RNA–Protein interactions for RNA: ENST00000356924.8

ABCD4-201, Transcript of ATP binding cassette subfamily D member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCD4, Length 3,003 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-201ENST00000356924 NRXN1Q9ULB1 1477 aa15.5■□□□□ 0.07
ABCD4-201ENST00000356924 KIF7Q2M1P5 1343 aa15.5■□□□□ 0.07
ABCD4-201ENST00000356924 ERVK-7P63135 1459 aa15.49■□□□□ 0.07
ABCD4-201ENST00000356924 IQGAP1P46940 1657 aa15.48■□□□□ 0.07
ABCD4-201ENST00000356924 ST20-MTHFSA0A0A6YYL1 179 aa15.47■□□□□ 0.07
ABCD4-201ENST00000356924 MLECQ14165 292 aa15.47■□□□□ 0.07
ABCD4-201ENST00000356924 ANP32EQ9BTT0 268 aa15.47■□□□□ 0.07
ABCD4-201ENST00000356924 ADGRF5Q8IZF2 1346 aa15.47■□□□□ 0.07
ABCD4-201ENST00000356924 MYO5BQ9ULV0 1848 aa15.47■□□□□ 0.07
ABCD4-201ENST00000356924 FBXO31Q5XUX0 539 aaPredicted RBP15.46■□□□□ 0.07
ABCD4-201ENST00000356924 CHGAP10645 457 aaKnown RBP15.46■□□□□ 0.07
ABCD4-201ENST00000356924 SPATA31D1Q6ZQQ2 1576 aa15.46■□□□□ 0.07
ABCD4-201ENST00000356924 TMEM131LA2VDJ0 1609 aa15.46■□□□□ 0.06
ABCD4-201ENST00000356924 IDI1Q13907 227 aa15.46■□□□□ 0.06
ABCD4-201ENST00000356924 NEXMIFQ5QGS0 1516 aa15.45■□□□□ 0.06
ABCD4-201ENST00000356924 SLC52A1Q9NWF4 448 aa15.44■□□□□ 0.06
ABCD4-201ENST00000356924 RPGRIP1LQ68CZ1 1315 aa15.44■□□□□ 0.06
ABCD4-201ENST00000356924 ARID4BQ4LE39 1312 aaPredicted RBP15.43■□□□□ 0.06
ABCD4-201ENST00000356924 PIK3C2GO75747 1445 aa15.41■□□□□ 0.06
ABCD4-201ENST00000356924 SCAF11Q99590 1463 aaKnown RBP15.41■□□□□ 0.06
ABCD4-201ENST00000356924 CFAP70Q5T0N1 1121 aa15.41■□□□□ 0.06
ABCD4-201ENST00000356924 TESK2Q96S53 571 aa15.4■□□□□ 0.06
ABCD4-201ENST00000356924 ZMYM3Q14202 1370 aa15.4■□□□□ 0.06
ABCD4-201ENST00000356924 SETBP1Q9Y6X0 1596 aa15.4■□□□□ 0.06
ABCD4-201ENST00000356924 ANP32CO43423 234 aa15.39■□□□□ 0.05
ABCD4-201ENST00000356924 ZFYVE9O95405 1425 aa15.37■□□□□ 0.05
ABCD4-201ENST00000356924 ADGRB1O14514 1584 aa15.36■□□□□ 0.05
ABCD4-201ENST00000356924 C14orf93Q9H972 538 aaKnown RBP15.36■□□□□ 0.05
ABCD4-201ENST00000356924 DISP3Q9P2K9 1392 aa15.36■□□□□ 0.05
ABCD4-201ENST00000356924 ESF1Q9H501 851 aaKnown RBP15.35■□□□□ 0.05
ABCD4-201ENST00000356924 MYO3AQ8NEV4 1616 aa15.34■□□□□ 0.05
ABCD4-201ENST00000356924 A2ML1A8K2U0 1454 aa15.34■□□□□ 0.05
ABCD4-201ENST00000356924 NUTM2DQ5VT03 806 aaPredicted RBP15.34■□□□□ 0.05
ABCD4-201ENST00000356924 POLR3GLQ9BT43 218 aa15.34■□□□□ 0.05
ABCD4-201ENST00000356924 CCER2I3L3R5 266 aa15.34■□□□□ 0.05
ABCD4-201ENST00000356924 VGFO15240 615 aaPredicted RBP15.34■□□□□ 0.05
ABCD4-201ENST00000356924 SUPT16HQ9Y5B9 1047 aaKnown RBP15.33■□□□□ 0.04
ABCD4-201ENST00000356924 FER1L4A9Z1Z3 1794 aa15.33■□□□□ 0.04
ABCD4-201ENST00000356924 BCANQ96GW7 911 aa15.32■□□□□ 0.04
ABCD4-201ENST00000356924 C3P01024 1663 aa15.32■□□□□ 0.04
ABCD4-201ENST00000356924 EIF3AQ14152 1382 aaKnown RBP15.31■□□□□ 0.04
ABCD4-201ENST00000356924 TSHZ2Q9NRE2 1034 aa15.31■□□□□ 0.04
ABCD4-201ENST00000356924 TNRQ92752 1358 aa15.31■□□□□ 0.04
ABCD4-201ENST00000356924 ASXL1Q8IXJ9 1541 aa15.3■□□□□ 0.04
ABCD4-201ENST00000356924 TMF1P82094 1093 aa15.3■□□□□ 0.04
ABCD4-201ENST00000356924 KDM5AP29375 1690 aaKnown RBP15.29■□□□□ 0.04
ABCD4-201ENST00000356924 UBR1Q8IWV7 1749 aa15.28■□□□□ 0.04
ABCD4-201ENST00000356924 PRKRIP1Q9H875 184 aaPredicted RBP15.28■□□□□ 0.04
ABCD4-201ENST00000356924 STAG3Q9UJ98 1225 aa15.28■□□□□ 0.04
ABCD4-201ENST00000356924 RIMS2Q9UQ26 1411 aa15.28■□□□□ 0.04
ABCD4-201ENST00000356924 TMEM132EQ6IEE7 984 aa15.27■□□□□ 0.04
ABCD4-201ENST00000356924 ARHGEF28Q8N1W1 1705 aaKnown RBP15.27■□□□□ 0.04
ABCD4-201ENST00000356924 QRICH2Q9H0J4 1663 aa15.27■□□□□ 0.03
ABCD4-201ENST00000356924 ALKQ9UM73 1620 aa15.26■□□□□ 0.03
ABCD4-201ENST00000356924 SETD1AO15047 1707 aaKnown RBP15.25■□□□□ 0.03
ABCD4-201ENST00000356924 CEBPAP49715 358 aaPredicted RBP15.25■□□□□ 0.03
ABCD4-201ENST00000356924 MYOM1P52179 1685 aa15.25■□□□□ 0.03
ABCD4-201ENST00000356924 SBNO2Q9Y2G9 1366 aa15.25■□□□□ 0.03
ABCD4-201ENST00000356924 TRAK1Q9UPV9 953 aa15.24■□□□□ 0.03
ABCD4-201ENST00000356924 NRXN3Q9Y4C0 1643 aa15.24■□□□□ 0.03
ABCD4-201ENST00000356924 NLRP1Q9C000 1473 aa15.23■□□□□ 0.03
ABCD4-201ENST00000356924 CENPJQ9HC77 1338 aaPredicted RBP15.23■□□□□ 0.03
ABCD4-201ENST00000356924 PTPRMP28827 1452 aa15.22■□□□□ 0.03
ABCD4-201ENST00000356924 SENP3Q9H4L4 574 aaPredicted RBP15.21■□□□□ 0.03
ABCD4-201ENST00000356924 RIMS1Q86UR5 1692 aaKnown RBP15.21■□□□□ 0.03
ABCD4-201ENST00000356924 PER1O15534 1290 aaPredicted RBP15.21■□□□□ 0.02
ABCD4-201ENST00000356924 ADAMTSL3P82987 1691 aa15.2■□□□□ 0.02
ABCD4-201ENST00000356924 CCDC184Q52MB2 194 aa15.2■□□□□ 0.02
ABCD4-201ENST00000356924 CDCA8Q53HL2 280 aa15.2■□□□□ 0.02
ABCD4-201ENST00000356924 SLC24A1O60721 1099 aa15.19■□□□□ 0.02
ABCD4-201ENST00000356924 YTHDC2Q9H6S0 1430 aaKnown RBP15.19■□□□□ 0.02
ABCD4-201ENST00000356924 PANK3Q9H999 370 aa15.19■□□□□ 0.02
ABCD4-201ENST00000356924 TMEM2Q9UHN6 1383 aa15.19■□□□□ 0.02
ABCD4-201ENST00000356924 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.19■□□□□ 0.02
ABCD4-201ENST00000356924 TULP4Q9NRJ4 1543 aa15.16■□□□□ 0.02
ABCD4-201ENST00000356924 STK26Q9P289 416 aa15.15■□□□□ 0.02
ABCD4-201ENST00000356924 DLC1Q96QB1 1528 aa15.15■□□□□ 0.02
ABCD4-201ENST00000356924 CNGB1Q14028 1251 aaPredicted RBP15.14■□□□□ 0.01
ABCD4-201ENST00000356924 PLPPR3Q6T4P5 718 aa15.14■□□□□ 0.01
ABCD4-201ENST00000356924 SLIT1O75093 1534 aa15.14■□□□□ 0.01
ABCD4-201ENST00000356924 ARHGAP23Q9P227 1491 aa15.14■□□□□ 0.01
ABCD4-201ENST00000356924 KTN1Q86UP2 1357 aaKnown RBP15.14■□□□□ 0.01
ABCD4-201ENST00000356924 HDGFP51858 240 aaKnown RBP15.14■□□□□ 0.01
ABCD4-201ENST00000356924 LRPPRCP42704 1394 aaKnown RBP15.13■□□□□ 0.01
ABCD4-201ENST00000356924 PARD3Q8TEW0 1356 aa15.13■□□□□ 0.01
ABCD4-201ENST00000356924 RALBP1Q15311 655 aa15.12■□□□□ 0.01
ABCD4-201ENST00000356924 KNDC1Q76NI1 1749 aa15.12■□□□□ 0.01
ABCD4-201ENST00000356924 LTKP29376 864 aa15.12■□□□□ 0.01
ABCD4-201ENST00000356924 METP08581 1390 aa15.12■□□□□ 0.01
ABCD4-201ENST00000356924 MRS2Q9HD23 443 aa15.11■□□□□ 0.01
ABCD4-201ENST00000356924 ADAMTS13Q76LX8 1427 aa15.11■□□□□ 0.01
ABCD4-201ENST00000356924 PLEKHG1Q9ULL1 1385 aa15.11■□□□□ 0.01
ABCD4-201ENST00000356924 PRAM1Q96QH2 718 aa15.1■□□□□ 0.01
ABCD4-201ENST00000356924 CEP170BQ9Y4F5 1589 aaPredicted RBP15.1■□□□□ 0.01
ABCD4-201ENST00000356924 ABCC11Q96J66 1382 aa15.1■□□□□ 0.01
ABCD4-201ENST00000356924 PUS7Q96PZ0 661 aaKnown RBP15.1■□□□□ 0.01
ABCD4-201ENST00000356924 MYBBP1AQ9BQG0 1328 aaKnown RBP15.1■□□□□ 0.01
ABCD4-201ENST00000356924 EVC2Q86UK5 1308 aa15.09■□□□□ 0.01
ABCD4-201ENST00000356924 SAFB2Q14151 953 aaKnown RBP eCLIP15.09■□□□□ 0.01
ABCD4-201ENST00000356924 MED14O60244 1454 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms