RNA–Protein interactions for RNA: ENST00000366595.7

NID1-202, Transcript of nidogen 1, humanhuman

TSL 1 (best) BASIC

Gene NID1, Length 5,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-202ENST00000366595 TRDNQ13061 729 aa20.31■□□□□ 0.84
NID1-202ENST00000366595 SMC3Q9UQE7 1217 aa20.3■□□□□ 0.84
NID1-202ENST00000366595 ANO2Q9NQ90 1003 aa20.3■□□□□ 0.84
NID1-202ENST00000366595 ANKRD30AQ9BXX3 1397 aa20.3■□□□□ 0.84
NID1-202ENST00000366595 NAP1L1P55209 391 aaKnown RBP20.3■□□□□ 0.84
NID1-202ENST00000366595 FOXD4L6Q3SYB3 417 aaPredicted RBP20.3■□□□□ 0.84
NID1-202ENST00000366595 FOXD4L3Q6VB84 417 aaPredicted RBP20.3■□□□□ 0.84
NID1-202ENST00000366595 SAFBQ15424 915 aaKnown RBP eCLIP20.29■□□□□ 0.84
NID1-202ENST00000366595 ODF2Q5BJF6 829 aa20.29■□□□□ 0.84
NID1-202ENST00000366595 SLC4A3P48751 1232 aa20.29■□□□□ 0.84
NID1-202ENST00000366595 AMPHP49418 695 aa20.29■□□□□ 0.84
NID1-202ENST00000366595 LEKR1Q6ZMV7 388 aa20.29■□□□□ 0.84
NID1-202ENST00000366595 FMN1Q68DA7 1419 aa20.28■□□□□ 0.84
NID1-202ENST00000366595 OLFM4Q6UX06 510 aa20.28■□□□□ 0.84
NID1-202ENST00000366595 ZBED9Q6R2W3 1325 aa20.28■□□□□ 0.84
NID1-202ENST00000366595 WWC1Q8IX03 1113 aa20.28■□□□□ 0.84
NID1-202ENST00000366595 NUP155O75694 1391 aa20.28■□□□□ 0.84
NID1-202ENST00000366595 NEXNQ0ZGT2 675 aa20.27■□□□□ 0.84
NID1-202ENST00000366595 INTS3Q68E01 1043 aaKnown RBP20.27■□□□□ 0.84
NID1-202ENST00000366595 ZRSR2Q15696 482 aaKnown RBP20.27■□□□□ 0.83
NID1-202ENST00000366595 API5Q9BZZ5 524 aaKnown RBP20.27■□□□□ 0.83
NID1-202ENST00000366595 VPS8Q8N3P4 1428 aa20.26■□□□□ 0.83
NID1-202ENST00000366595 R3HCC1Q9Y3T6 440 aaKnown RBP20.26■□□□□ 0.83
NID1-202ENST00000366595 CAGE1Q8TC20 777 aa20.26■□□□□ 0.83
NID1-202ENST00000366595 GGT6Q6P531 493 aa20.25■□□□□ 0.83
NID1-202ENST00000366595 NASPP49321 788 aaPredicted RBP20.25■□□□□ 0.83
NID1-202ENST00000366595 CTDP1Q9Y5B0 961 aaPredicted RBP20.25■□□□□ 0.83
NID1-202ENST00000366595 OFD1O75665 1012 aa20.24■□□□□ 0.83
NID1-202ENST00000366595 RAB3GAP2Q9H2M9 1393 aa20.24■□□□□ 0.83
NID1-202ENST00000366595 VPS37CA5D8V6 355 aaPredicted RBP20.24■□□□□ 0.83
NID1-202ENST00000366595 IFIT2P09913 472 aaKnown RBP20.24■□□□□ 0.83
NID1-202ENST00000366595 ERICH2A1L162 156 aa20.24■□□□□ 0.83
NID1-202ENST00000366595 HSP90AB4PQ58FF6 505 aa20.24■□□□□ 0.83
NID1-202ENST00000366595 GOLGA6L7A0A1B0GV03 622 aa20.23■□□□□ 0.83
NID1-202ENST00000366595 MBD3O95983 291 aa20.23■□□□□ 0.83
NID1-202ENST00000366595 CCDC43Q96MW1 224 aaKnown RBP20.23■□□□□ 0.83
NID1-202ENST00000366595 TRIM34Q9BYJ4 488 aa20.23■□□□□ 0.83
NID1-202ENST00000366595 TSPYL1Q9H0U9 437 aa20.23■□□□□ 0.83
NID1-202ENST00000366595 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.23■□□□□ 0.83
NID1-202ENST00000366595 EXOC6Q8TAG9 804 aa20.22■□□□□ 0.83
NID1-202ENST00000366595 CRBNQ96SW2 442 aa20.22■□□□□ 0.83
NID1-202ENST00000366595 USP8P40818 1118 aa20.21■□□□□ 0.83
NID1-202ENST00000366595 MLECQ14165 292 aa20.21■□□□□ 0.83
NID1-202ENST00000366595 HSP90AB2PQ58FF8 381 aa20.21■□□□□ 0.83
NID1-202ENST00000366595 NGDNQ8NEJ9 315 aaKnown RBP20.21■□□□□ 0.83
NID1-202ENST00000366595 SMARCE1Q969G3 411 aa20.2■□□□□ 0.83
NID1-202ENST00000366595 CARMIL1Q5VZK9 1371 aa20.2■□□□□ 0.82
NID1-202ENST00000366595 BAZ1BQ9UIG0 1483 aaKnown RBP20.2■□□□□ 0.82
NID1-202ENST00000366595 FBXO3Q9UK99 471 aa20.2■□□□□ 0.82
NID1-202ENST00000366595 KRI1Q8N9T8 703 aaKnown RBP20.19■□□□□ 0.82
NID1-202ENST00000366595 KIF7Q2M1P5 1343 aa20.19■□□□□ 0.82
NID1-202ENST00000366595 PIP4K2AP48426 406 aaPredicted RBP20.19■□□□□ 0.82
NID1-202ENST00000366595 ANO8Q9HCE9 1232 aaPredicted RBP20.19■□□□□ 0.82
NID1-202ENST00000366595 BRMS1Q9HCU9 246 aa20.19■□□□□ 0.82
NID1-202ENST00000366595 ERC2O15083 957 aa20.19■□□□□ 0.82
NID1-202ENST00000366595 NFXL1Q6ZNB6 911 aa20.19■□□□□ 0.82
NID1-202ENST00000366595 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.18■□□□□ 0.82
NID1-202ENST00000366595 EPS15P42566 896 aa20.18■□□□□ 0.82
NID1-202ENST00000366595 C9orf78Q9NZ63 289 aaPredicted RBP20.18■□□□□ 0.82
NID1-202ENST00000366595 COG6Q9Y2V7 657 aa20.18■□□□□ 0.82
NID1-202ENST00000366595 KIAA0754O94854 1291 aa20.17■□□□□ 0.82
NID1-202ENST00000366595 ERLIN2O94905 339 aa20.17■□□□□ 0.82
NID1-202ENST00000366595 C1orf141Q5JVX7 400 aa20.17■□□□□ 0.82
NID1-202ENST00000366595 CAVIN1Q6NZI2 390 aaKnown RBP20.17■□□□□ 0.82
NID1-202ENST00000366595 DZIP1LQ8IYY4 767 aaKnown RBP20.17■□□□□ 0.82
NID1-202ENST00000366595 XBP1P17861 261 aa20.17■□□□□ 0.82
NID1-202ENST00000366595 PKNOX2Q96KN3 472 aa20.17■□□□□ 0.82
NID1-202ENST00000366595 DHX16O60231 1041 aaKnown RBP20.16■□□□□ 0.82
NID1-202ENST00000366595 FILIP1LQ4L180 1135 aa20.16■□□□□ 0.82
NID1-202ENST00000366595 EFCAB2Q5VUJ9 269 aa20.16■□□□□ 0.82
NID1-202ENST00000366595 DDX58O95786 925 aaKnown RBP20.16■□□□□ 0.82
NID1-202ENST00000366595 L3MBTL2Q969R5 705 aa20.16■□□□□ 0.82
NID1-202ENST00000366595 SDF4Q9BRK5 362 aa20.16■□□□□ 0.82
NID1-202ENST00000366595 C22orf23Q9BZE7 217 aa20.16■□□□□ 0.82
NID1-202ENST00000366595 FOXD1Q16676 465 aa20.15■□□□□ 0.82
NID1-202ENST00000366595 RSPH4AQ5TD94 716 aa20.15■□□□□ 0.82
NID1-202ENST00000366595 NFKBIBQ15653 356 aa20.15■□□□□ 0.82
NID1-202ENST00000366595 ANKRD18AQ8IVF6 992 aa20.15■□□□□ 0.82
NID1-202ENST00000366595 PDILTQ8N807 584 aa20.15■□□□□ 0.82
NID1-202ENST00000366595 INCENPQ9NQS7 918 aa20.15■□□□□ 0.82
NID1-202ENST00000366595 G3BP1Q13283 466 aaKnown RBP eCLIP20.15■□□□□ 0.82
NID1-202ENST00000366595 AXDND1Q5T1B0 1012 aaPredicted RBP20.15■□□□□ 0.82
NID1-202ENST00000366595 EID1Q9Y6B2 187 aa20.14■□□□□ 0.82
NID1-202ENST00000366595 TEFQ10587 303 aa20.14■□□□□ 0.81
NID1-202ENST00000366595 CCDC9Q9Y3X0 531 aaKnown RBP20.14■□□□□ 0.81
NID1-202ENST00000366595 CNKSR2Q8WXI2 1034 aa20.14■□□□□ 0.81
NID1-202ENST00000366595 CT47B1P0C2W7 299 aaPredicted RBP20.14■□□□□ 0.81
NID1-202ENST00000366595 PSMA5P28066 241 aa20.14■□□□□ 0.81
NID1-202ENST00000366595 TXLNBQ8N3L3 684 aa20.14■□□□□ 0.81
NID1-202ENST00000366595 GOLGA6L10A6NI86 522 aa20.13■□□□□ 0.81
NID1-202ENST00000366595 TRIM5Q9C035 493 aa20.13■□□□□ 0.81
NID1-202ENST00000366595 RALYLQ86SE5 291 aaKnown RBP20.13■□□□□ 0.81
NID1-202ENST00000366595 MCM2P49736 904 aa20.13■□□□□ 0.81
NID1-202ENST00000366595 HSP90AB3PQ58FF7 597 aa20.12■□□□□ 0.81
NID1-202ENST00000366595 CARMIL2Q6F5E8 1435 aa20.12■□□□□ 0.81
NID1-202ENST00000366595 EIF4G1Q04637 1599 aaKnown RBP20.12■□□□□ 0.81
NID1-202ENST00000366595 EIF3JO75822 258 aaKnown RBP20.12■□□□□ 0.81
NID1-202ENST00000366595 RRP7AQ9Y3A4 280 aaKnown RBP20.12■□□□□ 0.81
NID1-202ENST00000366595 ERLIN1O75477 346 aa20.12■□□□□ 0.81
NID1-202ENST00000366595 CDC45O75419 566 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms