RNA–Protein interactions for RNA: ENST00000372390.8

TSC22D3-205, Transcript of TSC22 domain family member 3, humanhuman

TSL 1 (best) BASIC

Gene TSC22D3, Length 1,812 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D3-205ENST00000372390 IFT172Q9UG01 1749 aa29.71■■■□□ 2.35
TSC22D3-205ENST00000372390 NBPF8Q3BBV2 869 aa29.69■■■□□ 2.34
TSC22D3-205ENST00000372390 TMEM2Q9UHN6 1383 aa29.69■■■□□ 2.34
TSC22D3-205ENST00000372390 SLIT1O75093 1534 aa29.68■■■□□ 2.34
TSC22D3-205ENST00000372390 PPLO60437 1756 aa29.67■■■□□ 2.34
TSC22D3-205ENST00000372390 ARHGAP23Q9P227 1491 aa29.66■■■□□ 2.34
TSC22D3-205ENST00000372390 RPGRIP1LQ68CZ1 1315 aa29.66■■■□□ 2.34
TSC22D3-205ENST00000372390 RIMS2Q9UQ26 1411 aa29.65■■■□□ 2.34
TSC22D3-205ENST00000372390 NEXMIFQ5QGS0 1516 aa29.65■■■□□ 2.34
TSC22D3-205ENST00000372390 ZFYVE9O95405 1425 aa29.64■■■□□ 2.33
TSC22D3-205ENST00000372390 HDGFP51858 240 aaKnown RBP29.63■■■□□ 2.33
TSC22D3-205ENST00000372390 NUTM2DQ5VT03 806 aaPredicted RBP29.61■■■□□ 2.33
TSC22D3-205ENST00000372390 HSPA2P54652 639 aa29.61■■■□□ 2.33
TSC22D3-205ENST00000372390 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.61■■■□□ 2.33
TSC22D3-205ENST00000372390 EID1Q9Y6B2 187 aa29.61■■■□□ 2.33
TSC22D3-205ENST00000372390 PRAG1Q86YV5 1406 aa29.6■■■□□ 2.33
TSC22D3-205ENST00000372390 SCAF11Q99590 1463 aaKnown RBP29.59■■■□□ 2.33
TSC22D3-205ENST00000372390 ADGRF5Q8IZF2 1346 aa29.59■■■□□ 2.33
TSC22D3-205ENST00000372390 MYOM2P54296 1465 aa29.58■■■□□ 2.33
TSC22D3-205ENST00000372390 ANKLE2Q86XL3 938 aa29.57■■■□□ 2.32
TSC22D3-205ENST00000372390 POLR1AO95602 1720 aaPredicted RBP29.57■■■□□ 2.32
TSC22D3-205ENST00000372390 TXNDC2Q86VQ3 553 aa29.55■■■□□ 2.32
TSC22D3-205ENST00000372390 VGFO15240 615 aaPredicted RBP29.55■■■□□ 2.32
TSC22D3-205ENST00000372390 STAC3Q96MF2 364 aa29.55■■■□□ 2.32
TSC22D3-205ENST00000372390 TRPM1Q7Z4N2 1603 aa29.53■■■□□ 2.32
TSC22D3-205ENST00000372390 NRXN1Q9ULB1 1477 aa29.52■■■□□ 2.32
TSC22D3-205ENST00000372390 LTKP29376 864 aa29.52■■■□□ 2.32
TSC22D3-205ENST00000372390 SENP3Q9H4L4 574 aaPredicted RBP29.51■■■□□ 2.31
TSC22D3-205ENST00000372390 PLEKHG1Q9ULL1 1385 aa29.49■■■□□ 2.31
TSC22D3-205ENST00000372390 RALGAPBQ86X10 1494 aa29.49■■■□□ 2.31
TSC22D3-205ENST00000372390 PIK3C2GO75747 1445 aa29.47■■■□□ 2.31
TSC22D3-205ENST00000372390 MED14O60244 1454 aa29.46■■■□□ 2.31
TSC22D3-205ENST00000372390 NCKAP5LQ9HCH0 1330 aa29.46■■■□□ 2.31
TSC22D3-205ENST00000372390 NBPF1Q3BBV0 1214 aa29.45■■■□□ 2.31
TSC22D3-205ENST00000372390 NPHP4O75161 1426 aaPredicted RBP29.45■■■□□ 2.3
TSC22D3-205ENST00000372390 STRCQ7RTU9 1775 aa29.44■■■□□ 2.3
TSC22D3-205ENST00000372390 IQGAP1P46940 1657 aa29.44■■■□□ 2.3
TSC22D3-205ENST00000372390 SETBP1Q9Y6X0 1596 aa29.44■■■□□ 2.3
TSC22D3-205ENST00000372390 BCANQ96GW7 911 aa29.43■■■□□ 2.3
TSC22D3-205ENST00000372390 CFAP70Q5T0N1 1121 aa29.42■■■□□ 2.3
TSC22D3-205ENST00000372390 KIAA1210Q9ULL0 1709 aa29.41■■■□□ 2.3
TSC22D3-205ENST00000372390 ROCK2O75116 1388 aaKnown RBP29.4■■■□□ 2.3
TSC22D3-205ENST00000372390 NRXN3Q9Y4C0 1643 aa29.39■■■□□ 2.29
TSC22D3-205ENST00000372390 LAMC1P11047 1609 aa29.38■■■□□ 2.29
TSC22D3-205ENST00000372390 DIP2AQ14689 1571 aa29.38■■■□□ 2.29
TSC22D3-205ENST00000372390 CARD11Q9BXL7 1154 aa29.35■■■□□ 2.29
TSC22D3-205ENST00000372390 C14orf93Q9H972 538 aaKnown RBP29.35■■■□□ 2.29
TSC22D3-205ENST00000372390 GPRASP1Q5JY77 1395 aa29.35■■■□□ 2.29
TSC22D3-205ENST00000372390 DMRT2Q9Y5R5 561 aa29.34■■■□□ 2.29
TSC22D3-205ENST00000372390 ADAMTS13Q76LX8 1427 aa29.34■■■□□ 2.29
TSC22D3-205ENST00000372390 ALKQ9UM73 1620 aa29.33■■■□□ 2.29
TSC22D3-205ENST00000372390 HIRIP3Q9BW71 556 aaPredicted RBP29.32■■■□□ 2.28
TSC22D3-205ENST00000372390 SETD1AO15047 1707 aaKnown RBP29.31■■■□□ 2.28
TSC22D3-205ENST00000372390 ASXL1Q8IXJ9 1541 aa29.3■■■□□ 2.28
TSC22D3-205ENST00000372390 SLC26A8Q96RN1 970 aa29.3■■■□□ 2.28
TSC22D3-205ENST00000372390 ADGRB1O14514 1584 aa29.3■■■□□ 2.28
TSC22D3-205ENST00000372390 TMEM132EQ6IEE7 984 aa29.29■■■□□ 2.28
TSC22D3-205ENST00000372390 TBX22Q9Y458 520 aa29.28■■■□□ 2.28
TSC22D3-205ENST00000372390 HSPA5P11021 654 aaKnown RBP29.27■■■□□ 2.28
TSC22D3-205ENST00000372390 USP47Q96K76 1375 aa29.27■■■□□ 2.28
TSC22D3-205ENST00000372390 EIF4G2P78344 907 aaKnown RBP eCLIP29.25■■■□□ 2.27
TSC22D3-205ENST00000372390 PIK3R4Q99570 1358 aa29.24■■■□□ 2.27
TSC22D3-205ENST00000372390 METP08581 1390 aa29.22■■■□□ 2.27
TSC22D3-205ENST00000372390 ZNF316A6NFI3 1004 aaPredicted RBP29.18■■■□□ 2.26
TSC22D3-205ENST00000372390 TRAK1Q9UPV9 953 aa29.15■■■□□ 2.26
TSC22D3-205ENST00000372390 YTHDC2Q9H6S0 1430 aaKnown RBP29.15■■■□□ 2.26
TSC22D3-205ENST00000372390 ST20-MTHFSA0A0A6YYL1 179 aa29.15■■■□□ 2.26
TSC22D3-205ENST00000372390 STK26Q9P289 416 aa29.15■■■□□ 2.26
TSC22D3-205ENST00000372390 NWD1Q149M9 1564 aa29.14■■■□□ 2.26
TSC22D3-205ENST00000372390 CHD2O14647 1828 aaKnown RBP29.14■■■□□ 2.26
TSC22D3-205ENST00000372390 LRPPRCP42704 1394 aaKnown RBP29.13■■■□□ 2.25
TSC22D3-205ENST00000372390 XRN1Q8IZH2 1706 aaKnown RBP29.12■■■□□ 2.25
TSC22D3-205ENST00000372390 ARHGEF28Q8N1W1 1705 aaKnown RBP29.12■■■□□ 2.25
TSC22D3-205ENST00000372390 PTPRUQ92729 1446 aa29.12■■■□□ 2.25
TSC22D3-205ENST00000372390 KNDC1Q76NI1 1749 aa29.1■■■□□ 2.25
TSC22D3-205ENST00000372390 KCNA6P17658 529 aa29.1■■■□□ 2.25
TSC22D3-205ENST00000372390 AMOTL2Q9Y2J4 779 aa29.09■■■□□ 2.25
TSC22D3-205ENST00000372390 TECPR2O15040 1411 aa29.09■■■□□ 2.25
TSC22D3-205ENST00000372390 NKTRP30414 1462 aaKnown RBP29.08■■■□□ 2.25
TSC22D3-205ENST00000372390 ABCC11Q96J66 1382 aa29.08■■■□□ 2.25
TSC22D3-205ENST00000372390 CPS1P31327 1500 aa29.07■■■□□ 2.24
TSC22D3-205ENST00000372390 ZNF335Q9H4Z2 1342 aaPredicted RBP29.07■■■□□ 2.24
TSC22D3-205ENST00000372390 PTCH1Q13635 1447 aa29.07■■■□□ 2.24
TSC22D3-205ENST00000372390 DLC1Q96QB1 1528 aa29.05■■■□□ 2.24
TSC22D3-205ENST00000372390 EIF3AQ14152 1382 aaKnown RBP29.05■■■□□ 2.24
TSC22D3-205ENST00000372390 C11orf95C9JLR9 678 aaPredicted RBP29.04■■■□□ 2.24
TSC22D3-205ENST00000372390 TESK2Q96S53 571 aa29.04■■■□□ 2.24
TSC22D3-205ENST00000372390 STRCP1A6NGW2 1772 aa29.03■■■□□ 2.24
TSC22D3-205ENST00000372390 QRICH2Q9H0J4 1663 aa29.02■■■□□ 2.24
TSC22D3-205ENST00000372390 CENPJQ9HC77 1338 aaPredicted RBP29■■■□□ 2.23
TSC22D3-205ENST00000372390 FAM135BQ49AJ0 1406 aa29■■■□□ 2.23
TSC22D3-205ENST00000372390 ROBO2Q9HCK4 1378 aa29■■■□□ 2.23
TSC22D3-205ENST00000372390 SAFB2Q14151 953 aaKnown RBP eCLIP28.99■■■□□ 2.23
TSC22D3-205ENST00000372390 PRAM1Q96QH2 718 aa28.99■■■□□ 2.23
TSC22D3-205ENST00000372390 PLEKHH1Q9ULM0 1364 aa28.98■■■□□ 2.23
TSC22D3-205ENST00000372390 SIRT1Q96EB6 747 aa28.97■■■□□ 2.23
TSC22D3-205ENST00000372390 WAPLQ7Z5K2 1190 aa28.97■■■□□ 2.23
TSC22D3-205ENST00000372390 WASHC2AQ641Q2 1341 aa28.95■■■□□ 2.23
TSC22D3-205ENST00000372390 DISP3Q9P2K9 1392 aa28.95■■■□□ 2.23
TSC22D3-205ENST00000372390 POGKQ9P215 609 aa28.94■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms