RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 SAMD7Q7Z3H4 446 aa10.3□□□□□ -0.76
RNU4-4P-201ENST00000364588 PTPN5P54829 565 aa10.29□□□□□ -0.76
RNU4-4P-201ENST00000364588 MAP2K5Q13163 448 aa10.29□□□□□ -0.76
RNU4-4P-201ENST00000364588 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.28□□□□□ -0.76
RNU4-4P-201ENST00000364588 TSR3Q9UJK0 312 aaKnown RBP10.28□□□□□ -0.76
RNU4-4P-201ENST00000364588 METTL3Q86U44 580 aaKnown RBP10.27□□□□□ -0.77
RNU4-4P-201ENST00000364588 SLF2Q8IX21 1173 aa10.27□□□□□ -0.77
RNU4-4P-201ENST00000364588 PXYLP1Q8TE99 480 aa10.27□□□□□ -0.77
RNU4-4P-201ENST00000364588 HPS5Q9UPZ3 1129 aa10.27□□□□□ -0.77
RNU4-4P-201ENST00000364588 RNF40O75150 1001 aa10.26□□□□□ -0.77
RNU4-4P-201ENST00000364588 FECHP22830 423 aa10.26□□□□□ -0.77
RNU4-4P-201ENST00000364588 TMEM134Q9H6X4 195 aa10.26□□□□□ -0.77
RNU4-4P-201ENST00000364588 RCCD1A6NED2 376 aa10.25□□□□□ -0.77
RNU4-4P-201ENST00000364588 FAM161AQ3B820 660 aa10.25□□□□□ -0.77
RNU4-4P-201ENST00000364588 SWT1Q5T5J6 900 aaKnown RBP10.25□□□□□ -0.77
RNU4-4P-201ENST00000364588 PPP4CP60510 307 aa10.23□□□□□ -0.77
RNU4-4P-201ENST00000364588 MINK1Q8N4C8 1332 aaPredicted RBP10.23□□□□□ -0.77
RNU4-4P-201ENST00000364588 WBP1LQ9NX94 342 aa10.22□□□□□ -0.77
RNU4-4P-201ENST00000364588 ZC3H15Q8WU90 426 aaKnown RBP10.21□□□□□ -0.77
RNU4-4P-201ENST00000364588 PRR14Q9BWN1 585 aa10.2□□□□□ -0.78
RNU4-4P-201ENST00000364588 IRF6O14896 467 aa10.19□□□□□ -0.78
RNU4-4P-201ENST00000364588 CCDC102AQ96A19 550 aa10.19□□□□□ -0.78
RNU4-4P-201ENST00000364588 ZMYND10O75800 440 aa10.18□□□□□ -0.78
RNU4-4P-201ENST00000364588 BARGINQ6ZT62 677 aa10.18□□□□□ -0.78
RNU4-4P-201ENST00000364588 RSPH4AQ5TD94 716 aa10.16□□□□□ -0.78
RNU4-4P-201ENST00000364588 KRI1Q8N9T8 703 aaKnown RBP10.16□□□□□ -0.78
RNU4-4P-201ENST00000364588 SULF1Q8IWU6 871 aa10.15□□□□□ -0.78
RNU4-4P-201ENST00000364588 PLA2G2EQ9NZK7 142 aa10.15□□□□□ -0.78
RNU4-4P-201ENST00000364588 DAXXQ9UER7 740 aaPredicted RBP10.15□□□□□ -0.78
RNU4-4P-201ENST00000364588 KMT5BQ4FZB7 885 aa10.13□□□□□ -0.79
RNU4-4P-201ENST00000364588 ITGBL1O95965 494 aaPredicted RBP10.12□□□□□ -0.79
RNU4-4P-201ENST00000364588 PHOX2BQ99453 314 aa10.12□□□□□ -0.79
RNU4-4P-201ENST00000364588 CFHP08603 1231 aa10.11□□□□□ -0.79
RNU4-4P-201ENST00000364588 IFFO2Q5TF58 517 aa10.11□□□□□ -0.79
RNU4-4P-201ENST00000364588 NCAPD3P42695 1498 aa10.1□□□□□ -0.79
RNU4-4P-201ENST00000364588 CLCN1P35523 988 aa10.1□□□□□ -0.79
RNU4-4P-201ENST00000364588 APLP1P51693 650 aa10.1□□□□□ -0.79
RNU4-4P-201ENST00000364588 RDH13Q8NBN7 331 aa10.09□□□□□ -0.79
RNU4-4P-201ENST00000364588 NLRP7Q8WX94 980 aa10.09□□□□□ -0.79
RNU4-4P-201ENST00000364588 ATAD2BQ9ULI0 1458 aa10.09□□□□□ -0.79
RNU4-4P-201ENST00000364588 SMARCA4P51532 1647 aa10.08□□□□□ -0.8
RNU4-4P-201ENST00000364588 DDX11L8A8MPP1 907 aa10.08□□□□□ -0.8
RNU4-4P-201ENST00000364588 MDM2Q00987 491 aaPredicted RBP10.08□□□□□ -0.8
RNU4-4P-201ENST00000364588 GPCPD1Q9NPB8 672 aa10.08□□□□□ -0.8
RNU4-4P-201ENST00000364588 ERCC6Q03468 1493 aa10.07□□□□□ -0.8
RNU4-4P-201ENST00000364588 SLC10A3P09131 477 aa10.07□□□□□ -0.8
RNU4-4P-201ENST00000364588 KCNC4Q03721 635 aa10.07□□□□□ -0.8
RNU4-4P-201ENST00000364588 ACTN4O43707 911 aaKnown RBP10.06□□□□□ -0.8
RNU4-4P-201ENST00000364588 AMHR2Q16671 573 aa10.06□□□□□ -0.8
RNU4-4P-201ENST00000364588 AK7Q96M32 723 aa10.06□□□□□ -0.8
RNU4-4P-201ENST00000364588 IL21Q9HBE4 155 aa10.06□□□□□ -0.8
RNU4-4P-201ENST00000364588 PCDHB3Q9Y5E6 796 aa10.06□□□□□ -0.8
RNU4-4P-201ENST00000364588 TTLL12Q14166 644 aaPredicted RBP10.05□□□□□ -0.8
RNU4-4P-201ENST00000364588 MTRQ99707 1265 aa10.05□□□□□ -0.8
RNU4-4P-201ENST00000364588 SMARCA2P51531 1590 aa10.05□□□□□ -0.8
RNU4-4P-201ENST00000364588 CUX2O14529 1486 aa10.04□□□□□ -0.8
RNU4-4P-201ENST00000364588 HMGXB3Q12766 1538 aa10.03□□□□□ -0.8
RNU4-4P-201ENST00000364588 TJAP1Q5JTD0 557 aa10.02□□□□□ -0.81
RNU4-4P-201ENST00000364588 NESP48681 1621 aa10.01□□□□□ -0.81
RNU4-4P-201ENST00000364588 CD46P15529 392 aa10.01□□□□□ -0.81
RNU4-4P-201ENST00000364588 BAZ1AQ9NRL2 1556 aaPredicted RBP10.01□□□□□ -0.81
RNU4-4P-201ENST00000364588 BAZ1BQ9UIG0 1483 aaKnown RBP10□□□□□ -0.81
RNU4-4P-201ENST00000364588 TRIM66O15016 1216 aa10□□□□□ -0.81
RNU4-4P-201ENST00000364588 GCGRP47871 477 aa10□□□□□ -0.81
RNU4-4P-201ENST00000364588 COPS2P61201 443 aa10□□□□□ -0.81
RNU4-4P-201ENST00000364588 TMUB1Q9BVT8 246 aa10□□□□□ -0.81
RNU4-4P-201ENST00000364588 FAM217BQ9NTX9 383 aaPredicted RBP10□□□□□ -0.81
RNU4-4P-201ENST00000364588 A0A0G2JS52 829 aa9.99□□□□□ -0.81
RNU4-4P-201ENST00000364588 NR1I2O75469 434 aa9.99□□□□□ -0.81
RNU4-4P-201ENST00000364588 BLOC1S3Q6QNY0 202 aa9.99□□□□□ -0.81
RNU4-4P-201ENST00000364588 SLC24A3Q9HC58 644 aa9.99□□□□□ -0.81
RNU4-4P-201ENST00000364588 GRIPAP1Q4V328 841 aa9.98□□□□□ -0.81
RNU4-4P-201ENST00000364588 GIGYF2Q6Y7W6 1299 aaKnown RBP9.97□□□□□ -0.81
RNU4-4P-201ENST00000364588 ZPR1O75312 459 aa9.96□□□□□ -0.82
RNU4-4P-201ENST00000364588 USP46P62068 366 aa9.96□□□□□ -0.82
RNU4-4P-201ENST00000364588 FUT2Q10981 343 aa9.96□□□□□ -0.82
RNU4-4P-201ENST00000364588 PARP9Q8IXQ6 854 aa9.96□□□□□ -0.82
RNU4-4P-201ENST00000364588 ATP6V1AP38606 617 aa9.95□□□□□ -0.82
RNU4-4P-201ENST00000364588 MROH2BQ7Z745 1585 aa9.95□□□□□ -0.82
RNU4-4P-201ENST00000364588 PEG3Q9GZU2 1588 aa9.95□□□□□ -0.82
RNU4-4P-201ENST00000364588 KDM4AO75164 1064 aa9.94□□□□□ -0.82
RNU4-4P-201ENST00000364588 PDE4DQ08499 809 aa9.94□□□□□ -0.82
RNU4-4P-201ENST00000364588 SSTR3P32745 418 aaPredicted RBP9.93□□□□□ -0.82
RNU4-4P-201ENST00000364588 ZNF516Q92618 1163 aa9.93□□□□□ -0.82
RNU4-4P-201ENST00000364588 REPIN1Q9BWE0 567 aaKnown RBP9.93□□□□□ -0.82
RNU4-4P-201ENST00000364588 GGCXP38435 758 aa9.92□□□□□ -0.82
RNU4-4P-201ENST00000364588 PUS10Q3MIT2 529 aaKnown RBP9.91□□□□□ -0.82
RNU4-4P-201ENST00000364588 MORN1Q5T089 497 aa9.91□□□□□ -0.82
RNU4-4P-201ENST00000364588 NUTM1Q86Y26 1132 aa9.91□□□□□ -0.82
RNU4-4P-201ENST00000364588 THOC2Q8NI27 1593 aaKnown RBP9.9□□□□□ -0.82
RNU4-4P-201ENST00000364588 LAMC3Q9Y6N6 1575 aa9.9□□□□□ -0.82
RNU4-4P-201ENST00000364588 TLL1O43897 1013 aa9.9□□□□□ -0.82
RNU4-4P-201ENST00000364588 RGS20O76081 388 aa9.9□□□□□ -0.82
RNU4-4P-201ENST00000364588 ADH1BP00325 375 aa9.9□□□□□ -0.82
RNU4-4P-201ENST00000364588 KIF21AQ7Z4S6 1674 aa9.9□□□□□ -0.83
RNU4-4P-201ENST00000364588 HOXA2O43364 376 aa9.89□□□□□ -0.83
RNU4-4P-201ENST00000364588 DIXDC1Q155Q3 683 aa9.89□□□□□ -0.83
RNU4-4P-201ENST00000364588 Q3C1V9 767 aa9.88□□□□□ -0.83
RNU4-4P-201ENST00000364588 SCUBE3Q8IX30 993 aa9.88□□□□□ -0.83
RNU4-4P-201ENST00000364588 BEGAINQ9BUH8 593 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms