RNA–Protein interactions for RNA: ENST00000360467.5

COL4A2-201, Transcript of collagen type IV alpha 2 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A2, Length 6,281 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-201ENST00000360467 CEP89Q96ST8 783 aa21.12■□□□□ 0.97
COL4A2-201ENST00000360467 AMOTL1Q8IY63 956 aa21.12■□□□□ 0.97
COL4A2-201ENST00000360467 KDM4AO75164 1064 aa21.11■□□□□ 0.97
COL4A2-201ENST00000360467 PTMSP20962 102 aa21.11■□□□□ 0.97
COL4A2-201ENST00000360467 TOP2AP11388 1531 aaKnown RBP21.11■□□□□ 0.97
COL4A2-201ENST00000360467 ZNF428Q96B54 188 aa21.11■□□□□ 0.97
COL4A2-201ENST00000360467 CSPP1Q1MSJ5 1256 aa21.11■□□□□ 0.97
COL4A2-201ENST00000360467 COG6Q9Y2V7 657 aa21.11■□□□□ 0.97
COL4A2-201ENST00000360467 UACAQ9BZF9 1416 aa21.11■□□□□ 0.97
COL4A2-201ENST00000360467 DIAPH3Q9NSV4 1193 aa21.1■□□□□ 0.97
COL4A2-201ENST00000360467 MTMR7Q9Y216 660 aa21.09■□□□□ 0.97
COL4A2-201ENST00000360467 RIPK4P57078 832 aa21.09■□□□□ 0.97
COL4A2-201ENST00000360467 SYNE3Q6ZMZ3 975 aa21.09■□□□□ 0.97
COL4A2-201ENST00000360467 FANCD2Q9BXW9 1451 aa21.09■□□□□ 0.97
COL4A2-201ENST00000360467 ANO2Q9NQ90 1003 aa21.09■□□□□ 0.97
COL4A2-201ENST00000360467 PPP1R1BQ9UD71 204 aaPredicted RBP21.09■□□□□ 0.97
COL4A2-201ENST00000360467 GOLGA6L3A6NEY3 463 aa21.08■□□□□ 0.97
COL4A2-201ENST00000360467 DIAPH1O60610 1272 aaKnown RBP21.08■□□□□ 0.97
COL4A2-201ENST00000360467 CRBNQ96SW2 442 aa21.08■□□□□ 0.97
COL4A2-201ENST00000360467 APAF1O14727 1248 aa21.07■□□□□ 0.96
COL4A2-201ENST00000360467 IFIT2P09913 472 aaKnown RBP21.07■□□□□ 0.96
COL4A2-201ENST00000360467 NLRP2Q9NX02 1062 aa21.07■□□□□ 0.96
COL4A2-201ENST00000360467 CABP2Q9NPB3 220 aa21.06■□□□□ 0.96
COL4A2-201ENST00000360467 ZKSCAN2Q63HK3 967 aa21.06■□□□□ 0.96
COL4A2-201ENST00000360467 RBM33Q96EV2 1170 aaKnown RBP21.06■□□□□ 0.96
COL4A2-201ENST00000360467 FKBP5Q13451 457 aaPredicted RBP21.06■□□□□ 0.96
COL4A2-201ENST00000360467 TSPYL4Q9UJ04 414 aa21.04■□□□□ 0.96
COL4A2-201ENST00000360467 CCDC27Q2M243 656 aa21.04■□□□□ 0.96
COL4A2-201ENST00000360467 EXOC6Q8TAG9 804 aa21.04■□□□□ 0.96
COL4A2-201ENST00000360467 NFXL1Q6ZNB6 911 aa21.04■□□□□ 0.96
COL4A2-201ENST00000360467 TMEM132EQ6IEE7 984 aa21.03■□□□□ 0.96
COL4A2-201ENST00000360467 CNKSR2Q8WXI2 1034 aa21.03■□□□□ 0.96
COL4A2-201ENST00000360467 TPM3P06753 285 aa21.03■□□□□ 0.96
COL4A2-201ENST00000360467 USP47Q96K76 1375 aa21.03■□□□□ 0.96
COL4A2-201ENST00000360467 RUSC2Q8N2Y8 1516 aa21.03■□□□□ 0.96
COL4A2-201ENST00000360467 PCMTD1Q96MG8 357 aaPredicted RBP21.02■□□□□ 0.96
COL4A2-201ENST00000360467 RAPGEF4Q8WZA2 1011 aa21.02■□□□□ 0.95
COL4A2-201ENST00000360467 NUTM2BA6NNL0 878 aaPredicted RBP21.01■□□□□ 0.95
COL4A2-201ENST00000360467 NUTM2EB1AL46 878 aaPredicted RBP21.01■□□□□ 0.95
COL4A2-201ENST00000360467 NUTM2AQ8IVF1 878 aaPredicted RBP21.01■□□□□ 0.95
COL4A2-201ENST00000360467 RIC3Q7Z5B4 369 aa21.01■□□□□ 0.95
COL4A2-201ENST00000360467 STRN4Q9NRL3 753 aa21.01■□□□□ 0.95
COL4A2-201ENST00000360467 NEUROD6Q96NK8 337 aa21.01■□□□□ 0.95
COL4A2-201ENST00000360467 KIF3AQ9Y496 699 aa21.01■□□□□ 0.95
COL4A2-201ENST00000360467 GGNBP2Q9H3C7 697 aa21.01■□□□□ 0.95
COL4A2-201ENST00000360467 ZNF644Q9H582 1327 aaPredicted RBP21■□□□□ 0.95
COL4A2-201ENST00000360467 CCAR2Q8N163 923 aaKnown RBP21■□□□□ 0.95
COL4A2-201ENST00000360467 PHLDB1Q86UU1 1377 aa21■□□□□ 0.95
COL4A2-201ENST00000360467 TRIM29Q14134 588 aa21■□□□□ 0.95
COL4A2-201ENST00000360467 E9PSI1 815 aa20.99■□□□□ 0.95
COL4A2-201ENST00000360467 G3BP1Q13283 466 aaKnown RBP eCLIP20.99■□□□□ 0.95
COL4A2-201ENST00000360467 DDX58O95786 925 aaKnown RBP20.99■□□□□ 0.95
COL4A2-201ENST00000360467 KRI1Q8N9T8 703 aaKnown RBP20.98■□□□□ 0.95
COL4A2-201ENST00000360467 ESCO1Q5FWF5 840 aa20.98■□□□□ 0.95
COL4A2-201ENST00000360467 IPO9Q96P70 1041 aaKnown RBP20.97■□□□□ 0.95
COL4A2-201ENST00000360467 GOLGA6L1Q8N7Z2 621 aa20.96■□□□□ 0.95
COL4A2-201ENST00000360467 RBM42Q9BTD8 480 aaKnown RBP20.96■□□□□ 0.95
COL4A2-201ENST00000360467 PDE3BQ13370 1112 aa20.96■□□□□ 0.95
COL4A2-201ENST00000360467 RAD54L2Q9Y4B4 1467 aa20.96■□□□□ 0.95
COL4A2-201ENST00000360467 CPLX1O14810 134 aa20.95■□□□□ 0.94
COL4A2-201ENST00000360467 PHF14O94880 888 aa20.95■□□□□ 0.94
COL4A2-201ENST00000360467 TPM2P07951 284 aa20.94■□□□□ 0.94
COL4A2-201ENST00000360467 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.94■□□□□ 0.94
COL4A2-201ENST00000360467 TSR1Q2NL82 804 aaKnown RBP20.94■□□□□ 0.94
COL4A2-201ENST00000360467 GOLGA6L19H0YKK7 550 aa20.93■□□□□ 0.94
COL4A2-201ENST00000360467 WASHC4Q2M389 1173 aa20.93■□□□□ 0.94
COL4A2-201ENST00000360467 RRP1P56182 461 aaKnown RBP20.93■□□□□ 0.94
COL4A2-201ENST00000360467 NLRP6P59044 892 aa20.93■□□□□ 0.94
COL4A2-201ENST00000360467 ERICH2A1L162 156 aa20.92■□□□□ 0.94
COL4A2-201ENST00000360467 PIP4K2BP78356 416 aa20.92■□□□□ 0.94
COL4A2-201ENST00000360467 TRDNQ13061 729 aa20.92■□□□□ 0.94
COL4A2-201ENST00000360467 CENPQQ7L2Z9 268 aaPredicted RBP20.92■□□□□ 0.94
COL4A2-201ENST00000360467 CCDC43Q96MW1 224 aaKnown RBP20.92■□□□□ 0.94
COL4A2-201ENST00000360467 LRRFIP1Q32MZ4 808 aaKnown RBP20.91■□□□□ 0.94
COL4A2-201ENST00000360467 ABTB2Q8N961 1025 aa20.91■□□□□ 0.94
COL4A2-201ENST00000360467 BECN2A8MW95 431 aa20.91■□□□□ 0.94
COL4A2-201ENST00000360467 RUFY2Q8WXA3 655 aa20.91■□□□□ 0.94
COL4A2-201ENST00000360467 DDX49Q9Y6V7 483 aaKnown RBP20.91■□□□□ 0.94
COL4A2-201ENST00000360467 ATAD2BQ9ULI0 1458 aa20.9■□□□□ 0.94
COL4A2-201ENST00000360467 IKQ13123 557 aaPredicted RBP20.89■□□□□ 0.93
COL4A2-201ENST00000360467 ZKSCAN1P17029 563 aaPredicted RBP20.89■□□□□ 0.93
COL4A2-201ENST00000360467 STK11IPQ8N1F8 1099 aa20.89■□□□□ 0.93
COL4A2-201ENST00000360467 ZNF592Q92610 1267 aa20.89■□□□□ 0.93
COL4A2-201ENST00000360467 DZIP1LQ8IYY4 767 aaKnown RBP20.88■□□□□ 0.93
COL4A2-201ENST00000360467 BCL11BQ9C0K0 894 aaPredicted RBP20.88■□□□□ 0.93
COL4A2-201ENST00000360467 AQRO60306 1485 aaKnown RBP eCLIP20.88■□□□□ 0.934e-8■■■■■ 34.1
COL4A2-201ENST00000360467 FAM161AQ3B820 660 aa20.88■□□□□ 0.93
COL4A2-201ENST00000360467 GAPVD1Q14C86 1478 aa20.87■□□□□ 0.93
COL4A2-201ENST00000360467 CPLX2Q6PUV4 134 aaKnown RBP20.87■□□□□ 0.93
COL4A2-201ENST00000360467 DHX57Q6P158 1386 aaKnown RBP20.87■□□□□ 0.93
COL4A2-201ENST00000360467 VPS37CA5D8V6 355 aaPredicted RBP20.86■□□□□ 0.93
COL4A2-201ENST00000360467 PROSER2Q86WR7 435 aaPredicted RBP20.86■□□□□ 0.93
COL4A2-201ENST00000360467 PRKRIP1Q9H875 184 aaPredicted RBP20.86■□□□□ 0.93
COL4A2-201ENST00000360467 DDX19BQ9UMR2 479 aa20.85■□□□□ 0.93
COL4A2-201ENST00000360467 ARHGAP5Q13017 1502 aa20.85■□□□□ 0.93
COL4A2-201ENST00000360467 PATL2C9JE40 543 aaKnown RBP20.85■□□□□ 0.93
COL4A2-201ENST00000360467 TSHZ2Q9NRE2 1034 aa20.85■□□□□ 0.93
COL4A2-201ENST00000360467 SMARCA4P51532 1647 aa20.85■□□□□ 0.93
COL4A2-201ENST00000360467 BICD2Q8TD16 824 aa20.85■□□□□ 0.93
COL4A2-201ENST00000360467 RUNDC1Q96C34 613 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms