RNA–Protein interactions for RNA: ENST00000364700.1

RNU4-56P-201, Transcript of RNA, U4 small nuclear 56, pseudogene, humanhuman

BASIC

Gene RNU4-56P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-56P-201ENST00000364700 COPS2P61201 443 aa5.82□□□□□ -1.48
RNU4-56P-201ENST00000364700 ARHGEF1Q92888 912 aaKnown RBP5.8□□□□□ -1.48
RNU4-56P-201ENST00000364700 PCDHB3Q9Y5E6 796 aa5.8□□□□□ -1.48
RNU4-56P-201ENST00000364700 DNAJB2P25686 324 aa5.79□□□□□ -1.48
RNU4-56P-201ENST00000364700 RNF223E7ERA6 249 aa5.78□□□□□ -1.48
RNU4-56P-201ENST00000364700 PTGDRQ13258 359 aa5.78□□□□□ -1.48
RNU4-56P-201ENST00000364700 BLOC1S3Q6QNY0 202 aa5.78□□□□□ -1.48
RNU4-56P-201ENST00000364700 RBM46Q8TBY0 533 aaKnown RBP5.78□□□□□ -1.48
RNU4-56P-201ENST00000364700 TMEM134Q9H6X4 195 aa5.78□□□□□ -1.48
RNU4-56P-201ENST00000364700 SLC19A1P41440 591 aa5.77□□□□□ -1.49
RNU4-56P-201ENST00000364700 KMT5BQ4FZB7 885 aa5.77□□□□□ -1.49
RNU4-56P-201ENST00000364700 ZNF787Q6DD87 383 aa5.77□□□□□ -1.49
RNU4-56P-201ENST00000364700 KCNV2Q8TDN2 545 aa5.77□□□□□ -1.49
RNU4-56P-201ENST00000364700 ADGRG1Q9Y653 693 aa5.77□□□□□ -1.49
RNU4-56P-201ENST00000364700 ACTN4O43707 911 aaKnown RBP5.76□□□□□ -1.49
RNU4-56P-201ENST00000364700 MLLT3P42568 568 aaPredicted RBP5.76□□□□□ -1.49
RNU4-56P-201ENST00000364700 TRIM67Q6ZTA4 783 aa5.76□□□□□ -1.49
RNU4-56P-201ENST00000364700 ANKLE1Q8NAG6 615 aa5.76□□□□□ -1.49
RNU4-56P-201ENST00000364700 PRKCSHP14314 528 aaPredicted RBP5.75□□□□□ -1.49
RNU4-56P-201ENST00000364700 PRR20EP86478 221 aa5.75□□□□□ -1.49
RNU4-56P-201ENST00000364700 PRR20CP86479 221 aa5.75□□□□□ -1.49
RNU4-56P-201ENST00000364700 PRR20DP86480 221 aa5.75□□□□□ -1.49
RNU4-56P-201ENST00000364700 PRR20BP86481 221 aa5.75□□□□□ -1.49
RNU4-56P-201ENST00000364700 PRR20AP86496 221 aa5.75□□□□□ -1.49
RNU4-56P-201ENST00000364700 SPRYD7Q5W111 196 aa5.75□□□□□ -1.49
RNU4-56P-201ENST00000364700 ZNF598Q86UK7 904 aaKnown RBP5.75□□□□□ -1.49
RNU4-56P-201ENST00000364700 RCCD1A6NED2 376 aa5.74□□□□□ -1.49
RNU4-56P-201ENST00000364700 DGAT1O75907 488 aa5.74□□□□□ -1.49
RNU4-56P-201ENST00000364700 EMID1Q96A84 441 aaPredicted RBP5.74□□□□□ -1.49
RNU4-56P-201ENST00000364700 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.73□□□□□ -1.49
RNU4-56P-201ENST00000364700 NR1I2O75469 434 aa5.73□□□□□ -1.49
RNU4-56P-201ENST00000364700 ADH1BP00325 375 aa5.73□□□□□ -1.49
RNU4-56P-201ENST00000364700 CFHP08603 1231 aa5.73□□□□□ -1.49
RNU4-56P-201ENST00000364700 PKDCCQ504Y2 493 aa5.73□□□□□ -1.49
RNU4-56P-201ENST00000364700 NUTM2FA1L443 756 aa5.72□□□□□ -1.49
RNU4-56P-201ENST00000364700 TLL1O43897 1013 aa5.72□□□□□ -1.49
RNU4-56P-201ENST00000364700 FCHSD2O94868 740 aa5.71□□□□□ -1.5
RNU4-56P-201ENST00000364700 S1PR4O95977 384 aa5.71□□□□□ -1.5
RNU4-56P-201ENST00000364700 OATP04181 439 aa5.71□□□□□ -1.5
RNU4-56P-201ENST00000364700 MYT1Q01538 1121 aa5.71□□□□□ -1.5
RNU4-56P-201ENST00000364700 ZNF775Q96BV0 537 aaPredicted RBP5.71□□□□□ -1.5
RNU4-56P-201ENST00000364700 SLC10A3P09131 477 aa5.7□□□□□ -1.5
RNU4-56P-201ENST00000364700 RSPH4AQ5TD94 716 aa5.7□□□□□ -1.5
RNU4-56P-201ENST00000364700 ZNF697Q5TEC3 545 aa5.7□□□□□ -1.5
RNU4-56P-201ENST00000364700 LIAT1Q6ZQX7 453 aa5.7□□□□□ -1.5
RNU4-56P-201ENST00000364700 P3H3Q8IVL6 736 aa5.7□□□□□ -1.5
RNU4-56P-201ENST00000364700 GDF9O60383 454 aa5.69□□□□□ -1.5
RNU4-56P-201ENST00000364700 LMOD2Q6P5Q4 547 aa5.69□□□□□ -1.5
RNU4-56P-201ENST00000364700 SLC6A16Q9GZN6 736 aa5.69□□□□□ -1.5
RNU4-56P-201ENST00000364700 PPEF1O14829 653 aaPredicted RBP5.68□□□□□ -1.5
RNU4-56P-201ENST00000364700 FAM161AQ3B820 660 aa5.68□□□□□ -1.5
RNU4-56P-201ENST00000364700 SCUBE3Q8IX30 993 aa5.68□□□□□ -1.5
RNU4-56P-201ENST00000364700 PXYLP1Q8TE99 480 aa5.68□□□□□ -1.5
RNU4-56P-201ENST00000364700 TPRNQ4KMQ1 711 aa5.67□□□□□ -1.5
RNU4-56P-201ENST00000364700 FAM187AA6NFU0 413 aa5.66□□□□□ -1.5
RNU4-56P-201ENST00000364700 HIC1Q14526 733 aa5.66□□□□□ -1.5
RNU4-56P-201ENST00000364700 METTL3Q86U44 580 aaKnown RBP5.66□□□□□ -1.5
RNU4-56P-201ENST00000364700 SPSB2Q99619 263 aa5.66□□□□□ -1.5
RNU4-56P-201ENST00000364700 TNFRSF10AO00220 468 aa5.65□□□□□ -1.5
RNU4-56P-201ENST00000364700 RPIAP49247 311 aa5.65□□□□□ -1.5
RNU4-56P-201ENST00000364700 PLA2G2CQ5R387 149 aa5.65□□□□□ -1.5
RNU4-56P-201ENST00000364700 TESPA1A2RU30 521 aaPredicted RBP5.64□□□□□ -1.51
RNU4-56P-201ENST00000364700 POTECB2RU33 542 aa5.64□□□□□ -1.51
RNU4-56P-201ENST00000364700 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.64□□□□□ -1.51
RNU4-56P-201ENST00000364700 SEMA3EO15041 775 aa5.63□□□□□ -1.51
RNU4-56P-201ENST00000364700 CRIPAKQ8N1N5 446 aa5.63□□□□□ -1.51
RNU4-56P-201ENST00000364700 AAASQ9NRG9 546 aa5.63□□□□□ -1.51
RNU4-56P-201ENST00000364700 PKD2L1Q9P0L9 805 aa5.63□□□□□ -1.51
RNU4-56P-201ENST00000364700 CD2BP2O95400 341 aaKnown RBP5.62□□□□□ -1.51
RNU4-56P-201ENST00000364700 PUS10Q3MIT2 529 aaKnown RBP5.62□□□□□ -1.51
RNU4-56P-201ENST00000364700 MORN1Q5T089 497 aa5.62□□□□□ -1.51
RNU4-56P-201ENST00000364700 DAXXQ9UER7 740 aaPredicted RBP5.62□□□□□ -1.51
RNU4-56P-201ENST00000364700 SALL2Q9Y467 1007 aaPredicted RBP5.62□□□□□ -1.51
RNU4-56P-201ENST00000364700 AVPP01185 164 aa5.61□□□□□ -1.51
RNU4-56P-201ENST00000364700 ATP6V1AP38606 617 aa5.61□□□□□ -1.51
RNU4-56P-201ENST00000364700 SMYD5Q6GMV2 418 aa5.61□□□□□ -1.51
RNU4-56P-201ENST00000364700 TREML4Q6UXN2 200 aa5.61□□□□□ -1.51
RNU4-56P-201ENST00000364700 THAP11Q96EK4 314 aa5.61□□□□□ -1.51
RNU4-56P-201ENST00000364700 GNPATO15228 680 aa5.6□□□□□ -1.51
RNU4-56P-201ENST00000364700 ST8SIA5O15466 376 aa5.6□□□□□ -1.51
RNU4-56P-201ENST00000364700 FMNL1O95466 1100 aaPredicted RBP5.6□□□□□ -1.51
RNU4-56P-201ENST00000364700 FOXC1Q12948 553 aa5.6□□□□□ -1.51
RNU4-56P-201ENST00000364700 CTC1Q2NKJ3 1217 aa5.6□□□□□ -1.51
RNU4-56P-201ENST00000364700 SULF1Q8IWU6 871 aa5.6□□□□□ -1.51
RNU4-56P-201ENST00000364700 RDH13Q8NBN7 331 aa5.6□□□□□ -1.51
RNU4-56P-201ENST00000364700 TOR4AQ9NXH8 423 aa5.6□□□□□ -1.51
RNU4-56P-201ENST00000364700 GCGRP47871 477 aa5.59□□□□□ -1.51
RNU4-56P-201ENST00000364700 FUT2Q10981 343 aa5.59□□□□□ -1.51
RNU4-56P-201ENST00000364700 LCE2AQ5TA79 106 aaPredicted RBP5.59□□□□□ -1.51
RNU4-56P-201ENST00000364700 FAM160A2Q8N612 972 aaPredicted RBP5.59□□□□□ -1.51
RNU4-56P-201ENST00000364700 FCF1Q9Y324 198 aaKnown RBP5.59□□□□□ -1.51
RNU4-56P-201ENST00000364700 DDX11L8A8MPP1 907 aa5.58□□□□□ -1.52
RNU4-56P-201ENST00000364700 GPR37O15354 613 aa5.58□□□□□ -1.52
RNU4-56P-201ENST00000364700 SMCPP49901 116 aaPredicted RBP5.58□□□□□ -1.52
RNU4-56P-201ENST00000364700 RBM26Q5T8P6 1007 aaKnown RBP5.58□□□□□ -1.52
RNU4-56P-201ENST00000364700 CYP4X1Q8N118 509 aa5.58□□□□□ -1.52
RNU4-56P-201ENST00000364700 SLC27A5Q9Y2P5 690 aa5.58□□□□□ -1.52
RNU4-56P-201ENST00000364700 FECHP22830 423 aa5.57□□□□□ -1.52
RNU4-56P-201ENST00000364700 GRIPAP1Q4V328 841 aa5.57□□□□□ -1.52
RNU4-56P-201ENST00000364700 MSS51Q4VC12 460 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms