RNA–Protein interactions for RNA: ENST00000356090.8

NCDN-201, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,433 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-201ENST00000356090 BLMP54132 1417 aaPredicted RBP17.19■□□□□ 0.34
NCDN-201ENST00000356090 CFAP70Q5T0N1 1121 aa17.18■□□□□ 0.34
NCDN-201ENST00000356090 AFAP1Q8N556 730 aa17.18■□□□□ 0.34
NCDN-201ENST00000356090 ABCC10Q5T3U5 1492 aa17.18■□□□□ 0.34
NCDN-201ENST00000356090 SHANK2Q9UPX8 1470 aa17.18■□□□□ 0.34
NCDN-201ENST00000356090 KDM5DQ9BY66 1539 aa17.17■□□□□ 0.34
NCDN-201ENST00000356090 E9PSI1 815 aa17.17■□□□□ 0.34
NCDN-201ENST00000356090 BECN1Q14457 450 aa17.17■□□□□ 0.34
NCDN-201ENST00000356090 SYCP2Q9BX26 1530 aa17.16■□□□□ 0.34
NCDN-201ENST00000356090 PLA2R1Q13018 1463 aa17.16■□□□□ 0.34
NCDN-201ENST00000356090 CDC42BPAQ5VT25 1732 aa17.16■□□□□ 0.34
NCDN-201ENST00000356090 CROCC2H7BZ55 1655 aa17.15■□□□□ 0.34
NCDN-201ENST00000356090 EFCAB2Q5VUJ9 269 aa17.15■□□□□ 0.34
NCDN-201ENST00000356090 MORC1Q86VD1 984 aa17.15■□□□□ 0.34
NCDN-201ENST00000356090 KIF3BO15066 747 aa17.15■□□□□ 0.34
NCDN-201ENST00000356090 SEC24BO95487 1268 aa17.15■□□□□ 0.34
NCDN-201ENST00000356090 ZMYM4Q5VZL5 1548 aa17.15■□□□□ 0.34
NCDN-201ENST00000356090 GZF1Q9H116 711 aaPredicted RBP17.14■□□□□ 0.33
NCDN-201ENST00000356090 MAGI2Q86UL8 1455 aa17.14■□□□□ 0.33
NCDN-201ENST00000356090 SPAG9O60271 1321 aaKnown RBP17.14■□□□□ 0.33
NCDN-201ENST00000356090 GPRASP1Q5JY77 1395 aa17.13■□□□□ 0.33
NCDN-201ENST00000356090 TRAK1Q9UPV9 953 aa17.13■□□□□ 0.33
NCDN-201ENST00000356090 POGKQ9P215 609 aa17.12■□□□□ 0.33
NCDN-201ENST00000356090 TNNQ9UQP3 1299 aa17.12■□□□□ 0.33
NCDN-201ENST00000356090 SAFB2Q14151 953 aaKnown RBP eCLIP17.11■□□□□ 0.33
NCDN-201ENST00000356090 NUTM2DQ5VT03 806 aaPredicted RBP17.11■□□□□ 0.33
NCDN-201ENST00000356090 CGNL1Q0VF96 1302 aa17.1■□□□□ 0.33
NCDN-201ENST00000356090 TRPM1Q7Z4N2 1603 aa17.1■□□□□ 0.33
NCDN-201ENST00000356090 FTSJ3Q8IY81 847 aaKnown RBP17.09■□□□□ 0.33
NCDN-201ENST00000356090 WWC1Q8IX03 1113 aa17.08■□□□□ 0.32
NCDN-201ENST00000356090 NKTRP30414 1462 aaKnown RBP17.07■□□□□ 0.32
NCDN-201ENST00000356090 SAMD9LQ8IVG5 1584 aa17.07■□□□□ 0.32
NCDN-201ENST00000356090 U2AF1L5P0DN76 240 aaPredicted RBP17.07■□□□□ 0.32
NCDN-201ENST00000356090 U2AF1Q01081 240 aaKnown RBP eCLIP17.07■□□□□ 0.32
NCDN-201ENST00000356090 ADCY10Q96PN6 1610 aa17.07■□□□□ 0.32
NCDN-201ENST00000356090 EIF3AQ14152 1382 aaKnown RBP17.07■□□□□ 0.32
NCDN-201ENST00000356090 ZNF521Q96K83 1311 aa17.07■□□□□ 0.32
NCDN-201ENST00000356090 TCP11L2Q8N4U5 519 aa17.06■□□□□ 0.32
NCDN-201ENST00000356090 SLC12A5Q9H2X9 1139 aa17.06■□□□□ 0.32
NCDN-201ENST00000356090 U2SURPO15042 1029 aaKnown RBP17.06■□□□□ 0.32
NCDN-201ENST00000356090 MFAP1P55081 439 aaKnown RBP17.06■□□□□ 0.32
NCDN-201ENST00000356090 E9PCH4 1651 aa17.06■□□□□ 0.32
NCDN-201ENST00000356090 MAPK8IP3Q9UPT6 1336 aa17.06■□□□□ 0.32
NCDN-201ENST00000356090 CARD14Q9BXL6 1004 aa17.06■□□□□ 0.32
NCDN-201ENST00000356090 NUP160Q12769 1436 aa17.05■□□□□ 0.32
NCDN-201ENST00000356090 ABCA8O94911 1581 aa17.05■□□□□ 0.32
NCDN-201ENST00000356090 WDR7Q9Y4E6 1490 aa17.05■□□□□ 0.32
NCDN-201ENST00000356090 TMEM132EQ6IEE7 984 aa17.04■□□□□ 0.32
NCDN-201ENST00000356090 PDZRN3Q9UPQ7 1066 aa17.04■□□□□ 0.32
NCDN-201ENST00000356090 ADGRF5Q8IZF2 1346 aa17.03■□□□□ 0.32
NCDN-201ENST00000356090 PRDM15P57071 1507 aaPredicted RBP17.03■□□□□ 0.32
NCDN-201ENST00000356090 PDE3AQ14432 1141 aa17.03■□□□□ 0.32
NCDN-201ENST00000356090 PMFBP1Q8TBY8 1022 aa17.02■□□□□ 0.32
NCDN-201ENST00000356090 CFAP53Q96M91 514 aa17.02■□□□□ 0.32
NCDN-201ENST00000356090 RLBP1P12271 317 aa17.02■□□□□ 0.32
NCDN-201ENST00000356090 MTHFSP49914 203 aa17.02■□□□□ 0.32
NCDN-201ENST00000356090 PCDHB15Q9Y5E8 787 aa17.02■□□□□ 0.32
NCDN-201ENST00000356090 ASXL1Q8IXJ9 1541 aa17.02■□□□□ 0.31
NCDN-201ENST00000356090 KANK1Q14678 1352 aa17.01■□□□□ 0.31
NCDN-201ENST00000356090 RWDD1Q9H446 243 aaPredicted RBP17.01■□□□□ 0.31
NCDN-201ENST00000356090 SCAF11Q99590 1463 aaKnown RBP17■□□□□ 0.31
NCDN-201ENST00000356090 ARHGEF5Q12774 1597 aa17■□□□□ 0.31
NCDN-201ENST00000356090 ITPRIPQ8IWB1 547 aa17■□□□□ 0.31
NCDN-201ENST00000356090 TSR2Q969E8 191 aaKnown RBP17■□□□□ 0.31
NCDN-201ENST00000356090 RARSP54136 660 aaKnown RBP16.99■□□□□ 0.31
NCDN-201ENST00000356090 GGT6Q6P531 493 aa16.99■□□□□ 0.31
NCDN-201ENST00000356090 RUNDC1Q96C34 613 aa16.99■□□□□ 0.31
NCDN-201ENST00000356090 SMC4Q9NTJ3 1288 aa16.99■□□□□ 0.31
NCDN-201ENST00000356090 TRAPPC8Q9Y2L5 1435 aa16.98■□□□□ 0.31
NCDN-201ENST00000356090 INSRP06213 1382 aa16.97■□□□□ 0.31
NCDN-201ENST00000356090 HSP90AA1P07900 732 aaKnown RBP16.97■□□□□ 0.31
NCDN-201ENST00000356090 TRMT2AQ8IZ69 625 aaKnown RBP16.97■□□□□ 0.31
NCDN-201ENST00000356090 EIF2AK4Q9P2K8 1649 aaKnown RBP16.97■□□□□ 0.31
NCDN-201ENST00000356090 STK26Q9P289 416 aa16.96■□□□□ 0.31
NCDN-201ENST00000356090 PIK3C2GO75747 1445 aa16.96■□□□□ 0.31
NCDN-201ENST00000356090 TBC1D2Q9BYX2 928 aa16.96■□□□□ 0.31
NCDN-201ENST00000356090 USP19O94966 1318 aa16.95■□□□□ 0.3
NCDN-201ENST00000356090 MYH16Q9H6N6 1097 aa16.95■□□□□ 0.3
NCDN-201ENST00000356090 CDC42BPBQ9Y5S2 1711 aa16.94■□□□□ 0.3
NCDN-201ENST00000356090 NSD3Q9BZ95 1437 aa16.94■□□□□ 0.3
NCDN-201ENST00000356090 TTC37Q6PGP7 1564 aa16.94■□□□□ 0.3
NCDN-201ENST00000356090 FOXD4L1Q9NU39 408 aa16.94■□□□□ 0.3
NCDN-201ENST00000356090 DUOX2Q9NRD8 1548 aa16.93■□□□□ 0.3
NCDN-201ENST00000356090 ZKSCAN2Q63HK3 967 aa16.93■□□□□ 0.3
NCDN-201ENST00000356090 DZIP1LQ8IYY4 767 aaKnown RBP16.92■□□□□ 0.3
NCDN-201ENST00000356090 L1TD1Q5T7N2 865 aaKnown RBP16.92■□□□□ 0.3
NCDN-201ENST00000356090 GOLGA6L3A6NEY3 463 aa16.92■□□□□ 0.3
NCDN-201ENST00000356090 NAP1L5Q96NT1 182 aaPredicted RBP16.92■□□□□ 0.3
NCDN-201ENST00000356090 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.91■□□□□ 0.3
NCDN-201ENST00000356090 C22orf23Q9BZE7 217 aa16.91■□□□□ 0.3
NCDN-201ENST00000356090 SRPK2P78362 688 aaKnown RBP16.91■□□□□ 0.3
NCDN-201ENST00000356090 SCAPERQ9BY12 1400 aa16.91■□□□□ 0.3
NCDN-201ENST00000356090 PREX2Q70Z35 1606 aa16.91■□□□□ 0.3
NCDN-201ENST00000356090 EXOSC9Q06265 439 aaKnown RBP16.9■□□□□ 0.3
NCDN-201ENST00000356090 HSCBQ8IWL3 235 aa16.9■□□□□ 0.3
NCDN-201ENST00000356090 CABP2Q9NPB3 220 aa16.9■□□□□ 0.3
NCDN-201ENST00000356090 MYO5CQ9NQX4 1742 aa16.9■□□□□ 0.3
NCDN-201ENST00000356090 GGNBP2Q9H3C7 697 aa16.89■□□□□ 0.29
NCDN-201ENST00000356090 MAST1Q9Y2H9 1570 aa16.89■□□□□ 0.29
NCDN-201ENST00000356090 TBC1D32Q96NH3 1257 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 155.3 ms