RNA–Protein interactions for RNA: ENST00000369278.4

UFL1-201, Transcript of UFM1 specific ligase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFL1, Length 4,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFL1-201ENST00000369278 CFAP53Q96M91 514 aa9.52□□□□□ -0.89
UFL1-201ENST00000369278 SSFA2P28290 1259 aa9.51□□□□□ -0.89
UFL1-201ENST00000369278 GNL2Q13823 731 aaKnown RBP9.51□□□□□ -0.89
UFL1-201ENST00000369278 GORABQ5T7V8 394 aa9.51□□□□□ -0.89
UFL1-201ENST00000369278 ERBB4Q15303 1308 aa9.51□□□□□ -0.89
UFL1-201ENST00000369278 CSPP1Q1MSJ5 1256 aa9.51□□□□□ -0.89
UFL1-201ENST00000369278 CCDC27Q2M243 656 aa9.51□□□□□ -0.89
UFL1-201ENST00000369278 ZNF526Q8TF50 670 aaPredicted RBP9.51□□□□□ -0.89
UFL1-201ENST00000369278 PTPRKQ15262 1439 aa9.51□□□□□ -0.89
UFL1-201ENST00000369278 NCOA1Q15788 1441 aa9.51□□□□□ -0.89
UFL1-201ENST00000369278 FGD1P98174 961 aa9.51□□□□□ -0.89
UFL1-201ENST00000369278 IBSPP21815 317 aaPredicted RBP9.51□□□□□ -0.89
UFL1-201ENST00000369278 KIF15Q9NS87 1388 aa9.51□□□□□ -0.89
UFL1-201ENST00000369278 IGHDP01880 384 aa9.5□□□□□ -0.89
UFL1-201ENST00000369278 LRRC9Q6ZRR7 1453 aa9.5□□□□□ -0.89
UFL1-201ENST00000369278 TULP1O00294 542 aaPredicted RBP9.5□□□□□ -0.89
UFL1-201ENST00000369278 TNPO1Q92973 898 aaKnown RBP9.5□□□□□ -0.89
UFL1-201ENST00000369278 C8orf34Q49A92 452 aa9.49□□□□□ -0.89
UFL1-201ENST00000369278 PDCL2Q8N4E4 241 aa9.49□□□□□ -0.89
UFL1-201ENST00000369278 SYAP1Q96A49 352 aaPredicted RBP9.49□□□□□ -0.89
UFL1-201ENST00000369278 GDPD2Q9HCC8 539 aa9.49□□□□□ -0.89
UFL1-201ENST00000369278 DENND4BO75064 1496 aaPredicted RBP9.49□□□□□ -0.89
UFL1-201ENST00000369278 C17orf53Q8N3J3 647 aaPredicted RBP9.49□□□□□ -0.89
UFL1-201ENST00000369278 PDIA4P13667 645 aaKnown RBP9.49□□□□□ -0.89
UFL1-201ENST00000369278 CGNL1Q0VF96 1302 aa9.49□□□□□ -0.89
UFL1-201ENST00000369278 FOSBP53539 338 aa9.48□□□□□ -0.89
UFL1-201ENST00000369278 SLC4A10Q6U841 1118 aa9.48□□□□□ -0.89
UFL1-201ENST00000369278 RILPL2Q969X0 211 aa9.48□□□□□ -0.89
UFL1-201ENST00000369278 ERICH3Q5RHP9 1530 aa9.48□□□□□ -0.89
UFL1-201ENST00000369278 TNNT1P13805 278 aa9.48□□□□□ -0.89
UFL1-201ENST00000369278 CCDC18Q5T9S5 1454 aa9.48□□□□□ -0.89
UFL1-201ENST00000369278 FMN1Q68DA7 1419 aa9.47□□□□□ -0.89
UFL1-201ENST00000369278 MAP3K1Q13233 1512 aa9.47□□□□□ -0.89
UFL1-201ENST00000369278 DHX29Q7Z478 1369 aaKnown RBP9.47□□□□□ -0.89
UFL1-201ENST00000369278 CCDC39Q9UFE4 941 aa9.47□□□□□ -0.89
UFL1-201ENST00000369278 FHOD3Q2V2M9 1422 aa9.47□□□□□ -0.89
UFL1-201ENST00000369278 DTNBO60941 627 aa9.47□□□□□ -0.89
UFL1-201ENST00000369278 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.47□□□□□ -0.89
UFL1-201ENST00000369278 V9GYY5 206 aaPredicted RBP9.47□□□□□ -0.89
UFL1-201ENST00000369278 ST18O60284 1047 aa9.46□□□□□ -0.89
UFL1-201ENST00000369278 RBM42Q9BTD8 480 aaKnown RBP9.46□□□□□ -0.89
UFL1-201ENST00000369278 PATL2C9JE40 543 aaKnown RBP9.46□□□□□ -0.89
UFL1-201ENST00000369278 OS9Q13438 667 aaPredicted RBP9.46□□□□□ -0.89
UFL1-201ENST00000369278 KIF3AQ9Y496 699 aa9.46□□□□□ -0.89
UFL1-201ENST00000369278 FIBPO43427 364 aa9.46□□□□□ -0.9
UFL1-201ENST00000369278 JARID2Q92833 1246 aaPredicted RBP9.45□□□□□ -0.9
UFL1-201ENST00000369278 TSR2Q969E8 191 aaKnown RBP9.45□□□□□ -0.9
UFL1-201ENST00000369278 NUTM2DQ5VT03 806 aaPredicted RBP9.45□□□□□ -0.9
UFL1-201ENST00000369278 CREBRFQ8IUR6 639 aa9.45□□□□□ -0.9
UFL1-201ENST00000369278 TMX1Q9H3N1 280 aa9.45□□□□□ -0.9
UFL1-201ENST00000369278 USP25Q9UHP3 1055 aa9.45□□□□□ -0.9
UFL1-201ENST00000369278 KIF27Q86VH2 1401 aa9.45□□□□□ -0.9
UFL1-201ENST00000369278 TTC12Q9H892 705 aaPredicted RBP9.45□□□□□ -0.9
UFL1-201ENST00000369278 ZNF644Q9H582 1327 aaPredicted RBP9.45□□□□□ -0.9
UFL1-201ENST00000369278 VPS37CA5D8V6 355 aaPredicted RBP9.45□□□□□ -0.9
UFL1-201ENST00000369278 ZKSCAN2Q63HK3 967 aa9.45□□□□□ -0.9
UFL1-201ENST00000369278 TNNQ9UQP3 1299 aa9.45□□□□□ -0.9
UFL1-201ENST00000369278 NUP155O75694 1391 aa9.44□□□□□ -0.9
UFL1-201ENST00000369278 MTERF4Q7Z6M4 381 aaKnown RBP9.44□□□□□ -0.9
UFL1-201ENST00000369278 DZIP1LQ8IYY4 767 aaKnown RBP9.44□□□□□ -0.9
UFL1-201ENST00000369278 GOLGA6L6A8MZA4 724 aa9.44□□□□□ -0.9
UFL1-201ENST00000369278 ZBTB22O15209 634 aa9.44□□□□□ -0.9
UFL1-201ENST00000369278 GPATCH11Q8N954 259 aa9.44□□□□□ -0.9
UFL1-201ENST00000369278 RTF1Q92541 710 aaKnown RBP9.44□□□□□ -0.9
UFL1-201ENST00000369278 ZNF428Q96B54 188 aa9.44□□□□□ -0.9
UFL1-201ENST00000369278 LARP6Q9BRS8 491 aaKnown RBP9.44□□□□□ -0.9
UFL1-201ENST00000369278 UACAQ9BZF9 1416 aa9.43□□□□□ -0.9
UFL1-201ENST00000369278 HSP90B1P14625 803 aaKnown RBP9.43□□□□□ -0.9
UFL1-201ENST00000369278 TPD52L1Q16890 204 aaPredicted RBP9.43□□□□□ -0.9
UFL1-201ENST00000369278 NBPF1Q3BBV0 1214 aa9.43□□□□□ -0.9
UFL1-201ENST00000369278 HOMER1Q86YM7 354 aa9.43□□□□□ -0.9
UFL1-201ENST00000369278 POLR3GO15318 223 aaPredicted RBP9.43□□□□□ -0.9
UFL1-201ENST00000369278 FAM177A1Q8N128 213 aaPredicted RBP9.43□□□□□ -0.9
UFL1-201ENST00000369278 CHAMP1Q96JM3 812 aa9.43□□□□□ -0.9
UFL1-201ENST00000369278 ANO2Q9NQ90 1003 aa9.43□□□□□ -0.9
UFL1-201ENST00000369278 USP19O94966 1318 aa9.43□□□□□ -0.9
UFL1-201ENST00000369278 IPO4Q8TEX9 1081 aaKnown RBP9.42□□□□□ -0.9
UFL1-201ENST00000369278 C16orf45Q96MC5 204 aaPredicted RBP9.42□□□□□ -0.9
UFL1-201ENST00000369278 TOMM22Q9NS69 142 aa9.42□□□□□ -0.9
UFL1-201ENST00000369278 STK26Q9P289 416 aa9.42□□□□□ -0.9
UFL1-201ENST00000369278 CCDC9Q9Y3X0 531 aaKnown RBP9.42□□□□□ -0.9
UFL1-201ENST00000369278 MCCP23508 829 aa9.42□□□□□ -0.9
UFL1-201ENST00000369278 NEK4P51957 841 aa9.42□□□□□ -0.9
UFL1-201ENST00000369278 PTPN23Q9H3S7 1636 aa9.42□□□□□ -0.9
UFL1-201ENST00000369278 GTF2F1P35269 517 aaKnown RBP eCLIP9.42□□□□□ -0.9
UFL1-201ENST00000369278 SASS6Q6UVJ0 657 aa9.42□□□□□ -0.9
UFL1-201ENST00000369278 FMNL2Q96PY5 1086 aa9.42□□□□□ -0.9
UFL1-201ENST00000369278 NRDCO43847 1150 aa9.42□□□□□ -0.9
UFL1-201ENST00000369278 GAS2L3Q86XJ1 694 aa9.42□□□□□ -0.9
UFL1-201ENST00000369278 CARMIL1Q5VZK9 1371 aa9.41□□□□□ -0.9
UFL1-201ENST00000369278 DIAPH3Q9NSV4 1193 aa9.41□□□□□ -0.9
UFL1-201ENST00000369278 TOP2BQ02880 1626 aa9.41□□□□□ -0.9
UFL1-201ENST00000369278 TRIM5Q9C035 493 aa9.41□□□□□ -0.9
UFL1-201ENST00000369278 TSPY26PQ9H489 355 aa9.41□□□□□ -0.9
UFL1-201ENST00000369278 BCORL1Q5H9F3 1711 aa9.41□□□□□ -0.9
UFL1-201ENST00000369278 IPO8O15397 1037 aaKnown RBP9.41□□□□□ -0.9
UFL1-201ENST00000369278 KDM2BQ8NHM5 1336 aa9.41□□□□□ -0.9
UFL1-201ENST00000369278 SPATA31E1Q6ZUB1 1445 aa9.4□□□□□ -0.9
UFL1-201ENST00000369278 CCDC66A2RUB6 948 aa9.4□□□□□ -0.9
UFL1-201ENST00000369278 BECN2A8MW95 431 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms