RNA–Protein interactions for RNA: ENST00000359785.9

PTPN22-201, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN22, Length 3,654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-201ENST00000359785 KNDC1Q76NI1 1749 aa6.08□□□□□ -1.44
PTPN22-201ENST00000359785 ASXL1Q8IXJ9 1541 aa6.08□□□□□ -1.44
PTPN22-201ENST00000359785 ARHGEF40Q8TER5 1519 aa6.08□□□□□ -1.44
PTPN22-201ENST00000359785 ERVK-7P63135 1459 aa6.08□□□□□ -1.44
PTPN22-201ENST00000359785 PNISRQ8TF01 805 aaKnown RBP6.07□□□□□ -1.44
PTPN22-201ENST00000359785 EFCAB6Q5THR3 1501 aa6.07□□□□□ -1.44
PTPN22-201ENST00000359785 A2MP01023 1474 aa6.07□□□□□ -1.44
PTPN22-201ENST00000359785 GLI2P10070 1586 aa6.07□□□□□ -1.44
PTPN22-201ENST00000359785 ADGRB3O60242 1522 aa6.07□□□□□ -1.44
PTPN22-201ENST00000359785 CAMSAP1Q5T5Y3 1602 aa6.07□□□□□ -1.44
PTPN22-201ENST00000359785 NEXMIFQ5QGS0 1516 aa6.07□□□□□ -1.44
PTPN22-201ENST00000359785 SETD1AO15047 1707 aaKnown RBP6.06□□□□□ -1.44
PTPN22-201ENST00000359785 EIF4G2P78344 907 aaKnown RBP eCLIP6.06□□□□□ -1.44
PTPN22-201ENST00000359785 NRKQ7Z2Y5 1582 aa6.06□□□□□ -1.44
PTPN22-201ENST00000359785 MROH2AA6NES4 1674 aa6.06□□□□□ -1.44
PTPN22-201ENST00000359785 CCDC136Q96JN2 1154 aa6.06□□□□□ -1.44
PTPN22-201ENST00000359785 MYBBP1AQ9BQG0 1328 aaKnown RBP6.06□□□□□ -1.44
PTPN22-201ENST00000359785 YTHDC1Q96MU7 727 aaKnown RBP6.05□□□□□ -1.44
PTPN22-201ENST00000359785 ZFYVE16Q7Z3T8 1539 aa6.05□□□□□ -1.44
PTPN22-201ENST00000359785 FSD2A1L4K1 749 aa6.05□□□□□ -1.44
PTPN22-201ENST00000359785 HSPA5P11021 654 aaKnown RBP6.05□□□□□ -1.44
PTPN22-201ENST00000359785 USP47Q96K76 1375 aa6.05□□□□□ -1.44
PTPN22-201ENST00000359785 PREX1Q8TCU6 1659 aa6.05□□□□□ -1.44
PTPN22-201ENST00000359785 HECW2Q9P2P5 1572 aa6.04□□□□□ -1.44
PTPN22-201ENST00000359785 PLB1Q6P1J6 1458 aa6.04□□□□□ -1.44
PTPN22-201ENST00000359785 ATP7AQ04656 1500 aa6.04□□□□□ -1.44
PTPN22-201ENST00000359785 CLEC17AQ6ZS10 378 aa6.04□□□□□ -1.44
PTPN22-201ENST00000359785 IL27Q8NEV9 243 aa6.04□□□□□ -1.44
PTPN22-201ENST00000359785 NALCNQ8IZF0 1738 aa6.03□□□□□ -1.44
PTPN22-201ENST00000359785 PLEKHH1Q9ULM0 1364 aa6.03□□□□□ -1.44
PTPN22-201ENST00000359785 PPIP5K1Q6PFW1 1433 aa6.03□□□□□ -1.44
PTPN22-201ENST00000359785 CEP170BQ9Y4F5 1589 aaPredicted RBP6.03□□□□□ -1.44
PTPN22-201ENST00000359785 RRP1P56182 461 aaKnown RBP6.03□□□□□ -1.44
PTPN22-201ENST00000359785 TDRD9Q8NDG6 1382 aaKnown RBP6.03□□□□□ -1.44
PTPN22-201ENST00000359785 MYO5BQ9ULV0 1848 aa6.02□□□□□ -1.45
PTPN22-201ENST00000359785 DDIT3P35638 169 aa6.02□□□□□ -1.45
PTPN22-201ENST00000359785 CGNL1Q0VF96 1302 aa6.02□□□□□ -1.45
PTPN22-201ENST00000359785 LRRC37A3O60309 1634 aa6.02□□□□□ -1.45
PTPN22-201ENST00000359785 ADRA2BP18089 450 aa6.02□□□□□ -1.45
PTPN22-201ENST00000359785 DDX10Q13206 875 aaKnown RBP6.02□□□□□ -1.45
PTPN22-201ENST00000359785 C9orf84Q5VXU9 1444 aa6.01□□□□□ -1.45
PTPN22-201ENST00000359785 ANP32AP39687 249 aaKnown RBP6.01□□□□□ -1.45
PTPN22-201ENST00000359785 ABCC3O15438 1527 aa6.01□□□□□ -1.45
PTPN22-201ENST00000359785 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6□□□□□ -1.45
PTPN22-201ENST00000359785 NKTRP30414 1462 aaKnown RBP6□□□□□ -1.45
PTPN22-201ENST00000359785 CDK12Q9NYV4 1490 aaPredicted RBP6□□□□□ -1.45
PTPN22-201ENST00000359785 AKAP12Q02952 1782 aa6□□□□□ -1.45
PTPN22-201ENST00000359785 RGPD1P0DJD0 1748 aa6□□□□□ -1.45
PTPN22-201ENST00000359785 CFAP65Q6ZU64 1925 aaKnown RBP6□□□□□ -1.45
PTPN22-201ENST00000359785 PER1O15534 1290 aaPredicted RBP6□□□□□ -1.45
PTPN22-201ENST00000359785 COL3A1P02461 1466 aaPredicted RBP6□□□□□ -1.45
PTPN22-201ENST00000359785 MED1Q15648 1581 aaPredicted RBP6□□□□□ -1.45
PTPN22-201ENST00000359785 PAK3O75914 559 aaPredicted RBP6□□□□□ -1.45
PTPN22-201ENST00000359785 MPHOSPH9Q99550 1183 aa6□□□□□ -1.45
PTPN22-201ENST00000359785 MON2Q7Z3U7 1717 aa6□□□□□ -1.45
PTPN22-201ENST00000359785 ANKRD50Q9ULJ7 1429 aa5.99□□□□□ -1.45
PTPN22-201ENST00000359785 RRP9O43818 475 aaKnown RBP5.99□□□□□ -1.45
PTPN22-201ENST00000359785 PUS7Q96PZ0 661 aaKnown RBP5.99□□□□□ -1.45
PTPN22-201ENST00000359785 SIN3AQ96ST3 1273 aa5.99□□□□□ -1.45
PTPN22-201ENST00000359785 ANTXR1Q9H6X2 564 aa5.99□□□□□ -1.45
PTPN22-201ENST00000359785 GSE1Q14687 1217 aa5.99□□□□□ -1.45
PTPN22-201ENST00000359785 CACNA1FO60840 1977 aa5.99□□□□□ -1.45
PTPN22-201ENST00000359785 USP19O94966 1318 aa5.99□□□□□ -1.45
PTPN22-201ENST00000359785 CLCN1P35523 988 aa5.98□□□□□ -1.45
PTPN22-201ENST00000359785 CENPQQ7L2Z9 268 aaPredicted RBP5.98□□□□□ -1.45
PTPN22-201ENST00000359785 TOPAZ1Q8N9V7 1692 aa5.98□□□□□ -1.45
PTPN22-201ENST00000359785 MYH15Q9Y2K3 1946 aa5.98□□□□□ -1.45
PTPN22-201ENST00000359785 IL17RAQ96F46 866 aa5.98□□□□□ -1.45
PTPN22-201ENST00000359785 DDX60Q8IY21 1712 aaKnown RBP5.97□□□□□ -1.45
PTPN22-201ENST00000359785 NBPF8Q3BBV2 869 aa5.97□□□□□ -1.45
PTPN22-201ENST00000359785 PIAS4Q8N2W9 510 aaPredicted RBP5.97□□□□□ -1.45
PTPN22-201ENST00000359785 LMTK3Q96Q04 1460 aa5.97□□□□□ -1.45
PTPN22-201ENST00000359785 POLR3AO14802 1390 aaPredicted RBP5.97□□□□□ -1.45
PTPN22-201ENST00000359785 C8orf34Q49A92 452 aa5.97□□□□□ -1.45
PTPN22-201ENST00000359785 HS1BP3Q53T59 392 aa5.97□□□□□ -1.45
PTPN22-201ENST00000359785 PPP6R1Q9UPN7 881 aa5.97□□□□□ -1.45
PTPN22-201ENST00000359785 ATAD2Q6PL18 1390 aa5.96□□□□□ -1.46
PTPN22-201ENST00000359785 PIK3R4Q99570 1358 aa5.96□□□□□ -1.46
PTPN22-201ENST00000359785 RSPH4AQ5TD94 716 aa5.96□□□□□ -1.46
PTPN22-201ENST00000359785 PTMSP20962 102 aa5.96□□□□□ -1.46
PTPN22-201ENST00000359785 PDE4AP27815 886 aa5.96□□□□□ -1.46
PTPN22-201ENST00000359785 NLRP13Q86W25 1043 aa5.95□□□□□ -1.46
PTPN22-201ENST00000359785 DLC1Q96QB1 1528 aa5.95□□□□□ -1.46
PTPN22-201ENST00000359785 HNRNPUQ00839 825 aaKnown RBP eCLIP5.95□□□□□ -1.46
PTPN22-201ENST00000359785 ZBTB47Q9UFB7 747 aaPredicted RBP5.95□□□□□ -1.46
PTPN22-201ENST00000359785 NSD2O96028 1365 aa5.95□□□□□ -1.46
PTPN22-201ENST00000359785 SLC24A1O60721 1099 aa5.95□□□□□ -1.46
PTPN22-201ENST00000359785 L3MBTL2Q969R5 705 aa5.95□□□□□ -1.46
PTPN22-201ENST00000359785 KIF16BQ96L93 1317 aa5.95□□□□□ -1.46
PTPN22-201ENST00000359785 ATP10BO94823 1461 aa5.94□□□□□ -1.46
PTPN22-201ENST00000359785 L1TD1Q5T7N2 865 aaKnown RBP5.94□□□□□ -1.46
PTPN22-201ENST00000359785 ZFYVE9O95405 1425 aa5.94□□□□□ -1.46
PTPN22-201ENST00000359785 KIDINS220Q9ULH0 1771 aa5.94□□□□□ -1.46
PTPN22-201ENST00000359785 RIMBP3CA6NJZ7 1639 aa5.94□□□□□ -1.46
PTPN22-201ENST00000359785 RIMBP3BA6NNM3 1639 aa5.94□□□□□ -1.46
PTPN22-201ENST00000359785 RIMBP3Q9UFD9 1639 aa5.94□□□□□ -1.46
PTPN22-201ENST00000359785 PHRF1Q9P1Y6 1649 aaKnown RBP5.94□□□□□ -1.46
PTPN22-201ENST00000359785 CCDC27Q2M243 656 aa5.94□□□□□ -1.46
PTPN22-201ENST00000359785 KIF24Q5T7B8 1368 aa5.94□□□□□ -1.46
PTPN22-201ENST00000359785 FAM135BQ49AJ0 1406 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms