RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 WASHC2AQ641Q2 1341 aa7.89□□□□□ -1.15
UPF2-201ENST00000356352 AAMPQ13685 434 aa7.89□□□□□ -1.15
UPF2-201ENST00000356352 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.89□□□□□ -1.15
UPF2-201ENST00000356352 TRAK1Q9UPV9 953 aa7.89□□□□□ -1.15
UPF2-201ENST00000356352 MCTP1Q6DN14 999 aa7.88□□□□□ -1.15
UPF2-201ENST00000356352 VPS37DQ86XT2 251 aa7.88□□□□□ -1.15
UPF2-201ENST00000356352 CCDC43Q96MW1 224 aaKnown RBP7.88□□□□□ -1.15
UPF2-201ENST00000356352 RSPH6AQ9H0K4 717 aa7.88□□□□□ -1.15
UPF2-201ENST00000356352 ANO2Q9NQ90 1003 aa7.88□□□□□ -1.15
UPF2-201ENST00000356352 TDRD9Q8NDG6 1382 aaKnown RBP7.88□□□□□ -1.15
UPF2-201ENST00000356352 CECR2Q9BXF3 1484 aa7.88□□□□□ -1.15
UPF2-201ENST00000356352 TEX35Q5T0J7 233 aa7.87□□□□□ -1.15
UPF2-201ENST00000356352 CCAR2Q8N163 923 aaKnown RBP7.87□□□□□ -1.15
UPF2-201ENST00000356352 STAC3Q96MF2 364 aa7.87□□□□□ -1.15
UPF2-201ENST00000356352 ARID3AQ99856 593 aa7.87□□□□□ -1.15
UPF2-201ENST00000356352 ACBD3Q9H3P7 528 aa7.87□□□□□ -1.15
UPF2-201ENST00000356352 PANK3Q9H999 370 aa7.87□□□□□ -1.15
UPF2-201ENST00000356352 TOP2AP11388 1531 aaKnown RBP7.87□□□□□ -1.15
UPF2-201ENST00000356352 ERC2O15083 957 aa7.87□□□□□ -1.15
UPF2-201ENST00000356352 G3BP1Q13283 466 aaKnown RBP eCLIP7.87□□□□□ -1.15
UPF2-201ENST00000356352 SAFBQ15424 915 aaKnown RBP eCLIP7.87□□□□□ -1.15
UPF2-201ENST00000356352 CWC22Q9HCG8 908 aaKnown RBP7.87□□□□□ -1.15
UPF2-201ENST00000356352 ABCC8Q09428 1581 aa7.86□□□□□ -1.15
UPF2-201ENST00000356352 MSH5O43196 834 aa7.86□□□□□ -1.15
UPF2-201ENST00000356352 DHX16O60231 1041 aaKnown RBP7.86□□□□□ -1.15
UPF2-201ENST00000356352 DIAPH1O60610 1272 aaKnown RBP7.86□□□□□ -1.15
UPF2-201ENST00000356352 FOXD4L5Q5VV16 416 aaPredicted RBP7.86□□□□□ -1.15
UPF2-201ENST00000356352 FOXD4L4Q8WXT5 416 aaPredicted RBP7.86□□□□□ -1.15
UPF2-201ENST00000356352 NUTM2DQ5VT03 806 aaPredicted RBP7.86□□□□□ -1.15
UPF2-201ENST00000356352 AK7Q96M32 723 aa7.86□□□□□ -1.15
UPF2-201ENST00000356352 BRMS1Q9HCU9 246 aa7.86□□□□□ -1.15
UPF2-201ENST00000356352 FHOD3Q2V2M9 1422 aa7.86□□□□□ -1.15
UPF2-201ENST00000356352 APPP05067 770 aa7.86□□□□□ -1.15
UPF2-201ENST00000356352 NFXL1Q6ZNB6 911 aa7.86□□□□□ -1.15
UPF2-201ENST00000356352 RRP1P56182 461 aaKnown RBP7.85□□□□□ -1.15
UPF2-201ENST00000356352 MIA2Q96PC5 1412 aa7.85□□□□□ -1.15
UPF2-201ENST00000356352 RDXP35241 583 aaKnown RBP7.85□□□□□ -1.15
UPF2-201ENST00000356352 MEX3CQ5U5Q3 659 aaKnown RBP7.85□□□□□ -1.15
UPF2-201ENST00000356352 INTS3Q68E01 1043 aaKnown RBP7.85□□□□□ -1.15
UPF2-201ENST00000356352 CNKSR2Q8WXI2 1034 aa7.85□□□□□ -1.15
UPF2-201ENST00000356352 ZBED9Q6R2W3 1325 aa7.85□□□□□ -1.15
UPF2-201ENST00000356352 RAD21O60216 631 aa7.85□□□□□ -1.15
UPF2-201ENST00000356352 RRP7AQ9Y3A4 280 aaKnown RBP7.84□□□□□ -1.15
UPF2-201ENST00000356352 NINLQ9Y2I6 1382 aa7.84□□□□□ -1.15
UPF2-201ENST00000356352 XBP1P17861 261 aa7.84□□□□□ -1.15
UPF2-201ENST00000356352 NUCB2P80303 420 aa7.84□□□□□ -1.15
UPF2-201ENST00000356352 HSP90AA2PQ14568 343 aaPredicted RBP7.84□□□□□ -1.15
UPF2-201ENST00000356352 BICD2Q8TD16 824 aa7.84□□□□□ -1.15
UPF2-201ENST00000356352 RBM33Q96EV2 1170 aaKnown RBP7.84□□□□□ -1.15
UPF2-201ENST00000356352 RUFY1Q96T51 708 aa7.84□□□□□ -1.15
UPF2-201ENST00000356352 ARGLU1Q9NWB6 273 aaPredicted RBP7.84□□□□□ -1.15
UPF2-201ENST00000356352 GNAI1P63096 354 aa7.84□□□□□ -1.15
UPF2-201ENST00000356352 RRP12Q5JTH9 1297 aaKnown RBP7.84□□□□□ -1.15
UPF2-201ENST00000356352 SASS6Q6UVJ0 657 aa7.84□□□□□ -1.15
UPF2-201ENST00000356352 PDE4AP27815 886 aa7.84□□□□□ -1.16
UPF2-201ENST00000356352 NAT10Q9H0A0 1025 aaKnown RBP7.84□□□□□ -1.16
UPF2-201ENST00000356352 CADPSQ9ULU8 1353 aa7.83□□□□□ -1.16
UPF2-201ENST00000356352 EIF2S2P20042 333 aaKnown RBP7.83□□□□□ -1.16
UPF2-201ENST00000356352 CCDC73Q6ZRK6 1079 aa7.83□□□□□ -1.16
UPF2-201ENST00000356352 DZIP1LQ8IYY4 767 aaKnown RBP7.83□□□□□ -1.16
UPF2-201ENST00000356352 MYO6Q9UM54 1294 aa7.83□□□□□ -1.16
UPF2-201ENST00000356352 USP47Q96K76 1375 aa7.83□□□□□ -1.16
UPF2-201ENST00000356352 ST20-MTHFSA0A0A6YYL1 179 aa7.83□□□□□ -1.16
UPF2-201ENST00000356352 ODF2Q5BJF6 829 aa7.83□□□□□ -1.16
UPF2-201ENST00000356352 CT47A1Q5JQC4 288 aaPredicted RBP7.83□□□□□ -1.16
UPF2-201ENST00000356352 SMC3Q9UQE7 1217 aa7.83□□□□□ -1.16
UPF2-201ENST00000356352 NUTM2FA1L443 756 aa7.83□□□□□ -1.16
UPF2-201ENST00000356352 PSME1Q06323 249 aa7.83□□□□□ -1.16
UPF2-201ENST00000356352 HOMER1Q86YM7 354 aa7.83□□□□□ -1.16
UPF2-201ENST00000356352 JPH4Q96JJ6 628 aa7.83□□□□□ -1.16
UPF2-201ENST00000356352 CHMP5Q9NZZ3 219 aa7.83□□□□□ -1.16
UPF2-201ENST00000356352 R3HCC1Q9Y3T6 440 aaKnown RBP7.83□□□□□ -1.16
UPF2-201ENST00000356352 CCDC173Q0VFZ6 552 aa7.83□□□□□ -1.16
UPF2-201ENST00000356352 GSE1Q14687 1217 aa7.83□□□□□ -1.16
UPF2-201ENST00000356352 OLFM4Q6UX06 510 aa7.82□□□□□ -1.16
UPF2-201ENST00000356352 RALYLQ86SE5 291 aaKnown RBP7.82□□□□□ -1.16
UPF2-201ENST00000356352 FBXW7Q969H0 707 aa7.82□□□□□ -1.16
UPF2-201ENST00000356352 RUNDC1Q96C34 613 aa7.82□□□□□ -1.16
UPF2-201ENST00000356352 PSMA5P28066 241 aa7.82□□□□□ -1.16
UPF2-201ENST00000356352 PTPRGP23470 1445 aa7.82□□□□□ -1.16
UPF2-201ENST00000356352 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.82□□□□□ -1.16
UPF2-201ENST00000356352 ELL2O00472 640 aaPredicted RBP7.81□□□□□ -1.16
UPF2-201ENST00000356352 FKBP5Q13451 457 aaPredicted RBP7.81□□□□□ -1.16
UPF2-201ENST00000356352 ZNF592Q92610 1267 aa7.81□□□□□ -1.16
UPF2-201ENST00000356352 MROH2BQ7Z745 1585 aa7.81□□□□□ -1.16
UPF2-201ENST00000356352 EPS15P42566 896 aa7.81□□□□□ -1.16
UPF2-201ENST00000356352 RIPK4P57078 832 aa7.81□□□□□ -1.16
UPF2-201ENST00000356352 NOM1Q5C9Z4 860 aaKnown RBP7.81□□□□□ -1.16
UPF2-201ENST00000356352 DHX57Q6P158 1386 aaKnown RBP7.81□□□□□ -1.16
UPF2-201ENST00000356352 LETM1O95202 739 aaPredicted RBP7.81□□□□□ -1.16
UPF2-201ENST00000356352 RAPGEF4Q8WZA2 1011 aa7.81□□□□□ -1.16
UPF2-201ENST00000356352 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.81□□□□□ -1.161e-10■■■■■ 93.8
UPF2-201ENST00000356352 TSHZ2Q9NRE2 1034 aa7.81□□□□□ -1.16
UPF2-201ENST00000356352 CUX1P39880 1505 aa7.81□□□□□ -1.16
UPF2-201ENST00000356352 MINK1Q8N4C8 1332 aaPredicted RBP7.81□□□□□ -1.16
UPF2-201ENST00000356352 ZNF771Q7L3S4 317 aaPredicted RBP7.81□□□□□ -1.16
UPF2-201ENST00000356352 ERCC4Q92889 916 aaPredicted RBP7.81□□□□□ -1.16
UPF2-201ENST00000356352 CRBNQ96SW2 442 aa7.81□□□□□ -1.16
UPF2-201ENST00000356352 KIF7Q2M1P5 1343 aa7.8□□□□□ -1.16
UPF2-201ENST00000356352 DCTN1Q14203 1278 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms