RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 VGFO15240 615 aaPredicted RBP15.6■□□□□ 0.09
BRCC3-204ENST00000369462 PRAG1Q86YV5 1406 aa15.6■□□□□ 0.09
BRCC3-204ENST00000369462 MYO3AQ8NEV4 1616 aa15.6■□□□□ 0.09
BRCC3-204ENST00000369462 THEMISQ8N1K5 641 aaPredicted RBP15.59■□□□□ 0.09
BRCC3-204ENST00000369462 NEXMIFQ5QGS0 1516 aa15.59■□□□□ 0.09
BRCC3-204ENST00000369462 UBR1Q8IWV7 1749 aa15.59■□□□□ 0.09
BRCC3-204ENST00000369462 SENP3Q9H4L4 574 aaPredicted RBP15.58■□□□□ 0.09
BRCC3-204ENST00000369462 TMEM2Q9UHN6 1383 aa15.58■□□□□ 0.08
BRCC3-204ENST00000369462 RIMS2Q9UQ26 1411 aa15.58■□□□□ 0.08
BRCC3-204ENST00000369462 CEP170BQ9Y4F5 1589 aaPredicted RBP15.57■□□□□ 0.08
BRCC3-204ENST00000369462 MYOM2P54296 1465 aa15.57■□□□□ 0.08
BRCC3-204ENST00000369462 PPLO60437 1756 aa15.57■□□□□ 0.08
BRCC3-204ENST00000369462 KDM5AP29375 1690 aaKnown RBP15.57■□□□□ 0.08
BRCC3-204ENST00000369462 IFT172Q9UG01 1749 aa15.57■□□□□ 0.08
BRCC3-204ENST00000369462 HDGFP51858 240 aaKnown RBP15.56■□□□□ 0.08
BRCC3-204ENST00000369462 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.55■□□□□ 0.08
BRCC3-204ENST00000369462 ZFYVE9O95405 1425 aa15.55■□□□□ 0.08
BRCC3-204ENST00000369462 NBPF1Q3BBV0 1214 aa15.55■□□□□ 0.08
BRCC3-204ENST00000369462 CFAP70Q5T0N1 1121 aa15.54■□□□□ 0.08
BRCC3-204ENST00000369462 TXNDC2Q86VQ3 553 aa15.54■□□□□ 0.08
BRCC3-204ENST00000369462 NRXN1Q9ULB1 1477 aa15.54■□□□□ 0.08
BRCC3-204ENST00000369462 LTKP29376 864 aa15.53■□□□□ 0.08
BRCC3-204ENST00000369462 EID1Q9Y6B2 187 aa15.53■□□□□ 0.08
BRCC3-204ENST00000369462 PIK3C2GO75747 1445 aa15.53■□□□□ 0.08
BRCC3-204ENST00000369462 ROCK2O75116 1388 aaKnown RBP15.53■□□□□ 0.08
BRCC3-204ENST00000369462 RALGAPBQ86X10 1494 aa15.52■□□□□ 0.08
BRCC3-204ENST00000369462 CARD11Q9BXL7 1154 aa15.52■□□□□ 0.07
BRCC3-204ENST00000369462 ZNF142P52746 1687 aaPredicted RBP15.51■□□□□ 0.07
BRCC3-204ENST00000369462 SLIT1O75093 1534 aa15.51■□□□□ 0.07
BRCC3-204ENST00000369462 ARHGAP23Q9P227 1491 aa15.51■□□□□ 0.07
BRCC3-204ENST00000369462 C14orf93Q9H972 538 aaKnown RBP15.51■□□□□ 0.07
BRCC3-204ENST00000369462 BCANQ96GW7 911 aa15.5■□□□□ 0.07
BRCC3-204ENST00000369462 TRPM1Q7Z4N2 1603 aa15.5■□□□□ 0.07
BRCC3-204ENST00000369462 ANKLE2Q86XL3 938 aa15.49■□□□□ 0.07
BRCC3-204ENST00000369462 TMEM132EQ6IEE7 984 aa15.48■□□□□ 0.07
BRCC3-204ENST00000369462 HIRIP3Q9BW71 556 aaPredicted RBP15.48■□□□□ 0.07
BRCC3-204ENST00000369462 GPRASP1Q5JY77 1395 aa15.47■□□□□ 0.07
BRCC3-204ENST00000369462 EIF4G2P78344 907 aaKnown RBP eCLIP15.47■□□□□ 0.07
BRCC3-204ENST00000369462 SCAF11Q99590 1463 aaKnown RBP15.46■□□□□ 0.07
BRCC3-204ENST00000369462 HSPA2P54652 639 aa15.46■□□□□ 0.07
BRCC3-204ENST00000369462 PLEKHG1Q9ULL1 1385 aa15.46■□□□□ 0.06
BRCC3-204ENST00000369462 HSPA5P11021 654 aaKnown RBP15.44■□□□□ 0.06
BRCC3-204ENST00000369462 USP47Q96K76 1375 aa15.44■□□□□ 0.06
BRCC3-204ENST00000369462 KIAA1210Q9ULL0 1709 aa15.44■□□□□ 0.06
BRCC3-204ENST00000369462 SLC26A8Q96RN1 970 aa15.44■□□□□ 0.06
BRCC3-204ENST00000369462 ALKQ9UM73 1620 aa15.43■□□□□ 0.06
BRCC3-204ENST00000369462 KCNA4P22459 653 aa15.43■□□□□ 0.06
BRCC3-204ENST00000369462 LMTK3Q96Q04 1460 aa15.43■□□□□ 0.06
BRCC3-204ENST00000369462 NCKAP5LQ9HCH0 1330 aa15.43■□□□□ 0.06
BRCC3-204ENST00000369462 SETBP1Q9Y6X0 1596 aa15.42■□□□□ 0.06
BRCC3-204ENST00000369462 ZNF316A6NFI3 1004 aaPredicted RBP15.41■□□□□ 0.06
BRCC3-204ENST00000369462 NRXN3Q9Y4C0 1643 aa15.41■□□□□ 0.06
BRCC3-204ENST00000369462 ADAMTS13Q76LX8 1427 aa15.41■□□□□ 0.06
BRCC3-204ENST00000369462 TRAK1Q9UPV9 953 aa15.41■□□□□ 0.06
BRCC3-204ENST00000369462 LAMC1P11047 1609 aa15.41■□□□□ 0.06
BRCC3-204ENST00000369462 ADGRB1O14514 1584 aa15.41■□□□□ 0.06
BRCC3-204ENST00000369462 ST20-MTHFSA0A0A6YYL1 179 aa15.4■□□□□ 0.06
BRCC3-204ENST00000369462 STK26Q9P289 416 aa15.4■□□□□ 0.06
BRCC3-204ENST00000369462 IQGAP1P46940 1657 aa15.4■□□□□ 0.06
BRCC3-204ENST00000369462 METP08581 1390 aa15.4■□□□□ 0.06
BRCC3-204ENST00000369462 TBX22Q9Y458 520 aa15.39■□□□□ 0.05
BRCC3-204ENST00000369462 ASXL1Q8IXJ9 1541 aa15.38■□□□□ 0.05
BRCC3-204ENST00000369462 MED14O60244 1454 aa15.37■□□□□ 0.05
BRCC3-204ENST00000369462 NPHP4O75161 1426 aaPredicted RBP15.37■□□□□ 0.05
BRCC3-204ENST00000369462 YTHDC2Q9H6S0 1430 aaKnown RBP15.37■□□□□ 0.05
BRCC3-204ENST00000369462 SETD1AO15047 1707 aaKnown RBP15.36■□□□□ 0.05
BRCC3-204ENST00000369462 EIF3AQ14152 1382 aaKnown RBP15.35■□□□□ 0.05
BRCC3-204ENST00000369462 POLR1AO95602 1720 aaPredicted RBP15.35■□□□□ 0.05
BRCC3-204ENST00000369462 LRPPRCP42704 1394 aaKnown RBP15.34■□□□□ 0.05
BRCC3-204ENST00000369462 CENPJQ9HC77 1338 aaPredicted RBP15.33■□□□□ 0.04
BRCC3-204ENST00000369462 ABCC11Q96J66 1382 aa15.33■□□□□ 0.04
BRCC3-204ENST00000369462 SAFB2Q14151 953 aaKnown RBP eCLIP15.32■□□□□ 0.045e-6■□□□□ 11
BRCC3-204ENST00000369462 TESK2Q96S53 571 aa15.32■□□□□ 0.04
BRCC3-204ENST00000369462 DIP2AQ14689 1571 aa15.32■□□□□ 0.04
BRCC3-204ENST00000369462 AMOTL2Q9Y2J4 779 aa15.32■□□□□ 0.04
BRCC3-204ENST00000369462 PRAM1Q96QH2 718 aa15.31■□□□□ 0.04
BRCC3-204ENST00000369462 POGKQ9P215 609 aa15.31■□□□□ 0.04
BRCC3-204ENST00000369462 C11orf95C9JLR9 678 aaPredicted RBP15.31■□□□□ 0.04
BRCC3-204ENST00000369462 PTPRUQ92729 1446 aa15.31■□□□□ 0.04
BRCC3-204ENST00000369462 WAPLQ7Z5K2 1190 aa15.3■□□□□ 0.04
BRCC3-204ENST00000369462 PIK3R4Q99570 1358 aa15.29■□□□□ 0.04
BRCC3-204ENST00000369462 STRCQ7RTU9 1775 aa15.28■□□□□ 0.04
BRCC3-204ENST00000369462 ARHGEF28Q8N1W1 1705 aaKnown RBP15.28■□□□□ 0.04
BRCC3-204ENST00000369462 KCNA6P17658 529 aa15.28■□□□□ 0.04
BRCC3-204ENST00000369462 TECPR2O15040 1411 aa15.28■□□□□ 0.04
BRCC3-204ENST00000369462 POLR3GLQ9BT43 218 aa15.27■□□□□ 0.04
BRCC3-204ENST00000369462 ROBO2Q9HCK4 1378 aa15.27■□□□□ 0.04
BRCC3-204ENST00000369462 WASHC2AQ641Q2 1341 aa15.27■□□□□ 0.04
BRCC3-204ENST00000369462 TMF1P82094 1093 aa15.27■□□□□ 0.03
BRCC3-204ENST00000369462 PLEKHH1Q9ULM0 1364 aa15.27■□□□□ 0.03
BRCC3-204ENST00000369462 DLC1Q96QB1 1528 aa15.26■□□□□ 0.03
BRCC3-204ENST00000369462 SIRT1Q96EB6 747 aa15.26■□□□□ 0.03
BRCC3-204ENST00000369462 KIF7Q2M1P5 1343 aa15.26■□□□□ 0.03
BRCC3-204ENST00000369462 MINK1Q8N4C8 1332 aaPredicted RBP15.25■□□□□ 0.03
BRCC3-204ENST00000369462 DISP3Q9P2K9 1392 aa15.25■□□□□ 0.03
BRCC3-204ENST00000369462 SBNO2Q9Y2G9 1366 aa15.25■□□□□ 0.03
BRCC3-204ENST00000369462 FAM135BQ49AJ0 1406 aa15.25■□□□□ 0.03
BRCC3-204ENST00000369462 CCDC7Q96M83 1385 aa15.24■□□□□ 0.03
BRCC3-204ENST00000369462 CPS1P31327 1500 aa15.24■□□□□ 0.03
BRCC3-204ENST00000369462 DMRT2Q9Y5R5 561 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms