RNA–Protein interactions for RNA: ENST00000360876.8

EIF3B-201, Transcript of eukaryotic translation initiation factor 3 subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EIF3B, Length 3,055 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3B-201ENST00000360876 SEC24BO95487 1268 aa23.44■■□□□ 1.34
EIF3B-201ENST00000360876 BLMP54132 1417 aaPredicted RBP23.44■■□□□ 1.34
EIF3B-201ENST00000360876 KDM2BQ8NHM5 1336 aa23.44■■□□□ 1.34
EIF3B-201ENST00000360876 KIF3BO15066 747 aa23.44■■□□□ 1.34
EIF3B-201ENST00000360876 SAFB2Q14151 953 aaKnown RBP eCLIP23.43■■□□□ 1.34
EIF3B-201ENST00000360876 TTC37Q6PGP7 1564 aa23.43■■□□□ 1.34
EIF3B-201ENST00000360876 SLKQ9H2G2 1235 aaPredicted RBP23.43■■□□□ 1.34
EIF3B-201ENST00000360876 CDC42BPBQ9Y5S2 1711 aa23.43■■□□□ 1.34
EIF3B-201ENST00000360876 SLFN5Q08AF3 891 aa23.41■■□□□ 1.34
EIF3B-201ENST00000360876 CARD14Q9BXL6 1004 aa23.41■■□□□ 1.34
EIF3B-201ENST00000360876 ERCC6L2Q5T890 1561 aa23.41■■□□□ 1.34
EIF3B-201ENST00000360876 TRAPPC8Q9Y2L5 1435 aa23.4■■□□□ 1.34
EIF3B-201ENST00000360876 GPRASP1Q5JY77 1395 aa23.4■■□□□ 1.34
EIF3B-201ENST00000360876 CENPQQ7L2Z9 268 aaPredicted RBP23.4■■□□□ 1.34
EIF3B-201ENST00000360876 TRAK1Q9UPV9 953 aa23.4■■□□□ 1.34
EIF3B-201ENST00000360876 FAM161AQ3B820 660 aa23.39■■□□□ 1.34
EIF3B-201ENST00000360876 WDR7Q9Y4E6 1490 aa23.39■■□□□ 1.33
EIF3B-201ENST00000360876 PPM1GO15355 546 aaPredicted RBP23.39■■□□□ 1.33
EIF3B-201ENST00000360876 TMEM132EQ6IEE7 984 aa23.39■■□□□ 1.33
EIF3B-201ENST00000360876 ADGRF5Q8IZF2 1346 aa23.38■■□□□ 1.33
EIF3B-201ENST00000360876 SPAG9O60271 1321 aaKnown RBP23.38■■□□□ 1.33
EIF3B-201ENST00000360876 ZMYM4Q5VZL5 1548 aa23.35■■□□□ 1.33
EIF3B-201ENST00000360876 RSPH4AQ5TD94 716 aa23.35■■□□□ 1.33
EIF3B-201ENST00000360876 EFCAB2Q5VUJ9 269 aa23.35■■□□□ 1.33
EIF3B-201ENST00000360876 DDRGK1Q96HY6 314 aa23.35■■□□□ 1.33
EIF3B-201ENST00000360876 SLC12A5Q9H2X9 1139 aa23.35■■□□□ 1.33
EIF3B-201ENST00000360876 PRDM15P57071 1507 aaPredicted RBP23.34■■□□□ 1.33
EIF3B-201ENST00000360876 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.33■■□□□ 1.332e-6■■□□□ 13
EIF3B-201ENST00000360876 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.33■■□□□ 1.33
EIF3B-201ENST00000360876 ZNF521Q96K83 1311 aa23.32■■□□□ 1.32
EIF3B-201ENST00000360876 GSE1Q14687 1217 aa23.32■■□□□ 1.32
EIF3B-201ENST00000360876 WASHC2CQ9Y4E1 1318 aa23.31■■□□□ 1.32
EIF3B-201ENST00000360876 UGGT1Q9NYU2 1555 aa23.3■■□□□ 1.32
EIF3B-201ENST00000360876 ARHGEF5Q12774 1597 aa23.29■■□□□ 1.32
EIF3B-201ENST00000360876 MYO5CQ9NQX4 1742 aa23.29■■□□□ 1.32
EIF3B-201ENST00000360876 RLBP1P12271 317 aa23.29■■□□□ 1.32
EIF3B-201ENST00000360876 PREX2Q70Z35 1606 aa23.26■■□□□ 1.31
EIF3B-201ENST00000360876 CENPJQ9HC77 1338 aaPredicted RBP23.26■■□□□ 1.31
EIF3B-201ENST00000360876 MORC1Q86VD1 984 aa23.26■■□□□ 1.31
EIF3B-201ENST00000360876 WWC1Q8IX03 1113 aa23.24■■□□□ 1.31
EIF3B-201ENST00000360876 GGT6Q6P531 493 aa23.24■■□□□ 1.31
EIF3B-201ENST00000360876 POGKQ9P215 609 aa23.23■■□□□ 1.31
EIF3B-201ENST00000360876 PCDHB15Q9Y5E8 787 aa23.22■■□□□ 1.31
EIF3B-201ENST00000360876 CDCA8Q53HL2 280 aa23.22■■□□□ 1.31
EIF3B-201ENST00000360876 EIF5BO60841 1220 aaKnown RBP23.22■■□□□ 1.31
EIF3B-201ENST00000360876 TCP11L2Q8N4U5 519 aa23.22■■□□□ 1.31
EIF3B-201ENST00000360876 TSR2Q969E8 191 aaKnown RBP23.22■■□□□ 1.31
EIF3B-201ENST00000360876 USP35Q9P2H5 1018 aa23.21■■□□□ 1.31
EIF3B-201ENST00000360876 E9PSI1 815 aa23.2■■□□□ 1.3
EIF3B-201ENST00000360876 SCAPERQ9BY12 1400 aa23.2■■□□□ 1.3
EIF3B-201ENST00000360876 MTHFSP49914 203 aa23.19■■□□□ 1.3
EIF3B-201ENST00000360876 CFAP65Q6ZU64 1925 aaKnown RBP23.19■■□□□ 1.3
EIF3B-201ENST00000360876 STK26Q9P289 416 aa23.19■■□□□ 1.3
EIF3B-201ENST00000360876 ASXL1Q8IXJ9 1541 aa23.18■■□□□ 1.3
EIF3B-201ENST00000360876 SCAF11Q99590 1463 aaKnown RBP23.18■■□□□ 1.3
EIF3B-201ENST00000360876 GZF1Q9H116 711 aaPredicted RBP23.17■■□□□ 1.3
EIF3B-201ENST00000360876 USP19O94966 1318 aa23.17■■□□□ 1.3
EIF3B-201ENST00000360876 ATP10AO60312 1499 aa23.17■■□□□ 1.3
EIF3B-201ENST00000360876 NKTRP30414 1462 aaKnown RBP23.17■■□□□ 1.3
EIF3B-201ENST00000360876 U2SURPO15042 1029 aaKnown RBP23.16■■□□□ 1.3
EIF3B-201ENST00000360876 U2AF1L5P0DN76 240 aaPredicted RBP23.16■■□□□ 1.3
EIF3B-201ENST00000360876 U2AF1Q01081 240 aaKnown RBP eCLIP23.16■■□□□ 1.3
EIF3B-201ENST00000360876 FBLN1P23142 703 aa23.15■■□□□ 1.3
EIF3B-201ENST00000360876 TRMT2AQ8IZ69 625 aaKnown RBP23.15■■□□□ 1.3
EIF3B-201ENST00000360876 UNC13BO14795 1591 aa23.15■■□□□ 1.3
EIF3B-201ENST00000360876 DUOX2Q9NRD8 1548 aa23.14■■□□□ 1.29
EIF3B-201ENST00000360876 MAST1Q9Y2H9 1570 aa23.14■■□□□ 1.29
EIF3B-201ENST00000360876 CABP2Q9NPB3 220 aa23.13■■□□□ 1.29
EIF3B-201ENST00000360876 NSD3Q9BZ95 1437 aa23.13■■□□□ 1.29
EIF3B-201ENST00000360876 PDZRN3Q9UPQ7 1066 aa23.12■■□□□ 1.29
EIF3B-201ENST00000360876 IQGAP3Q86VI3 1631 aa23.12■■□□□ 1.29
EIF3B-201ENST00000360876 RARSP54136 660 aaKnown RBP23.11■■□□□ 1.29
EIF3B-201ENST00000360876 PLCH2O75038 1416 aa23.11■■□□□ 1.29
EIF3B-201ENST00000360876 MADDQ8WXG6 1647 aa23.09■■□□□ 1.29
EIF3B-201ENST00000360876 MFAP1P55081 439 aaKnown RBP23.08■■□□□ 1.29
EIF3B-201ENST00000360876 EIF2AK4Q9P2K8 1649 aaKnown RBP23.08■■□□□ 1.29
EIF3B-201ENST00000360876 GGNBP2Q9H3C7 697 aa23.08■■□□□ 1.29
EIF3B-201ENST00000360876 CLTCL1P53675 1640 aa23.08■■□□□ 1.28
EIF3B-201ENST00000360876 ERVK-7P63135 1459 aa23.07■■□□□ 1.28
EIF3B-201ENST00000360876 EIF3AQ14152 1382 aaKnown RBP23.06■■□□□ 1.28
EIF3B-201ENST00000360876 PIK3C2GO75747 1445 aa23.06■■□□□ 1.28
EIF3B-201ENST00000360876 NOS1P29475 1434 aa23.05■■□□□ 1.28
EIF3B-201ENST00000360876 CGNL1Q0VF96 1302 aa23.05■■□□□ 1.28
EIF3B-201ENST00000360876 CHD1O14646 1710 aa23.04■■□□□ 1.28
EIF3B-201ENST00000360876 FTSJ3Q8IY81 847 aaKnown RBP23.04■■□□□ 1.28
EIF3B-201ENST00000360876 KANK1Q14678 1352 aa23.03■■□□□ 1.28
EIF3B-201ENST00000360876 RUNDC1Q96C34 613 aa23.03■■□□□ 1.28
EIF3B-201ENST00000360876 INSRP06213 1382 aa23.03■■□□□ 1.28
EIF3B-201ENST00000360876 ITPRIPQ8IWB1 547 aa23.01■■□□□ 1.27
EIF3B-201ENST00000360876 FOXD4L1Q9NU39 408 aa23.01■■□□□ 1.27
EIF3B-201ENST00000360876 EXOSC9Q06265 439 aaKnown RBP23■■□□□ 1.27
EIF3B-201ENST00000360876 SMC4Q9NTJ3 1288 aa23■■□□□ 1.27
EIF3B-201ENST00000360876 ABCC2Q92887 1545 aa23■■□□□ 1.27
EIF3B-201ENST00000360876 PDE3AQ14432 1141 aa23■■□□□ 1.27
EIF3B-201ENST00000360876 TBC1D2Q9BYX2 928 aa23■■□□□ 1.27
EIF3B-201ENST00000360876 ELL2O00472 640 aaPredicted RBP22.99■■□□□ 1.27
EIF3B-201ENST00000360876 RNF17Q9BXT8 1623 aaKnown RBP22.98■■□□□ 1.27
EIF3B-201ENST00000360876 PRKCSHP14314 528 aaPredicted RBP22.98■■□□□ 1.27
EIF3B-201ENST00000360876 SRPK2P78362 688 aaKnown RBP22.97■■□□□ 1.27
EIF3B-201ENST00000360876 MYOM1P52179 1685 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms