0.61
MSH5-201ENST00000375703 KIDINS220Q9ULH0 1771 aa18.86■□□□□ 0.61
MSH5-201ENST00000375703 ZNF518AQ6AHZ1 1483 aa18.86■□□□□ 0.61
MSH5-201ENST00000375703 MROH2AA6NES4 1674 aa18.86■□□□□ 0.61
MSH5-201ENST00000375703 NSD3Q9BZ95 1437 aa18.86■□□□□ 0.61
MSH5-201ENST00000375703 TMEM132EQ6IEE7 984 aa18.85■□□□□ 0.61
MSH5-201ENST00000375703 MYO3AQ8NEV4 1616 aa18.85■□□□□ 0.61
MSH5-201ENST00000375703 PDE3AQ14432 1141 aa18.85■□□□□ 0.61
MSH5-201ENST00000375703 NEUROD2Q15784 382 aa18.84■□□□□ 0.61
MSH5-201ENST00000375703 DAXXQ9UER7 740 aaPredicted RBP18.84■□□□□ 0.61
MSH5-201ENST00000375703 NPM1P06748 294 aaKnown RBP eCLIP18.84■□□□□ 0.61
MSH5-201ENST00000375703 SETBP1Q9Y6X0 1596 aa18.84■□□□□ 0.61
MSH5-201ENST00000375703 RUNDC1Q96C34 613 aa18.83■□□□□ 0.61
MSH5-201ENST00000375703 ADGRB3O60242 1522 aa18.83■□□□□ 0.61
MSH5-201ENST00000375703 CGNL1Q0VF96 1302 aa18.83■□□□□ 0.6
MSH5-201ENST00000375703 CANXP27824 592 aaKnown RBP18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms