RNA–Protein interactions for RNA: ENST00000356135.9

CHKA-202, Transcript of choline kinase alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHKA, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-202ENST00000356135 PRAG1Q86YV5 1406 aa34.32■■■■□ 3.08
CHKA-202ENST00000356135 SENP3Q9H4L4 574 aaPredicted RBP34.31■■■■□ 3.08
CHKA-202ENST00000356135 STAC3Q96MF2 364 aa34.29■■■■□ 3.08
CHKA-202ENST00000356135 SETD1BQ9UPS6 1966 aaKnown RBP34.29■■■■□ 3.08
CHKA-202ENST00000356135 CEP170BQ9Y4F5 1589 aaPredicted RBP34.29■■■■□ 3.08
CHKA-202ENST00000356135 RIMS2Q9UQ26 1411 aa34.29■■■■□ 3.08
CHKA-202ENST00000356135 KDM5AP29375 1690 aaKnown RBP34.28■■■■□ 3.08
CHKA-202ENST00000356135 MYOM2P54296 1465 aa34.27■■■■□ 3.08
CHKA-202ENST00000356135 VGFO15240 615 aaPredicted RBP34.27■■■■□ 3.08
CHKA-202ENST00000356135 TMEM2Q9UHN6 1383 aa34.26■■■■□ 3.08
CHKA-202ENST00000356135 THEMISQ8N1K5 641 aaPredicted RBP34.26■■■■□ 3.07
CHKA-202ENST00000356135 ZFYVE9O95405 1425 aa34.24■■■■□ 3.07
CHKA-202ENST00000356135 NBPF1Q3BBV0 1214 aa34.21■■■■□ 3.07
CHKA-202ENST00000356135 NRXN1Q9ULB1 1477 aa34.21■■■■□ 3.07
CHKA-202ENST00000356135 LTKP29376 864 aa34.2■■■■□ 3.07
CHKA-202ENST00000356135 ZNF142P52746 1687 aaPredicted RBP34.2■■■■□ 3.06
CHKA-202ENST00000356135 CFAP70Q5T0N1 1121 aa34.19■■■■□ 3.06
CHKA-202ENST00000356135 TXNDC2Q86VQ3 553 aa34.17■■■■□ 3.06
CHKA-202ENST00000356135 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.17■■■■□ 3.06
CHKA-202ENST00000356135 PIK3C2GO75747 1445 aa34.17■■■■□ 3.06
CHKA-202ENST00000356135 TRPM1Q7Z4N2 1603 aa34.16■■■■□ 3.06
CHKA-202ENST00000356135 RALGAPBQ86X10 1494 aa34.16■■■■□ 3.06
CHKA-202ENST00000356135 HDGFP51858 240 aaKnown RBP34.16■■■■□ 3.06
CHKA-202ENST00000356135 ARHGAP23Q9P227 1491 aa34.14■■■■□ 3.06
CHKA-202ENST00000356135 SLIT1O75093 1534 aa34.14■■■■□ 3.06
CHKA-202ENST00000356135 ROCK2O75116 1388 aaKnown RBP34.13■■■■□ 3.05
CHKA-202ENST00000356135 EID1Q9Y6B2 187 aa34.12■■■■□ 3.05
CHKA-202ENST00000356135 C14orf93Q9H972 538 aaKnown RBP34.11■■■■□ 3.05
CHKA-202ENST00000356135 CARD11Q9BXL7 1154 aa34.1■■■■□ 3.05
CHKA-202ENST00000356135 BCANQ96GW7 911 aa34.07■■■■□ 3.04
CHKA-202ENST00000356135 HIRIP3Q9BW71 556 aaPredicted RBP34.07■■■■□ 3.04
CHKA-202ENST00000356135 TMEM132EQ6IEE7 984 aa34.05■■■■□ 3.04
CHKA-202ENST00000356135 HSPA2P54652 639 aa34.03■■■■□ 3.04
CHKA-202ENST00000356135 ANKLE2Q86XL3 938 aa34.03■■■■□ 3.04
CHKA-202ENST00000356135 SCAF11Q99590 1463 aaKnown RBP34.02■■■■□ 3.04
CHKA-202ENST00000356135 KIAA1210Q9ULL0 1709 aa34.02■■■■□ 3.04
CHKA-202ENST00000356135 GPRASP1Q5JY77 1395 aa34.02■■■■□ 3.04
CHKA-202ENST00000356135 PLEKHG1Q9ULL1 1385 aa34■■■■□ 3.03
CHKA-202ENST00000356135 ALKQ9UM73 1620 aa34■■■■□ 3.03
CHKA-202ENST00000356135 LMTK3Q96Q04 1460 aa33.99■■■■□ 3.03
CHKA-202ENST00000356135 NRXN3Q9Y4C0 1643 aa33.99■■■■□ 3.03
CHKA-202ENST00000356135 HSPA5P11021 654 aaKnown RBP33.98■■■■□ 3.03
CHKA-202ENST00000356135 NCKAP5LQ9HCH0 1330 aa33.98■■■■□ 3.03
CHKA-202ENST00000356135 EIF4G2P78344 907 aaKnown RBP eCLIP33.98■■■■□ 3.03
CHKA-202ENST00000356135 SLC26A8Q96RN1 970 aa33.96■■■■□ 3.03
CHKA-202ENST00000356135 IQGAP1P46940 1657 aa33.96■■■■□ 3.03
CHKA-202ENST00000356135 SETBP1Q9Y6X0 1596 aa33.95■■■■□ 3.03
CHKA-202ENST00000356135 USP47Q96K76 1375 aa33.95■■■■□ 3.03
CHKA-202ENST00000356135 ZNF316A6NFI3 1004 aaPredicted RBP33.95■■■■□ 3.02
CHKA-202ENST00000356135 ADGRB1O14514 1584 aa33.94■■■■□ 3.02
CHKA-202ENST00000356135 ADAMTS13Q76LX8 1427 aa33.93■■■■□ 3.02
CHKA-202ENST00000356135 ASXL1Q8IXJ9 1541 aa33.92■■■■□ 3.02
CHKA-202ENST00000356135 LAMC1P11047 1609 aa33.92■■■■□ 3.02
CHKA-202ENST00000356135 METP08581 1390 aa33.9■■■■□ 3.02
CHKA-202ENST00000356135 STK26Q9P289 416 aa33.89■■■■□ 3.02
CHKA-202ENST00000356135 TRAK1Q9UPV9 953 aa33.89■■■■□ 3.02
CHKA-202ENST00000356135 SETD1AO15047 1707 aaKnown RBP33.88■■■■□ 3.01
CHKA-202ENST00000356135 ST20-MTHFSA0A0A6YYL1 179 aa33.87■■■■□ 3.01
CHKA-202ENST00000356135 MED14O60244 1454 aa33.85■■■■□ 3.01
CHKA-202ENST00000356135 TBX22Q9Y458 520 aa33.83■■■■□ 3.01
CHKA-202ENST00000356135 NPHP4O75161 1426 aaPredicted RBP33.83■■■■□ 3.01
CHKA-202ENST00000356135 POLR1AO95602 1720 aaPredicted RBP33.83■■■■□ 3.01
CHKA-202ENST00000356135 YTHDC2Q9H6S0 1430 aaKnown RBP33.81■■■■□ 3
CHKA-202ENST00000356135 LRPPRCP42704 1394 aaKnown RBP33.75■■■□□ 2.99
CHKA-202ENST00000356135 PTPRUQ92729 1446 aa33.74■■■□□ 2.99
CHKA-202ENST00000356135 C11orf95C9JLR9 678 aaPredicted RBP33.72■■■□□ 2.99
CHKA-202ENST00000356135 DIP2AQ14689 1571 aa33.72■■■□□ 2.99
CHKA-202ENST00000356135 EIF3AQ14152 1382 aaKnown RBP33.72■■■□□ 2.99
CHKA-202ENST00000356135 TESK2Q96S53 571 aa33.71■■■□□ 2.99
CHKA-202ENST00000356135 STRCQ7RTU9 1775 aa33.71■■■□□ 2.99
CHKA-202ENST00000356135 ABCC11Q96J66 1382 aa33.7■■■□□ 2.98
CHKA-202ENST00000356135 AMOTL2Q9Y2J4 779 aa33.7■■■□□ 2.98
CHKA-202ENST00000356135 SAFB2Q14151 953 aaKnown RBP eCLIP33.69■■■□□ 2.98
CHKA-202ENST00000356135 WAPLQ7Z5K2 1190 aa33.68■■■□□ 2.98
CHKA-202ENST00000356135 PRAM1Q96QH2 718 aa33.68■■■□□ 2.98
CHKA-202ENST00000356135 ARHGEF28Q8N1W1 1705 aaKnown RBP33.68■■■□□ 2.98
CHKA-202ENST00000356135 CENPJQ9HC77 1338 aaPredicted RBP33.68■■■□□ 2.98
CHKA-202ENST00000356135 POGKQ9P215 609 aa33.64■■■□□ 2.98
CHKA-202ENST00000356135 PLEKHH1Q9ULM0 1364 aa33.64■■■□□ 2.98
CHKA-202ENST00000356135 PIK3R4Q99570 1358 aa33.62■■■□□ 2.97
CHKA-202ENST00000356135 ROBO2Q9HCK4 1378 aa33.62■■■□□ 2.97
CHKA-202ENST00000356135 KCNA6P17658 529 aa33.61■■■□□ 2.97
CHKA-202ENST00000356135 AEBP2Q6ZN18 517 aaPredicted RBP33.61■■■□□ 2.97
CHKA-202ENST00000356135 TECPR2O15040 1411 aa33.61■■■□□ 2.97
CHKA-202ENST00000356135 DLC1Q96QB1 1528 aa33.6■■■□□ 2.97
CHKA-202ENST00000356135 WASHC2AQ641Q2 1341 aa33.59■■■□□ 2.97
CHKA-202ENST00000356135 KNDC1Q76NI1 1749 aa33.58■■■□□ 2.97
CHKA-202ENST00000356135 DIEXFQ68CQ4 756 aaKnown RBP33.57■■■□□ 2.97
CHKA-202ENST00000356135 DISP3Q9P2K9 1392 aa33.57■■■□□ 2.96
CHKA-202ENST00000356135 SIRT1Q96EB6 747 aa33.57■■■□□ 2.96
CHKA-202ENST00000356135 QRICH2Q9H0J4 1663 aa33.57■■■□□ 2.96
CHKA-202ENST00000356135 POLR3GLQ9BT43 218 aa33.56■■■□□ 2.96
CHKA-202ENST00000356135 KIF7Q2M1P5 1343 aa33.56■■■□□ 2.96
CHKA-202ENST00000356135 CHD2O14647 1828 aaKnown RBP33.56■■■□□ 2.96
CHKA-202ENST00000356135 CPS1P31327 1500 aa33.55■■■□□ 2.96
CHKA-202ENST00000356135 MINK1Q8N4C8 1332 aaPredicted RBP33.55■■■□□ 2.96
CHKA-202ENST00000356135 TMF1P82094 1093 aa33.55■■■□□ 2.96
CHKA-202ENST00000356135 XRN1Q8IZH2 1706 aaKnown RBP33.54■■■□□ 2.96
CHKA-202ENST00000356135 FAM135BQ49AJ0 1406 aa33.53■■■□□ 2.96
CHKA-202ENST00000356135 CCDC7Q96M83 1385 aa33.52■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms