RNA–Protein interactions for RNA: ENST00000375604.6

MCF2L-203, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS P3 TSL 2 BASIC

Gene MCF2L, Length 6,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-203ENST00000375604 DIAPH1O60610 1272 aaKnown RBP21.2■□□□□ 0.98
MCF2L-203ENST00000375604 FAM177BA6PVY3 158 aa21.19■□□□□ 0.98
MCF2L-203ENST00000375604 ZKSCAN2Q63HK3 967 aa21.19■□□□□ 0.98
MCF2L-203ENST00000375604 GGNBP2Q9H3C7 697 aa21.19■□□□□ 0.98
MCF2L-203ENST00000375604 FYB1O15117 783 aa21.19■□□□□ 0.98
MCF2L-203ENST00000375604 FAM184AQ8NB25 1140 aa21.19■□□□□ 0.98
MCF2L-203ENST00000375604 PHF23Q9BUL5 403 aaPredicted RBP21.18■□□□□ 0.98
MCF2L-203ENST00000375604 RRP1P56182 461 aaKnown RBP21.17■□□□□ 0.98
MCF2L-203ENST00000375604 SMARCA4P51532 1647 aa21.17■□□□□ 0.98
MCF2L-203ENST00000375604 ANO2Q9NQ90 1003 aa21.17■□□□□ 0.98
MCF2L-203ENST00000375604 VPS37DQ86XT2 251 aa21.16■□□□□ 0.98
MCF2L-203ENST00000375604 FKBP5Q13451 457 aaPredicted RBP21.15■□□□□ 0.98
MCF2L-203ENST00000375604 PRKRIP1Q9H875 184 aaPredicted RBP21.15■□□□□ 0.98
MCF2L-203ENST00000375604 DIAPH3Q9NSV4 1193 aa21.15■□□□□ 0.98
MCF2L-203ENST00000375604 TRIM34Q9BYJ4 488 aa21.15■□□□□ 0.98
MCF2L-203ENST00000375604 MTMR7Q9Y216 660 aa21.15■□□□□ 0.98
MCF2L-203ENST00000375604 A0A0U1RQG5 324 aaPredicted RBP21.14■□□□□ 0.98
MCF2L-203ENST00000375604 HDAC5Q9UQL6 1122 aa21.14■□□□□ 0.98
MCF2L-203ENST00000375604 UACAQ9BZF9 1416 aa21.14■□□□□ 0.98
MCF2L-203ENST00000375604 TPD52L1Q16890 204 aaPredicted RBP21.14■□□□□ 0.98
MCF2L-203ENST00000375604 E9PSI1 815 aa21.14■□□□□ 0.97
MCF2L-203ENST00000375604 CHMP4AQ9BY43 222 aa21.14■□□□□ 0.97
MCF2L-203ENST00000375604 NEXNQ0ZGT2 675 aa21.14■□□□□ 0.97
MCF2L-203ENST00000375604 AQRO60306 1485 aaKnown RBP eCLIP21.13■□□□□ 0.972e-6■■□□□ 12.9
MCF2L-203ENST00000375604 DHX16O60231 1041 aaKnown RBP21.13■□□□□ 0.97
MCF2L-203ENST00000375604 TSPYL4Q9UJ04 414 aa21.13■□□□□ 0.97
MCF2L-203ENST00000375604 PTMSP20962 102 aa21.12■□□□□ 0.97
MCF2L-203ENST00000375604 IFIT2P09913 472 aaKnown RBP21.12■□□□□ 0.97
MCF2L-203ENST00000375604 AKAP17AQ02040 695 aaKnown RBP21.12■□□□□ 0.97
MCF2L-203ENST00000375604 PDE4AP27815 886 aa21.11■□□□□ 0.97
MCF2L-203ENST00000375604 BCL11BQ9C0K0 894 aaPredicted RBP21.11■□□□□ 0.97
MCF2L-203ENST00000375604 PDE3BQ13370 1112 aa21.11■□□□□ 0.97
MCF2L-203ENST00000375604 PHLDB1Q86UU1 1377 aa21.1■□□□□ 0.97
MCF2L-203ENST00000375604 ATF3P18847 181 aa21.1■□□□□ 0.97
MCF2L-203ENST00000375604 NLRP2Q9NX02 1062 aa21.1■□□□□ 0.97
MCF2L-203ENST00000375604 CSPP1Q1MSJ5 1256 aa21.1■□□□□ 0.97
MCF2L-203ENST00000375604 FGD5Q6ZNL6 1462 aa21.1■□□□□ 0.97
MCF2L-203ENST00000375604 FBXO3Q9UK99 471 aa21.1■□□□□ 0.97
MCF2L-203ENST00000375604 CENPQQ7L2Z9 268 aaPredicted RBP21.09■□□□□ 0.97
MCF2L-203ENST00000375604 NOL10Q9BSC4 688 aaKnown RBP21.08■□□□□ 0.96
MCF2L-203ENST00000375604 GAPVD1Q14C86 1478 aa21.08■□□□□ 0.96
MCF2L-203ENST00000375604 NEUROD6Q96NK8 337 aa21.07■□□□□ 0.96
MCF2L-203ENST00000375604 PANK1Q8TE04 598 aa21.07■□□□□ 0.96
MCF2L-203ENST00000375604 CTDP1Q9Y5B0 961 aaPredicted RBP21.07■□□□□ 0.96
MCF2L-203ENST00000375604 FAM161AQ3B820 660 aa21.06■□□□□ 0.96
MCF2L-203ENST00000375604 RIC3Q7Z5B4 369 aa21.06■□□□□ 0.96
MCF2L-203ENST00000375604 CCAR2Q8N163 923 aaKnown RBP21.06■□□□□ 0.96
MCF2L-203ENST00000375604 SYNE3Q6ZMZ3 975 aa21.05■□□□□ 0.96
MCF2L-203ENST00000375604 NFXL1Q6ZNB6 911 aa21.05■□□□□ 0.96
MCF2L-203ENST00000375604 CCDC27Q2M243 656 aa21.05■□□□□ 0.96
MCF2L-203ENST00000375604 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.05■□□□□ 0.96
MCF2L-203ENST00000375604 TCEAL9Q9UHQ7 104 aa21.05■□□□□ 0.96
MCF2L-203ENST00000375604 DDX49Q9Y6V7 483 aaKnown RBP21.05■□□□□ 0.96
MCF2L-203ENST00000375604 ESCO1Q5FWF5 840 aa21.04■□□□□ 0.96
MCF2L-203ENST00000375604 STRN4Q9NRL3 753 aa21.04■□□□□ 0.96
MCF2L-203ENST00000375604 DZIP1LQ8IYY4 767 aaKnown RBP21.04■□□□□ 0.96
MCF2L-203ENST00000375604 LNPKQ9C0E8 428 aa21.04■□□□□ 0.96
MCF2L-203ENST00000375604 CCDC34Q96HJ3 373 aa21.03■□□□□ 0.96
MCF2L-203ENST00000375604 G3BP1Q13283 466 aaKnown RBP eCLIP21.03■□□□□ 0.96
MCF2L-203ENST00000375604 AFAP1Q8N556 730 aa21.02■□□□□ 0.96
MCF2L-203ENST00000375604 RAPGEF4Q8WZA2 1011 aa21.02■□□□□ 0.95
MCF2L-203ENST00000375604 AMOTL1Q8IY63 956 aa21.01■□□□□ 0.95
MCF2L-203ENST00000375604 PCMTD1Q96MG8 357 aaPredicted RBP21.01■□□□□ 0.95
MCF2L-203ENST00000375604 STK11IPQ8N1F8 1099 aa21.01■□□□□ 0.95
MCF2L-203ENST00000375604 NLRP6P59044 892 aa21.01■□□□□ 0.95
MCF2L-203ENST00000375604 NUTM2BA6NNL0 878 aaPredicted RBP21■□□□□ 0.95
MCF2L-203ENST00000375604 NUTM2EB1AL46 878 aaPredicted RBP21■□□□□ 0.95
MCF2L-203ENST00000375604 NUTM2AQ8IVF1 878 aaPredicted RBP21■□□□□ 0.95
MCF2L-203ENST00000375604 RUNDC1Q96C34 613 aa21■□□□□ 0.95
MCF2L-203ENST00000375604 ZNF592Q92610 1267 aa21■□□□□ 0.95
MCF2L-203ENST00000375604 ARHGAP5Q13017 1502 aa21■□□□□ 0.95
MCF2L-203ENST00000375604 C1orf115Q9H7X2 142 aa21■□□□□ 0.95
MCF2L-203ENST00000375604 PPP1R1BQ9UD71 204 aaPredicted RBP21■□□□□ 0.95
MCF2L-203ENST00000375604 ABTB2Q8N961 1025 aa20.99■□□□□ 0.95
MCF2L-203ENST00000375604 CEP89Q96ST8 783 aa20.99■□□□□ 0.95
MCF2L-203ENST00000375604 RBM42Q9BTD8 480 aaKnown RBP20.99■□□□□ 0.95
MCF2L-203ENST00000375604 RBM33Q96EV2 1170 aaKnown RBP20.98■□□□□ 0.95
MCF2L-203ENST00000375604 DDX58O95786 925 aaKnown RBP20.98■□□□□ 0.95
MCF2L-203ENST00000375604 TPM3P06753 285 aa20.98■□□□□ 0.95
MCF2L-203ENST00000375604 TRIM29Q14134 588 aa20.98■□□□□ 0.95
MCF2L-203ENST00000375604 KIF7Q2M1P5 1343 aa20.98■□□□□ 0.95
MCF2L-203ENST00000375604 WASHC4Q2M389 1173 aa20.98■□□□□ 0.95
MCF2L-203ENST00000375604 TXNDC2Q86VQ3 553 aa20.98■□□□□ 0.95
MCF2L-203ENST00000375604 PHF14O94880 888 aa20.97■□□□□ 0.95
MCF2L-203ENST00000375604 DDX19BQ9UMR2 479 aa20.97■□□□□ 0.95
MCF2L-203ENST00000375604 VPS37CA5D8V6 355 aaPredicted RBP20.96■□□□□ 0.95
MCF2L-203ENST00000375604 GOLGA6L19H0YKK7 550 aa20.96■□□□□ 0.95
MCF2L-203ENST00000375604 CPLX1O14810 134 aa20.96■□□□□ 0.95
MCF2L-203ENST00000375604 CFAP70Q5T0N1 1121 aa20.96■□□□□ 0.95
MCF2L-203ENST00000375604 KIF3AQ9Y496 699 aa20.96■□□□□ 0.95
MCF2L-203ENST00000375604 ZBED9Q6R2W3 1325 aa20.95■□□□□ 0.94
MCF2L-203ENST00000375604 BECN2A8MW95 431 aa20.95■□□□□ 0.94
MCF2L-203ENST00000375604 IGF1RP08069 1367 aa20.94■□□□□ 0.94
MCF2L-203ENST00000375604 CWC22Q9HCG8 908 aaKnown RBP20.94■□□□□ 0.94
MCF2L-203ENST00000375604 DDX11L8A8MPP1 907 aa20.94■□□□□ 0.94
MCF2L-203ENST00000375604 ADAMTS8Q9UP79 889 aa20.93■□□□□ 0.94
MCF2L-203ENST00000375604 MTHFSP49914 203 aa20.93■□□□□ 0.94
MCF2L-203ENST00000375604 XPCQ01831 940 aaPredicted RBP20.93■□□□□ 0.94
MCF2L-203ENST00000375604 CDCA7LQ96GN5 454 aa20.93■□□□□ 0.94
MCF2L-203ENST00000375604 DNAJC2Q99543 621 aaKnown RBP20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms