RNA–Protein interactions for RNA: ENST00000366892.5

PRKN-202, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 1,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-202ENST00000366892 TRIM52Q96A61 297 aa25.41■■□□□ 1.66
PRKN-202ENST00000366892 PPP1R15AO75807 674 aaPredicted RBP25.4■■□□□ 1.66
PRKN-202ENST00000366892 SENP3Q9H4L4 574 aaPredicted RBP25.4■■□□□ 1.66
PRKN-202ENST00000366892 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.39■■□□□ 1.66
PRKN-202ENST00000366892 PIP4K2BP78356 416 aa25.38■■□□□ 1.65
PRKN-202ENST00000366892 MYO5BQ9ULV0 1848 aa25.38■■□□□ 1.65
PRKN-202ENST00000366892 KCNA6P17658 529 aa25.37■■□□□ 1.65
PRKN-202ENST00000366892 PLEKHG1Q9ULL1 1385 aa25.37■■□□□ 1.65
PRKN-202ENST00000366892 NUTM2DQ5VT03 806 aaPredicted RBP25.37■■□□□ 1.65
PRKN-202ENST00000366892 SCAF1Q9H7N4 1312 aaKnown RBP25.36■■□□□ 1.65
PRKN-202ENST00000366892 SLC4A1APQ9BWU0 796 aaKnown RBP25.33■■□□□ 1.65
PRKN-202ENST00000366892 TBX22Q9Y458 520 aa25.32■■□□□ 1.64
PRKN-202ENST00000366892 SPHKAPQ2M3C7 1700 aa25.31■■□□□ 1.64
PRKN-202ENST00000366892 ALKQ9UM73 1620 aa25.3■■□□□ 1.64
PRKN-202ENST00000366892 ZNF326Q5BKZ1 582 aaKnown RBP25.28■■□□□ 1.64
PRKN-202ENST00000366892 PROSER2Q86WR7 435 aaPredicted RBP25.28■■□□□ 1.64
PRKN-202ENST00000366892 TMEM94Q12767 1356 aa25.28■■□□□ 1.64
PRKN-202ENST00000366892 HSPA1LP34931 641 aa25.27■■□□□ 1.64
PRKN-202ENST00000366892 RBM33Q96EV2 1170 aaKnown RBP25.27■■□□□ 1.64
PRKN-202ENST00000366892 TRPM2O94759 1503 aa25.26■■□□□ 1.63
PRKN-202ENST00000366892 ADAMTS13Q76LX8 1427 aa25.25■■□□□ 1.63
PRKN-202ENST00000366892 CLTCL1P53675 1640 aa25.22■■□□□ 1.63
PRKN-202ENST00000366892 FOXD1Q16676 465 aa25.22■■□□□ 1.63
PRKN-202ENST00000366892 XIRP1Q702N8 1843 aaKnown RBP25.22■■□□□ 1.63
PRKN-202ENST00000366892 NWD1Q149M9 1564 aa25.21■■□□□ 1.63
PRKN-202ENST00000366892 NKTRP30414 1462 aaKnown RBP25.21■■□□□ 1.63
PRKN-202ENST00000366892 MPHOSPH9Q99550 1183 aa25.2■■□□□ 1.62
PRKN-202ENST00000366892 PIK3R4Q99570 1358 aa25.18■■□□□ 1.62
PRKN-202ENST00000366892 CHD2O14647 1828 aaKnown RBP25.17■■□□□ 1.62
PRKN-202ENST00000366892 DISP3Q9P2K9 1392 aa25.17■■□□□ 1.62
PRKN-202ENST00000366892 SETD5Q9C0A6 1442 aa25.16■■□□□ 1.62
PRKN-202ENST00000366892 DIP2AQ14689 1571 aa25.15■■□□□ 1.62
PRKN-202ENST00000366892 AMOTL2Q9Y2J4 779 aa25.14■■□□□ 1.62
PRKN-202ENST00000366892 ACIN1Q9UKV3 1341 aaKnown RBP25.13■■□□□ 1.61
PRKN-202ENST00000366892 NEXMIFQ5QGS0 1516 aa25.12■■□□□ 1.61
PRKN-202ENST00000366892 KIF1BO60333 1816 aa25.12■■□□□ 1.61
PRKN-202ENST00000366892 PTPRUQ92729 1446 aa25.11■■□□□ 1.61
PRKN-202ENST00000366892 MSH6P52701 1360 aa25.11■■□□□ 1.61
PRKN-202ENST00000366892 SETBP1Q9Y6X0 1596 aa25.11■■□□□ 1.61
PRKN-202ENST00000366892 RPGRIP1LQ68CZ1 1315 aa25.1■■□□□ 1.61
PRKN-202ENST00000366892 VGFO15240 615 aaPredicted RBP25.1■■□□□ 1.61
PRKN-202ENST00000366892 NRXN3Q9Y4C0 1643 aa25.09■■□□□ 1.61
PRKN-202ENST00000366892 FAM135BQ49AJ0 1406 aa25.09■■□□□ 1.61
PRKN-202ENST00000366892 NCOA3Q9Y6Q9 1424 aa25.08■■□□□ 1.61
PRKN-202ENST00000366892 METP08581 1390 aa25.08■■□□□ 1.61
PRKN-202ENST00000366892 RAB3GAP2Q9H2M9 1393 aa25.07■■□□□ 1.6
PRKN-202ENST00000366892 C14orf37Q86TY3 774 aa25.07■■□□□ 1.6
PRKN-202ENST00000366892 SLAIN2Q9P270 581 aa25.07■■□□□ 1.6
PRKN-202ENST00000366892 CCDC144AA2RUR9 1427 aa25.06■■□□□ 1.6
PRKN-202ENST00000366892 C19orf44Q9H6X5 657 aa25.05■■□□□ 1.6
PRKN-202ENST00000366892 RGL3Q3MIN7 710 aa25.02■■□□□ 1.6
PRKN-202ENST00000366892 ILDR2Q71H61 639 aa25.01■■□□□ 1.59
PRKN-202ENST00000366892 TRIM26Q12899 539 aaPredicted RBP25■■□□□ 1.59
PRKN-202ENST00000366892 SPATA31E1Q6ZUB1 1445 aa24.99■■□□□ 1.59
PRKN-202ENST00000366892 CADPS2Q86UW7 1296 aa24.99■■□□□ 1.59
PRKN-202ENST00000366892 ATF3P18847 181 aa24.98■■□□□ 1.59
PRKN-202ENST00000366892 XRN1Q8IZH2 1706 aaKnown RBP24.97■■□□□ 1.59
PRKN-202ENST00000366892 ROBO1Q9Y6N7 1651 aa24.96■■□□□ 1.59
PRKN-202ENST00000366892 HRCP23327 699 aa24.96■■□□□ 1.59
PRKN-202ENST00000366892 ADGRF5Q8IZF2 1346 aa24.95■■□□□ 1.58
PRKN-202ENST00000366892 PPLO60437 1756 aa24.94■■□□□ 1.58
PRKN-202ENST00000366892 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.93■■□□□ 1.58
PRKN-202ENST00000366892 PCGF6Q9BYE7 350 aa24.92■■□□□ 1.58
PRKN-202ENST00000366892 ANKRD30BQ9BXX2 1392 aa24.92■■□□□ 1.58
PRKN-202ENST00000366892 MED1Q15648 1581 aaPredicted RBP24.91■■□□□ 1.58
PRKN-202ENST00000366892 SETD1AO15047 1707 aaKnown RBP24.89■■□□□ 1.57
PRKN-202ENST00000366892 DCCP43146 1447 aa24.88■■□□□ 1.57
PRKN-202ENST00000366892 ROBO2Q9HCK4 1378 aa24.87■■□□□ 1.57
PRKN-202ENST00000366892 PTCH1Q13635 1447 aa24.85■■□□□ 1.57
PRKN-202ENST00000366892 ADGRL3Q9HAR2 1447 aa24.85■■□□□ 1.57
PRKN-202ENST00000366892 BRINP3Q76B58 766 aa24.84■■□□□ 1.57
PRKN-202ENST00000366892 PHF23Q9BUL5 403 aaPredicted RBP24.83■■□□□ 1.57
PRKN-202ENST00000366892 PRAG1Q86YV5 1406 aa24.83■■□□□ 1.57
PRKN-202ENST00000366892 TMEM132EQ6IEE7 984 aa24.81■■□□□ 1.56
PRKN-202ENST00000366892 PIK3C2GO75747 1445 aa24.81■■□□□ 1.56
PRKN-202ENST00000366892 MST1RQ04912 1400 aa24.81■■□□□ 1.56
PRKN-202ENST00000366892 IFT172Q9UG01 1749 aa24.81■■□□□ 1.56
PRKN-202ENST00000366892 STK26Q9P289 416 aa24.8■■□□□ 1.56
PRKN-202ENST00000366892 PHLPP1O60346 1717 aa24.79■■□□□ 1.56
PRKN-202ENST00000366892 C14orf93Q9H972 538 aaKnown RBP24.78■■□□□ 1.56
PRKN-202ENST00000366892 JCADQ9P266 1359 aa24.78■■□□□ 1.56
PRKN-202ENST00000366892 LRPPRCP42704 1394 aaKnown RBP24.76■■□□□ 1.55
PRKN-202ENST00000366892 NALCNQ8IZF0 1738 aa24.76■■□□□ 1.55
PRKN-202ENST00000366892 SOCS7O14512 581 aa24.76■■□□□ 1.55
PRKN-202ENST00000366892 ABCC11Q96J66 1382 aa24.75■■□□□ 1.55
PRKN-202ENST00000366892 CFAP70Q5T0N1 1121 aa24.75■■□□□ 1.55
PRKN-202ENST00000366892 WAPLQ7Z5K2 1190 aa24.75■■□□□ 1.55
PRKN-202ENST00000366892 NRXN1Q9ULB1 1477 aa24.75■■□□□ 1.55
PRKN-202ENST00000366892 COL16A1Q07092 1604 aaPredicted RBP24.74■■□□□ 1.55
PRKN-202ENST00000366892 AHDC1Q5TGY3 1603 aaPredicted RBP24.74■■□□□ 1.55
PRKN-202ENST00000366892 TECPR2O15040 1411 aa24.73■■□□□ 1.55
PRKN-202ENST00000366892 MYOM2P54296 1465 aa24.73■■□□□ 1.55
PRKN-202ENST00000366892 RGS17Q9UGC6 210 aaPredicted RBP24.73■■□□□ 1.55
PRKN-202ENST00000366892 ASXL1Q8IXJ9 1541 aa24.72■■□□□ 1.55
PRKN-202ENST00000366892 C1orf167Q5SNV9 1468 aa24.72■■□□□ 1.55
PRKN-202ENST00000366892 YTHDC2Q9H6S0 1430 aaKnown RBP24.71■■□□□ 1.55
PRKN-202ENST00000366892 DCAF11Q8TEB1 546 aa24.7■■□□□ 1.54
PRKN-202ENST00000366892 DDX17Q92841 729 aaKnown RBP24.7■■□□□ 1.54
PRKN-202ENST00000366892 ORAI2Q96SN7 254 aa24.69■■□□□ 1.54
PRKN-202ENST00000366892 KDM2AQ9Y2K7 1162 aa24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms