RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 RCCD1A6NED2 376 aa9.25□□□□□ -0.93
ECHDC1-204ENST00000368292 GOLGA8CPA6NN73 597 aa9.24□□□□□ -0.93
ECHDC1-204ENST00000368292 WNT2BQ93097 391 aa9.24□□□□□ -0.93
ECHDC1-204ENST00000368292 SLC24A3Q9HC58 644 aa9.24□□□□□ -0.93
ECHDC1-204ENST00000368292 DNAJB2P25686 324 aa9.23□□□□□ -0.93
ECHDC1-204ENST00000368292 SAMD7Q7Z3H4 446 aa9.23□□□□□ -0.93
ECHDC1-204ENST00000368292 NLRP7Q8WX94 980 aa9.23□□□□□ -0.93
ECHDC1-204ENST00000368292 RNF166Q96A37 237 aaPredicted RBP9.23□□□□□ -0.93
ECHDC1-204ENST00000368292 KCTD12Q96CX2 325 aaKnown RBP9.23□□□□□ -0.93
ECHDC1-204ENST00000368292 TMEM134Q9H6X4 195 aa9.23□□□□□ -0.93
ECHDC1-204ENST00000368292 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.22□□□□□ -0.93
ECHDC1-204ENST00000368292 SWT1Q5T5J6 900 aaKnown RBP9.22□□□□□ -0.93
ECHDC1-204ENST00000368292 SOWAHBA6NEL2 793 aa9.21□□□□□ -0.94
ECHDC1-204ENST00000368292 BCAMP50895 628 aa9.21□□□□□ -0.94
ECHDC1-204ENST00000368292 THSD4Q6ZMP0 1018 aa9.21□□□□□ -0.94
ECHDC1-204ENST00000368292 ANKK1Q8NFD2 765 aa9.21□□□□□ -0.94
ECHDC1-204ENST00000368292 AK7Q96M32 723 aa9.21□□□□□ -0.94
ECHDC1-204ENST00000368292 NESP48681 1621 aa9.2□□□□□ -0.94
ECHDC1-204ENST00000368292 TRIM66O15016 1216 aa9.2□□□□□ -0.94
ECHDC1-204ENST00000368292 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.19□□□□□ -0.94
ECHDC1-204ENST00000368292 LRCH3Q96II8 777 aa9.18□□□□□ -0.94
ECHDC1-204ENST00000368292 AMHR2Q16671 573 aa9.17□□□□□ -0.94
ECHDC1-204ENST00000368292 TMUB1Q9BVT8 246 aa9.17□□□□□ -0.94
ECHDC1-204ENST00000368292 REPIN1Q9BWE0 567 aaKnown RBP9.17□□□□□ -0.94
ECHDC1-204ENST00000368292 HDGFP51858 240 aaKnown RBP9.16□□□□□ -0.94
ECHDC1-204ENST00000368292 MDM2Q00987 491 aaPredicted RBP9.16□□□□□ -0.94
ECHDC1-204ENST00000368292 PLSCR2Q9NRY7 297 aa9.16□□□□□ -0.94
ECHDC1-204ENST00000368292 PTPN5P54829 565 aa9.14□□□□□ -0.95
ECHDC1-204ENST00000368292 WBP1LQ9NX94 342 aa9.14□□□□□ -0.95
ECHDC1-204ENST00000368292 TSR3Q9UJK0 312 aaKnown RBP9.14□□□□□ -0.95
ECHDC1-204ENST00000368292 HPS5Q9UPZ3 1129 aa9.14□□□□□ -0.95
ECHDC1-204ENST00000368292 BAZ1AQ9NRL2 1556 aaPredicted RBP9.13□□□□□ -0.95
ECHDC1-204ENST00000368292 SLC10A3P09131 477 aa9.13□□□□□ -0.95
ECHDC1-204ENST00000368292 SLF2Q8IX21 1173 aa9.13□□□□□ -0.95
ECHDC1-204ENST00000368292 PDE4DQ08499 809 aa9.12□□□□□ -0.95
ECHDC1-204ENST00000368292 GPCPD1Q9NPB8 672 aa9.12□□□□□ -0.95
ECHDC1-204ENST00000368292 HCSTQ9UBK5 93 aa9.12□□□□□ -0.95
ECHDC1-204ENST00000368292 RIMBP3CA6NJZ7 1639 aa9.12□□□□□ -0.95
ECHDC1-204ENST00000368292 RIMBP3BA6NNM3 1639 aa9.12□□□□□ -0.95
ECHDC1-204ENST00000368292 RIMBP3Q9UFD9 1639 aa9.12□□□□□ -0.95
ECHDC1-204ENST00000368292 CLCN1P35523 988 aa9.11□□□□□ -0.95
ECHDC1-204ENST00000368292 PPP4CP60510 307 aa9.11□□□□□ -0.95
ECHDC1-204ENST00000368292 PARP9Q8IXQ6 854 aa9.11□□□□□ -0.95
ECHDC1-204ENST00000368292 RNF40O75150 1001 aa9.1□□□□□ -0.95
ECHDC1-204ENST00000368292 FAM217BQ9NTX9 383 aaPredicted RBP9.1□□□□□ -0.95
ECHDC1-204ENST00000368292 SMARCA2P51531 1590 aa9.1□□□□□ -0.95
ECHDC1-204ENST00000368292 DDX11L8A8MPP1 907 aa9.09□□□□□ -0.95
ECHDC1-204ENST00000368292 TTLL12Q14166 644 aaPredicted RBP9.08□□□□□ -0.96
ECHDC1-204ENST00000368292 GIGYF2Q6Y7W6 1299 aaKnown RBP9.08□□□□□ -0.96
ECHDC1-204ENST00000368292 KIF21AQ7Z4S6 1674 aa9.07□□□□□ -0.96
ECHDC1-204ENST00000368292 CD46P15529 392 aa9.07□□□□□ -0.96
ECHDC1-204ENST00000368292 SLC4A3P48751 1232 aa9.07□□□□□ -0.96
ECHDC1-204ENST00000368292 APLP1P51693 650 aa9.07□□□□□ -0.96
ECHDC1-204ENST00000368292 SULF1Q8IWU6 871 aa9.07□□□□□ -0.96
ECHDC1-204ENST00000368292 SSTR3P32745 418 aaPredicted RBP9.06□□□□□ -0.96
ECHDC1-204ENST00000368292 NYAP1Q6ZVC0 841 aa9.06□□□□□ -0.96
ECHDC1-204ENST00000368292 NCAPD3P42695 1498 aa9.05□□□□□ -0.96
ECHDC1-204ENST00000368292 CFHP08603 1231 aa9.05□□□□□ -0.96
ECHDC1-204ENST00000368292 MS4A1P11836 297 aa9.05□□□□□ -0.96
ECHDC1-204ENST00000368292 RDH13Q8NBN7 331 aa9.05□□□□□ -0.96
ECHDC1-204ENST00000368292 NECTIN2Q92692 538 aa9.05□□□□□ -0.96
ECHDC1-204ENST00000368292 GCGRP47871 477 aa9.04□□□□□ -0.96
ECHDC1-204ENST00000368292 GPBP1L1Q9HC44 474 aaPredicted RBP9.04□□□□□ -0.96
ECHDC1-204ENST00000368292 RSPH4AQ5TD94 716 aa9.03□□□□□ -0.96
ECHDC1-204ENST00000368292 DCAF1Q9Y4B6 1507 aa9.03□□□□□ -0.96
ECHDC1-204ENST00000368292 ACTN4O43707 911 aaKnown RBP9.02□□□□□ -0.97
ECHDC1-204ENST00000368292 BRPF1P55201 1214 aaPredicted RBP9.01□□□□□ -0.97
ECHDC1-204ENST00000368292 KDM4CQ9H3R0 1056 aa9.01□□□□□ -0.97
ECHDC1-204ENST00000368292 ARHGEF11O15085 1522 aa9□□□□□ -0.97
ECHDC1-204ENST00000368292 KMT5BQ4FZB7 885 aa9□□□□□ -0.97
ECHDC1-204ENST00000368292 TJAP1Q5JTD0 557 aa8.99□□□□□ -0.97
ECHDC1-204ENST00000368292 BEGAINQ9BUH8 593 aa8.99□□□□□ -0.97
ECHDC1-204ENST00000368292 PRR14Q9BWN1 585 aa8.99□□□□□ -0.97
ECHDC1-204ENST00000368292 ZCCHC6Q5VYS8 1495 aaKnown RBP8.99□□□□□ -0.97
ECHDC1-204ENST00000368292 FUT2Q10981 343 aa8.98□□□□□ -0.97
ECHDC1-204ENST00000368292 TMEM132AQ24JP5 1023 aa8.98□□□□□ -0.97
ECHDC1-204ENST00000368292 KDM4AO75164 1064 aa8.97□□□□□ -0.97
ECHDC1-204ENST00000368292 PCDHB3Q9Y5E6 796 aa8.97□□□□□ -0.97
ECHDC1-204ENST00000368292 TTBK1Q5TCY1 1321 aaPredicted RBP8.97□□□□□ -0.97
ECHDC1-204ENST00000368292 ITGBL1O95965 494 aaPredicted RBP8.96□□□□□ -0.98
ECHDC1-204ENST00000368292 NEUROD2Q15784 382 aa8.96□□□□□ -0.98
ECHDC1-204ENST00000368292 BLOC1S3Q6QNY0 202 aa8.96□□□□□ -0.98
ECHDC1-204ENST00000368292 MTRQ99707 1265 aa8.96□□□□□ -0.98
ECHDC1-204ENST00000368292 LAMC3Q9Y6N6 1575 aa8.95□□□□□ -0.98
ECHDC1-204ENST00000368292 ATP6V1AP38606 617 aa8.95□□□□□ -0.98
ECHDC1-204ENST00000368292 PUS10Q3MIT2 529 aaKnown RBP8.95□□□□□ -0.98
ECHDC1-204ENST00000368292 MORN1Q5T089 497 aa8.95□□□□□ -0.98
ECHDC1-204ENST00000368292 SPIRE2Q8WWL2 714 aa8.95□□□□□ -0.98
ECHDC1-204ENST00000368292 FAM117AQ9C073 453 aa8.95□□□□□ -0.98
ECHDC1-204ENST00000368292 GTF3C3Q9Y5Q9 886 aa8.95□□□□□ -0.98
ECHDC1-204ENST00000368292 COPS2P61201 443 aa8.94□□□□□ -0.98
ECHDC1-204ENST00000368292 ZNF516Q92618 1163 aa8.94□□□□□ -0.98
ECHDC1-204ENST00000368292 ATAD2BQ9ULI0 1458 aa8.94□□□□□ -0.98
ECHDC1-204ENST00000368292 WDR62O43379 1518 aa8.94□□□□□ -0.98
ECHDC1-204ENST00000368292 HLA-CQ95604 372 aa8.93□□□□□ -0.98
ECHDC1-204ENST00000368292 IL21Q9HBE4 155 aa8.93□□□□□ -0.98
ECHDC1-204ENST00000368292 HMGXB3Q12766 1538 aa8.93□□□□□ -0.98
ECHDC1-204ENST00000368292 PLEKHG3A1L390 1219 aa8.92□□□□□ -0.98
ECHDC1-204ENST00000368292 HOXA2O43364 376 aa8.92□□□□□ -0.98
ECHDC1-204ENST00000368292 USP46P62068 366 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms