RNA–Protein interactions for RNA: ENST00000372077.8

VEGFA-206, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,834 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-206ENST00000372077 PPLO60437 1756 aa26.09■■□□□ 1.77
VEGFA-206ENST00000372077 MYO5BQ9ULV0 1848 aa26.08■■□□□ 1.77
VEGFA-206ENST00000372077 TRPM1Q7Z4N2 1603 aa26.07■■□□□ 1.76
VEGFA-206ENST00000372077 NEXMIFQ5QGS0 1516 aa26.07■■□□□ 1.76
VEGFA-206ENST00000372077 NRXN1Q9ULB1 1477 aa26.06■■□□□ 1.76
VEGFA-206ENST00000372077 A2ML1A8K2U0 1454 aa26.06■■□□□ 1.76
VEGFA-206ENST00000372077 NLRP1Q9C000 1473 aa26.06■■□□□ 1.76
VEGFA-206ENST00000372077 KDM5AP29375 1690 aaKnown RBP26.05■■□□□ 1.76
VEGFA-206ENST00000372077 STAG3Q9UJ98 1225 aa26.03■■□□□ 1.76
VEGFA-206ENST00000372077 ADGRF5Q8IZF2 1346 aa26.03■■□□□ 1.76
VEGFA-206ENST00000372077 ZFYVE9O95405 1425 aa26.02■■□□□ 1.76
VEGFA-206ENST00000372077 GPRASP1Q5JY77 1395 aa26■■□□□ 1.75
VEGFA-206ENST00000372077 UBR1Q8IWV7 1749 aa25.99■■□□□ 1.75
VEGFA-206ENST00000372077 VGFO15240 615 aaPredicted RBP25.99■■□□□ 1.75
VEGFA-206ENST00000372077 KIAA1210Q9ULL0 1709 aa25.99■■□□□ 1.75
VEGFA-206ENST00000372077 PLPPR3Q6T4P5 718 aa25.98■■□□□ 1.75
VEGFA-206ENST00000372077 ROCK2O75116 1388 aaKnown RBP25.97■■□□□ 1.75
VEGFA-206ENST00000372077 EIF4G2P78344 907 aaKnown RBP eCLIP25.96■■□□□ 1.75
VEGFA-206ENST00000372077 NBPF1Q3BBV0 1214 aa25.96■■□□□ 1.75
VEGFA-206ENST00000372077 PTPRMP28827 1452 aa25.96■■□□□ 1.75
VEGFA-206ENST00000372077 PIK3C2GO75747 1445 aa25.96■■□□□ 1.75
VEGFA-206ENST00000372077 LAMC1P11047 1609 aa25.96■■□□□ 1.75
VEGFA-206ENST00000372077 MYO3AQ8NEV4 1616 aa25.95■■□□□ 1.75
VEGFA-206ENST00000372077 CARD11Q9BXL7 1154 aa25.95■■□□□ 1.74
VEGFA-206ENST00000372077 HSPA5P11021 654 aaKnown RBP25.94■■□□□ 1.74
VEGFA-206ENST00000372077 RIMS2Q9UQ26 1411 aa25.94■■□□□ 1.74
VEGFA-206ENST00000372077 NUTM2DQ5VT03 806 aaPredicted RBP25.91■■□□□ 1.74
VEGFA-206ENST00000372077 CFAP70Q5T0N1 1121 aa25.9■■□□□ 1.74
VEGFA-206ENST00000372077 C14orf93Q9H972 538 aaKnown RBP25.9■■□□□ 1.74
VEGFA-206ENST00000372077 USP47Q96K76 1375 aa25.9■■□□□ 1.74
VEGFA-206ENST00000372077 TMEM2Q9UHN6 1383 aa25.9■■□□□ 1.74
VEGFA-206ENST00000372077 SETD1BQ9UPS6 1966 aaKnown RBP25.89■■□□□ 1.74
VEGFA-206ENST00000372077 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.89■■□□□ 1.73
VEGFA-206ENST00000372077 HIRIP3Q9BW71 556 aaPredicted RBP25.89■■□□□ 1.73
VEGFA-206ENST00000372077 CEP170BQ9Y4F5 1589 aaPredicted RBP25.87■■□□□ 1.73
VEGFA-206ENST00000372077 HDGFP51858 240 aaKnown RBP25.87■■□□□ 1.73
VEGFA-206ENST00000372077 SETBP1Q9Y6X0 1596 aa25.86■■□□□ 1.73
VEGFA-206ENST00000372077 ZNF142P52746 1687 aaPredicted RBP25.85■■□□□ 1.73
VEGFA-206ENST00000372077 SLIT1O75093 1534 aa25.85■■□□□ 1.73
VEGFA-206ENST00000372077 ARHGAP23Q9P227 1491 aa25.85■■□□□ 1.73
VEGFA-206ENST00000372077 THEMISQ8N1K5 641 aaPredicted RBP25.84■■□□□ 1.73
VEGFA-206ENST00000372077 KDM4FA0A1W2PPD8 638 aa25.83■■□□□ 1.73
VEGFA-206ENST00000372077 IQGAP1P46940 1657 aa25.82■■□□□ 1.72
VEGFA-206ENST00000372077 ADGRB1O14514 1584 aa25.82■■□□□ 1.72
VEGFA-206ENST00000372077 SCAF11Q99590 1463 aaKnown RBP25.8■■□□□ 1.72
VEGFA-206ENST00000372077 ALKQ9UM73 1620 aa25.78■■□□□ 1.72
VEGFA-206ENST00000372077 LTKP29376 864 aa25.77■■□□□ 1.72
VEGFA-206ENST00000372077 ST20-MTHFSA0A0A6YYL1 179 aa25.77■■□□□ 1.72
VEGFA-206ENST00000372077 NRXN3Q9Y4C0 1643 aa25.76■■□□□ 1.71
VEGFA-206ENST00000372077 TXNDC2Q86VQ3 553 aa25.75■■□□□ 1.71
VEGFA-206ENST00000372077 EID1Q9Y6B2 187 aa25.75■■□□□ 1.71
VEGFA-206ENST00000372077 ASXL1Q8IXJ9 1541 aa25.75■■□□□ 1.71
VEGFA-206ENST00000372077 PLEKHG1Q9ULL1 1385 aa25.74■■□□□ 1.71
VEGFA-206ENST00000372077 SETD1AO15047 1707 aaKnown RBP25.73■■□□□ 1.71
VEGFA-206ENST00000372077 TMEM132EQ6IEE7 984 aa25.73■■□□□ 1.71
VEGFA-206ENST00000372077 C11orf95C9JLR9 678 aaPredicted RBP25.7■■□□□ 1.71
VEGFA-206ENST00000372077 EIF3AQ14152 1382 aaKnown RBP25.7■■□□□ 1.7
VEGFA-206ENST00000372077 SENP3Q9H4L4 574 aaPredicted RBP25.69■■□□□ 1.7
VEGFA-206ENST00000372077 TESK2Q96S53 571 aa25.68■■□□□ 1.7
VEGFA-206ENST00000372077 WASHC2AQ641Q2 1341 aa25.68■■□□□ 1.7
VEGFA-206ENST00000372077 POLR1AO95602 1720 aaPredicted RBP25.68■■□□□ 1.7
VEGFA-206ENST00000372077 ADAMTS13Q76LX8 1427 aa25.67■■□□□ 1.7
VEGFA-206ENST00000372077 MED14O60244 1454 aa25.66■■□□□ 1.7
VEGFA-206ENST00000372077 CCDC7Q96M83 1385 aa25.65■■□□□ 1.7
VEGFA-206ENST00000372077 YTHDC2Q9H6S0 1430 aaKnown RBP25.65■■□□□ 1.7
VEGFA-206ENST00000372077 TRAK1Q9UPV9 953 aa25.64■■□□□ 1.7
VEGFA-206ENST00000372077 ANKLE2Q86XL3 938 aa25.64■■□□□ 1.69
VEGFA-206ENST00000372077 KIF7Q2M1P5 1343 aa25.63■■□□□ 1.69
VEGFA-206ENST00000372077 BCANQ96GW7 911 aa25.62■■□□□ 1.69
VEGFA-206ENST00000372077 METP08581 1390 aa25.62■■□□□ 1.69
VEGFA-206ENST00000372077 ARHGEF28Q8N1W1 1705 aaKnown RBP25.62■■□□□ 1.69
VEGFA-206ENST00000372077 LRPPRCP42704 1394 aaKnown RBP25.61■■□□□ 1.69
VEGFA-206ENST00000372077 TBX22Q9Y458 520 aa25.59■■□□□ 1.69
VEGFA-206ENST00000372077 SBNO2Q9Y2G9 1366 aa25.59■■□□□ 1.69
VEGFA-206ENST00000372077 DIP2AQ14689 1571 aa25.59■■□□□ 1.69
VEGFA-206ENST00000372077 CENPJQ9HC77 1338 aaPredicted RBP25.59■■□□□ 1.69
VEGFA-206ENST00000372077 DDX10Q13206 875 aaKnown RBP25.59■■□□□ 1.69
VEGFA-206ENST00000372077 ABCC11Q96J66 1382 aa25.58■■□□□ 1.69
VEGFA-206ENST00000372077 DLC1Q96QB1 1528 aa25.58■■□□□ 1.68
VEGFA-206ENST00000372077 STK26Q9P289 416 aa25.57■■□□□ 1.68
VEGFA-206ENST00000372077 SLC24A1O60721 1099 aa25.57■■□□□ 1.68
VEGFA-206ENST00000372077 TMF1P82094 1093 aa25.56■■□□□ 1.68
VEGFA-206ENST00000372077 DISP3Q9P2K9 1392 aa25.55■■□□□ 1.68
VEGFA-206ENST00000372077 SLC26A8Q96RN1 970 aa25.55■■□□□ 1.68
VEGFA-206ENST00000372077 KNDC1Q76NI1 1749 aa25.54■■□□□ 1.68
VEGFA-206ENST00000372077 QRICH2Q9H0J4 1663 aa25.54■■□□□ 1.68
VEGFA-206ENST00000372077 TECPR2O15040 1411 aa25.54■■□□□ 1.68
VEGFA-206ENST00000372077 SIRT1Q96EB6 747 aa25.52■■□□□ 1.68
VEGFA-206ENST00000372077 LMTK3Q96Q04 1460 aa25.51■■□□□ 1.67
VEGFA-206ENST00000372077 NPHP4O75161 1426 aaPredicted RBP25.5■■□□□ 1.67
VEGFA-206ENST00000372077 PTPRUQ92729 1446 aa25.49■■□□□ 1.67
VEGFA-206ENST00000372077 CPS1P31327 1500 aa25.49■■□□□ 1.67
VEGFA-206ENST00000372077 PIK3R4Q99570 1358 aa25.49■■□□□ 1.67
VEGFA-206ENST00000372077 PRAM1Q96QH2 718 aa25.49■■□□□ 1.67
VEGFA-206ENST00000372077 NCKAP5LQ9HCH0 1330 aa25.48■■□□□ 1.67
VEGFA-206ENST00000372077 FAM135BQ49AJ0 1406 aa25.48■■□□□ 1.67
VEGFA-206ENST00000372077 CDCA8Q53HL2 280 aa25.47■■□□□ 1.67
VEGFA-206ENST00000372077 POGKQ9P215 609 aa25.45■■□□□ 1.67
VEGFA-206ENST00000372077 POLR3GLQ9BT43 218 aa25.45■■□□□ 1.66
VEGFA-206ENST00000372077 PLEKHH1Q9ULM0 1364 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms