RNA–Protein interactions for RNA: ENST00000374990.6

TGFBR1-201, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-201ENST00000374990 RIPK4P57078 832 aa24.26■■□□□ 1.47
TGFBR1-201ENST00000374990 PNISRQ8TF01 805 aaKnown RBP24.26■■□□□ 1.47
TGFBR1-201ENST00000374990 ARHGAP5Q13017 1502 aa24.26■■□□□ 1.47
TGFBR1-201ENST00000374990 DAPK1P53355 1430 aa24.26■■□□□ 1.47
TGFBR1-201ENST00000374990 NUTM2FA1L443 756 aa24.24■■□□□ 1.47
TGFBR1-201ENST00000374990 NPHP1O15259 732 aa24.24■■□□□ 1.47
TGFBR1-201ENST00000374990 KIAA0586Q9BVV6 1533 aa24.23■■□□□ 1.47
TGFBR1-201ENST00000374990 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.23■■□□□ 1.47
TGFBR1-201ENST00000374990 KIAA2012Q0VF49 1180 aa24.23■■□□□ 1.47
TGFBR1-201ENST00000374990 NBPF1Q3BBV0 1214 aa24.23■■□□□ 1.47
TGFBR1-201ENST00000374990 SUPT6HQ7KZ85 1726 aaKnown RBP24.23■■□□□ 1.47
TGFBR1-201ENST00000374990 WDR97A6NE52 1622 aa24.22■■□□□ 1.47
TGFBR1-201ENST00000374990 CFAP70Q5T0N1 1121 aa24.22■■□□□ 1.47
TGFBR1-201ENST00000374990 PPP2R1AP30153 589 aa24.22■■□□□ 1.47
TGFBR1-201ENST00000374990 CC2D2AQ9P2K1 1620 aa24.21■■□□□ 1.47
TGFBR1-201ENST00000374990 EPRSP07814 1512 aaKnown RBP24.21■■□□□ 1.47
TGFBR1-201ENST00000374990 BICRAQ9NZM4 1560 aa24.21■■□□□ 1.47
TGFBR1-201ENST00000374990 GSE1Q14687 1217 aa24.21■■□□□ 1.47
TGFBR1-201ENST00000374990 CSPP1Q1MSJ5 1256 aa24.21■■□□□ 1.47
TGFBR1-201ENST00000374990 PEG3Q9GZU2 1588 aa24.21■■□□□ 1.47
TGFBR1-201ENST00000374990 GNAI1P63096 354 aa24.2■■□□□ 1.47
TGFBR1-201ENST00000374990 SCAPERQ9BY12 1400 aa24.19■■□□□ 1.46
TGFBR1-201ENST00000374990 LTV1Q96GA3 475 aaPredicted RBP24.19■■□□□ 1.46
TGFBR1-201ENST00000374990 CYB5RLQ6IPT4 315 aa24.18■■□□□ 1.46
TGFBR1-201ENST00000374990 SLC4A3P48751 1232 aa24.18■■□□□ 1.46
TGFBR1-201ENST00000374990 TAOK2Q9UL54 1235 aa24.18■■□□□ 1.46
TGFBR1-201ENST00000374990 SKOR2Q2VWA4 1001 aaPredicted RBP24.17■■□□□ 1.46
TGFBR1-201ENST00000374990 DRC7Q8IY82 874 aa24.17■■□□□ 1.46
TGFBR1-201ENST00000374990 MTHFSP49914 203 aa24.17■■□□□ 1.46
TGFBR1-201ENST00000374990 REC8O95072 547 aa24.16■■□□□ 1.46
TGFBR1-201ENST00000374990 CDCA7LQ96GN5 454 aa24.16■■□□□ 1.46
TGFBR1-201ENST00000374990 TCP11L2Q8N4U5 519 aa24.16■■□□□ 1.46
TGFBR1-201ENST00000374990 PDE3AQ14432 1141 aa24.14■■□□□ 1.46
TGFBR1-201ENST00000374990 GORABQ5T7V8 394 aa24.14■■□□□ 1.46
TGFBR1-201ENST00000374990 GNL2Q13823 731 aaKnown RBP24.13■■□□□ 1.45
TGFBR1-201ENST00000374990 TEFQ10587 303 aa24.13■■□□□ 1.45
TGFBR1-201ENST00000374990 GGNBP2Q9H3C7 697 aa24.13■■□□□ 1.45
TGFBR1-201ENST00000374990 PHF14O94880 888 aa24.12■■□□□ 1.45
TGFBR1-201ENST00000374990 TMEM132EQ6IEE7 984 aa24.12■■□□□ 1.45
TGFBR1-201ENST00000374990 KIF3AQ9Y496 699 aa24.12■■□□□ 1.45
TGFBR1-201ENST00000374990 CHMP5Q9NZZ3 219 aa24.12■■□□□ 1.45
TGFBR1-201ENST00000374990 SMG6Q86US8 1419 aaKnown RBP24.12■■□□□ 1.45
TGFBR1-201ENST00000374990 SNAPC4Q5SXM2 1469 aa24.11■■□□□ 1.45
TGFBR1-201ENST00000374990 ANKRD30BQ9BXX2 1392 aa24.11■■□□□ 1.45
TGFBR1-201ENST00000374990 FOXD4L1Q9NU39 408 aa24.11■■□□□ 1.45
TGFBR1-201ENST00000374990 PCF11O94913 1555 aaKnown RBP24.1■■□□□ 1.45
TGFBR1-201ENST00000374990 ATP6V1DQ9Y5K8 247 aa24.09■■□□□ 1.45
TGFBR1-201ENST00000374990 DDX49Q9Y6V7 483 aaKnown RBP24.09■■□□□ 1.45
TGFBR1-201ENST00000374990 PANK1Q8TE04 598 aa24.09■■□□□ 1.45
TGFBR1-201ENST00000374990 ZNF330Q9Y3S2 320 aaPredicted RBP24.08■■□□□ 1.45
TGFBR1-201ENST00000374990 CABP2Q9NPB3 220 aa24.07■■□□□ 1.44
TGFBR1-201ENST00000374990 CHMP3Q9Y3E7 222 aa24.07■■□□□ 1.44
TGFBR1-201ENST00000374990 CUL7Q14999 1698 aa24.07■■□□□ 1.44
TGFBR1-201ENST00000374990 TAF7LQ5H9L4 462 aa24.07■■□□□ 1.44
TGFBR1-201ENST00000374990 C1orf141Q5JVX7 400 aa24.06■■□□□ 1.44
TGFBR1-201ENST00000374990 RILPL2Q969X0 211 aa24.06■■□□□ 1.44
TGFBR1-201ENST00000374990 CHMP4CQ96CF2 233 aa24.06■■□□□ 1.44
TGFBR1-201ENST00000374990 IQGAP2Q13576 1575 aa24.06■■□□□ 1.44
TGFBR1-201ENST00000374990 CCDC34Q96HJ3 373 aa24.05■■□□□ 1.44
TGFBR1-201ENST00000374990 CDK13Q14004 1512 aaKnown RBP24.05■■□□□ 1.44
TGFBR1-201ENST00000374990 CCDC184Q52MB2 194 aa24.04■■□□□ 1.44
TGFBR1-201ENST00000374990 ERBINQ96RT1 1412 aa24.04■■□□□ 1.44
TGFBR1-201ENST00000374990 SLC52A1Q9NWF4 448 aa24.04■■□□□ 1.44
TGFBR1-201ENST00000374990 LAMC3Q9Y6N6 1575 aa24.04■■□□□ 1.44
TGFBR1-201ENST00000374990 RUFY2Q8WXA3 655 aa24.03■■□□□ 1.44
TGFBR1-201ENST00000374990 FAM69CQ0P6D2 419 aa24.03■■□□□ 1.44
TGFBR1-201ENST00000374990 NOL8Q76FK4 1167 aaKnown RBP24.03■■□□□ 1.44
TGFBR1-201ENST00000374990 LNPKQ9C0E8 428 aa24.02■■□□□ 1.44
TGFBR1-201ENST00000374990 CT47B1P0C2W7 299 aaPredicted RBP24.02■■□□□ 1.44
TGFBR1-201ENST00000374990 C22orf23Q9BZE7 217 aa24.02■■□□□ 1.44
TGFBR1-201ENST00000374990 AKNAQ7Z591 1439 aa24.02■■□□□ 1.44
TGFBR1-201ENST00000374990 NEXNQ0ZGT2 675 aa24.01■■□□□ 1.43
TGFBR1-201ENST00000374990 NINLQ9Y2I6 1382 aa24■■□□□ 1.43
TGFBR1-201ENST00000374990 SLC12A5Q9H2X9 1139 aa24■■□□□ 1.43
TGFBR1-201ENST00000374990 HSP90B1P14625 803 aaKnown RBP24■■□□□ 1.43
TGFBR1-201ENST00000374990 RPGRIP1LQ68CZ1 1315 aa24■■□□□ 1.43
TGFBR1-201ENST00000374990 FKBP5Q13451 457 aaPredicted RBP24■■□□□ 1.43
TGFBR1-201ENST00000374990 HMOX1P09601 288 aa23.99■■□□□ 1.43
TGFBR1-201ENST00000374990 ABCC5O15440 1437 aa23.99■■□□□ 1.43
TGFBR1-201ENST00000374990 INTS3Q68E01 1043 aaKnown RBP23.99■■□□□ 1.43
TGFBR1-201ENST00000374990 DIAPH3Q9NSV4 1193 aa23.99■■□□□ 1.43
TGFBR1-201ENST00000374990 WDR63Q8IWG1 891 aa23.98■■□□□ 1.43
TGFBR1-201ENST00000374990 TPM4P67936 248 aa23.98■■□□□ 1.43
TGFBR1-201ENST00000374990 C9orf78Q9NZ63 289 aaPredicted RBP23.98■■□□□ 1.43
TGFBR1-201ENST00000374990 HSP90AB4PQ58FF6 505 aa23.97■■□□□ 1.43
TGFBR1-201ENST00000374990 CCDC141Q6ZP82 1450 aa23.97■■□□□ 1.43
TGFBR1-201ENST00000374990 ZKSCAN1P17029 563 aaPredicted RBP23.96■■□□□ 1.43
TGFBR1-201ENST00000374990 NUCB2P80303 420 aa23.96■■□□□ 1.43
TGFBR1-201ENST00000374990 TSPYL4Q9UJ04 414 aa23.96■■□□□ 1.43
TGFBR1-201ENST00000374990 PTPN23Q9H3S7 1636 aa23.96■■□□□ 1.43
TGFBR1-201ENST00000374990 BIVM-ERCC5R4GMW8 1640 aa23.95■■□□□ 1.43
TGFBR1-201ENST00000374990 MAGI1Q96QZ7 1491 aaPredicted RBP23.95■■□□□ 1.42
TGFBR1-201ENST00000374990 DDX58O95786 925 aaKnown RBP23.95■■□□□ 1.42
TGFBR1-201ENST00000374990 BACH2Q9BYV9 841 aa23.95■■□□□ 1.42
TGFBR1-201ENST00000374990 NCOA1Q15788 1441 aa23.94■■□□□ 1.42
TGFBR1-201ENST00000374990 NFKBIBQ15653 356 aa23.94■■□□□ 1.42
TGFBR1-201ENST00000374990 EXOSC9Q06265 439 aaKnown RBP23.94■■□□□ 1.42
TGFBR1-201ENST00000374990 LRRFIP1Q32MZ4 808 aaKnown RBP23.93■■□□□ 1.42
TGFBR1-201ENST00000374990 EIF2S2P20042 333 aaKnown RBP23.93■■□□□ 1.42
TGFBR1-201ENST00000374990 PRKAR2BP31323 418 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms