RNA–Protein interactions for RNA: ENST00000369709.3

RAP1A-202, Transcript of RAP1A, member of RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAP1A, Length 5,024 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1A-202ENST00000369709 DUSP27Q5VZP5 1158 aa15.27■□□□□ 0.04
RAP1A-202ENST00000369709 SLFN5Q08AF3 891 aa15.27■□□□□ 0.03
RAP1A-202ENST00000369709 TBC1D32Q96NH3 1257 aa15.27■□□□□ 0.03
RAP1A-202ENST00000369709 ZNF592Q92610 1267 aa15.26■□□□□ 0.03
RAP1A-202ENST00000369709 PHF14O94880 888 aa15.25■□□□□ 0.03
RAP1A-202ENST00000369709 GOLGA6L4A6NEF3 574 aa15.25■□□□□ 0.03
RAP1A-202ENST00000369709 MCCP23508 829 aa15.25■□□□□ 0.03
RAP1A-202ENST00000369709 ANKRD30BQ9BXX2 1392 aa15.25■□□□□ 0.03
RAP1A-202ENST00000369709 HNRNPMP52272 730 aaKnown RBP eCLIP15.25■□□□□ 0.03
RAP1A-202ENST00000369709 NUCB2P80303 420 aa15.24■□□□□ 0.03
RAP1A-202ENST00000369709 DHX29Q7Z478 1369 aaKnown RBP15.24■□□□□ 0.03
RAP1A-202ENST00000369709 DDX19BQ9UMR2 479 aa15.24■□□□□ 0.03
RAP1A-202ENST00000369709 SSFA2P28290 1259 aa15.23■□□□□ 0.03
RAP1A-202ENST00000369709 PDE4CQ08493 712 aa15.23■□□□□ 0.03
RAP1A-202ENST00000369709 BBXQ8WY36 941 aaPredicted RBP15.23■□□□□ 0.03
RAP1A-202ENST00000369709 CCDC144AA2RUR9 1427 aa15.23■□□□□ 0.03
RAP1A-202ENST00000369709 GOLGA6L6A8MZA4 724 aa15.22■□□□□ 0.03
RAP1A-202ENST00000369709 KDM2BQ8NHM5 1336 aa15.22■□□□□ 0.03
RAP1A-202ENST00000369709 K7ELQ4 463 aaPredicted RBP15.22■□□□□ 0.03
RAP1A-202ENST00000369709 ELL2O00472 640 aaPredicted RBP15.22■□□□□ 0.03
RAP1A-202ENST00000369709 SAFB2Q14151 953 aaKnown RBP eCLIP15.21■□□□□ 0.03
RAP1A-202ENST00000369709 SASS6Q6UVJ0 657 aa15.21■□□□□ 0.03
RAP1A-202ENST00000369709 SPDYE4A6NLX3 237 aa15.2■□□□□ 0.02
RAP1A-202ENST00000369709 SYCE3A1L190 88 aa15.2■□□□□ 0.02
RAP1A-202ENST00000369709 ZRSR1Q15695 479 aaKnown RBP15.2■□□□□ 0.02
RAP1A-202ENST00000369709 CFAP44Q96MT7 982 aa15.2■□□□□ 0.02
RAP1A-202ENST00000369709 KIF16BQ96L93 1317 aa15.2■□□□□ 0.02
RAP1A-202ENST00000369709 FGD5Q6ZNL6 1462 aa15.19■□□□□ 0.02
RAP1A-202ENST00000369709 TSPY26PQ9H489 355 aa15.19■□□□□ 0.02
RAP1A-202ENST00000369709 PEG3Q9GZU2 1588 aa15.18■□□□□ 0.02
RAP1A-202ENST00000369709 CHMP7Q8WUX9 453 aaPredicted RBP15.18■□□□□ 0.02
RAP1A-202ENST00000369709 CGNQ9P2M7 1197 aaKnown RBP15.18■□□□□ 0.02
RAP1A-202ENST00000369709 OFD1O75665 1012 aa15.18■□□□□ 0.02
RAP1A-202ENST00000369709 CIZ1Q9ULV3 898 aaPredicted RBP15.18■□□□□ 0.02
RAP1A-202ENST00000369709 CHMP3Q9Y3E7 222 aa15.18■□□□□ 0.02
RAP1A-202ENST00000369709 LRPPRCP42704 1394 aaKnown RBP15.18■□□□□ 0.02
RAP1A-202ENST00000369709 PPP4R3BQ5MIZ7 849 aa15.17■□□□□ 0.02
RAP1A-202ENST00000369709 HMGN5P82970 282 aaKnown RBP15.17■□□□□ 0.02
RAP1A-202ENST00000369709 C1orf115Q9H7X2 142 aa15.17■□□□□ 0.02
RAP1A-202ENST00000369709 TRIM6-TRIM34B2RNG4 842 aa15.17■□□□□ 0.02
RAP1A-202ENST00000369709 RUNDC1Q96C34 613 aa15.16■□□□□ 0.02
RAP1A-202ENST00000369709 TAOK2Q9UL54 1235 aa15.16■□□□□ 0.02
RAP1A-202ENST00000369709 RPRD2Q5VT52 1461 aaKnown RBP15.16■□□□□ 0.02
RAP1A-202ENST00000369709 TCP11L2Q8N4U5 519 aa15.16■□□□□ 0.02
RAP1A-202ENST00000369709 RBM27Q9P2N5 1060 aaKnown RBP15.16■□□□□ 0.02
RAP1A-202ENST00000369709 SPC24Q8NBT2 197 aa15.16■□□□□ 0.02
RAP1A-202ENST00000369709 KIAA1107Q9UPP5 1409 aa15.16■□□□□ 0.02
RAP1A-202ENST00000369709 IFT57Q9NWB7 429 aa15.16■□□□□ 0.02
RAP1A-202ENST00000369709 DYNC1I1O14576 645 aa15.15■□□□□ 0.02
RAP1A-202ENST00000369709 PDCL2Q8N4E4 241 aa15.15■□□□□ 0.02
RAP1A-202ENST00000369709 TSR2Q969E8 191 aaKnown RBP15.15■□□□□ 0.02
RAP1A-202ENST00000369709 DIAPH3Q9NSV4 1193 aa15.15■□□□□ 0.02
RAP1A-202ENST00000369709 IGSF3O75054 1194 aa15.15■□□□□ 0.02
RAP1A-202ENST00000369709 AAMPQ13685 434 aa15.15■□□□□ 0.02
RAP1A-202ENST00000369709 KIF3AQ9Y496 699 aa15.15■□□□□ 0.02
RAP1A-202ENST00000369709 RAD54L2Q9Y4B4 1467 aa15.15■□□□□ 0.02
RAP1A-202ENST00000369709 MVPQ14764 893 aaKnown RBP15.15■□□□□ 0.02
RAP1A-202ENST00000369709 FAM177BA6PVY3 158 aa15.14■□□□□ 0.01
RAP1A-202ENST00000369709 CDC45O75419 566 aa15.13■□□□□ 0.01
RAP1A-202ENST00000369709 NKTRP30414 1462 aaKnown RBP15.13■□□□□ 0.01
RAP1A-202ENST00000369709 KCNJ4P48050 445 aa15.13■□□□□ 0.01
RAP1A-202ENST00000369709 ERICH4A6NGS2 130 aa15.13■□□□□ 0.01
RAP1A-202ENST00000369709 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.12■□□□□ 0.01
RAP1A-202ENST00000369709 PCDHB15Q9Y5E8 787 aa15.12■□□□□ 0.01
RAP1A-202ENST00000369709 ZSCAN23Q3MJ62 389 aa15.11■□□□□ 0.01
RAP1A-202ENST00000369709 WWC1Q8IX03 1113 aa15.11■□□□□ 0.01
RAP1A-202ENST00000369709 ZNF830Q96NB3 372 aaPredicted RBP15.11■□□□□ 0.01
RAP1A-202ENST00000369709 NOB1Q9ULX3 412 aaKnown RBP15.11■□□□□ 0.01
RAP1A-202ENST00000369709 EXOSC9Q06265 439 aaKnown RBP15.1■□□□□ 0.01
RAP1A-202ENST00000369709 TNNQ9UQP3 1299 aa15.1■□□□□ 0.01
RAP1A-202ENST00000369709 NPHP1O15259 732 aa15.1■□□□□ 0.01
RAP1A-202ENST00000369709 BAG4O95429 457 aaKnown RBP15.1■□□□□ 0.01
RAP1A-202ENST00000369709 SMAP1Q8IYB5 467 aaPredicted RBP15.1■□□□□ 0.01
RAP1A-202ENST00000369709 ANKRD50Q9ULJ7 1429 aa15.1■□□□□ 0.01
RAP1A-202ENST00000369709 PLEKHH2Q8IVE3 1493 aa15.1■□□□□ 0.01
RAP1A-202ENST00000369709 EHBP1L1Q8N3D4 1523 aa15.1■□□□□ 0.01
RAP1A-202ENST00000369709 RILPL2Q969X0 211 aa15.1■□□□□ 0.01
RAP1A-202ENST00000369709 RARSP54136 660 aaKnown RBP15.09■□□□□ 0.01
RAP1A-202ENST00000369709 SRPK2P78362 688 aaKnown RBP15.09■□□□□ 0.01
RAP1A-202ENST00000369709 NGEFQ8N5V2 710 aa15.09■□□□□ 0.01
RAP1A-202ENST00000369709 PLEKHH1Q9ULM0 1364 aa15.09■□□□□ 0.01
RAP1A-202ENST00000369709 NINLQ9Y2I6 1382 aa15.09■□□□□ 0.01
RAP1A-202ENST00000369709 NRDCO43847 1150 aa15.09■□□□□ 0.01
RAP1A-202ENST00000369709 MBD3O95983 291 aa15.09■□□□□ 0.01
RAP1A-202ENST00000369709 RABEP1Q15276 862 aa15.09■□□□□ 0.01
RAP1A-202ENST00000369709 CCDC94Q9BW85 323 aaPredicted RBP15.09■□□□□ 0.01
RAP1A-202ENST00000369709 SUPT6HQ7KZ85 1726 aaKnown RBP15.09■□□□□ 0.01
RAP1A-202ENST00000369709 DAPK1P53355 1430 aa15.09■□□□□ 0.01
RAP1A-202ENST00000369709 FSD2A1L4K1 749 aa15.08■□□□□ 0.01
RAP1A-202ENST00000369709 CCDC66A2RUB6 948 aa15.08■□□□□ 0.01
RAP1A-202ENST00000369709 INTS3Q68E01 1043 aaKnown RBP15.08■□□□□ 0
RAP1A-202ENST00000369709 TRERF1Q96PN7 1200 aa15.08■□□□□ 0
RAP1A-202ENST00000369709 ERBB4Q15303 1308 aa15.08■□□□□ 0
RAP1A-202ENST00000369709 KLHL40Q2TBA0 621 aa15.08■□□□□ 0
RAP1A-202ENST00000369709 CHD1LQ86WJ1 897 aa15.08■□□□□ 0
RAP1A-202ENST00000369709 ERBINQ96RT1 1412 aa15.08■□□□□ 0
RAP1A-202ENST00000369709 GAS2L3Q86XJ1 694 aa15.07■□□□□ 0
RAP1A-202ENST00000369709 REC8O95072 547 aa15.07■□□□□ 0
RAP1A-202ENST00000369709 CCDC27Q2M243 656 aa15.07■□□□□ 0
RAP1A-202ENST00000369709 NAP1L2Q9ULW6 460 aaPredicted RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms