RNA–Protein interactions for RNA: ENST00000349496.9

CTNNB1-201, Transcript of catenin beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNNB1, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-201ENST00000349496 SUPT6HQ7KZ85 1726 aaKnown RBP15.38■□□□□ 0.05
CTNNB1-201ENST00000349496 IQGAP2Q13576 1575 aa15.38■□□□□ 0.05
CTNNB1-201ENST00000349496 ABCC5O15440 1437 aa15.38■□□□□ 0.05
CTNNB1-201ENST00000349496 AKNAQ7Z591 1439 aa15.38■□□□□ 0.05
CTNNB1-201ENST00000349496 ZSCAN20P17040 1043 aaPredicted RBP15.38■□□□□ 0.05
CTNNB1-201ENST00000349496 ERBB4Q15303 1308 aa15.38■□□□□ 0.05
CTNNB1-201ENST00000349496 KIF7Q2M1P5 1343 aa15.38■□□□□ 0.05
CTNNB1-201ENST00000349496 KDM5BQ9UGL1 1544 aa15.38■□□□□ 0.05
CTNNB1-201ENST00000349496 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.37■□□□□ 0.059e-12■■□□□ 14.1
CTNNB1-201ENST00000349496 EHBP1L1Q8N3D4 1523 aa15.37■□□□□ 0.05
CTNNB1-201ENST00000349496 OFD1O75665 1012 aa15.37■□□□□ 0.05
CTNNB1-201ENST00000349496 SPDYE4A6NLX3 237 aa15.37■□□□□ 0.05
CTNNB1-201ENST00000349496 TMED8Q6PL24 325 aaPredicted RBP15.37■□□□□ 0.05
CTNNB1-201ENST00000349496 SENP3Q9H4L4 574 aaPredicted RBP15.36■□□□□ 0.05
CTNNB1-201ENST00000349496 PRKRIP1Q9H875 184 aaPredicted RBP15.36■□□□□ 0.05
CTNNB1-201ENST00000349496 ZSCAN30Q86W11 494 aa15.36■□□□□ 0.05
CTNNB1-201ENST00000349496 NUDCQ9Y266 331 aa15.35■□□□□ 0.05
CTNNB1-201ENST00000349496 NUP153P49790 1475 aaKnown RBP15.35■□□□□ 0.05
CTNNB1-201ENST00000349496 MRC2Q9UBG0 1479 aa15.35■□□□□ 0.05
CTNNB1-201ENST00000349496 ZBED9Q6R2W3 1325 aa15.35■□□□□ 0.05
CTNNB1-201ENST00000349496 CHRM1P11229 460 aaPredicted RBP15.35■□□□□ 0.05
CTNNB1-201ENST00000349496 CCDC66A2RUB6 948 aa15.35■□□□□ 0.05
CTNNB1-201ENST00000349496 DAPK1P53355 1430 aa15.35■□□□□ 0.05
CTNNB1-201ENST00000349496 UPF2Q9HAU5 1272 aaKnown RBP15.34■□□□□ 0.05
CTNNB1-201ENST00000349496 DYNC1I1O14576 645 aa15.34■□□□□ 0.05
CTNNB1-201ENST00000349496 NGEFQ8N5V2 710 aa15.34■□□□□ 0.05
CTNNB1-201ENST00000349496 ZNF622Q969S3 477 aaKnown RBP eCLIP15.34■□□□□ 0.05
CTNNB1-201ENST00000349496 XPCQ01831 940 aaPredicted RBP15.33■□□□□ 0.05
CTNNB1-201ENST00000349496 DISP1Q96F81 1524 aa15.33■□□□□ 0.05
CTNNB1-201ENST00000349496 TRAK2O60296 914 aa15.33■□□□□ 0.04
CTNNB1-201ENST00000349496 PLEKHD1A6NEE1 506 aa15.33■□□□□ 0.04
CTNNB1-201ENST00000349496 ANKRD30BQ9BXX2 1392 aa15.32■□□□□ 0.04
CTNNB1-201ENST00000349496 CCDC7Q96M83 1385 aa15.31■□□□□ 0.04
CTNNB1-201ENST00000349496 OS9Q13438 667 aaPredicted RBP15.31■□□□□ 0.04
CTNNB1-201ENST00000349496 AXDND1Q5T1B0 1012 aaPredicted RBP15.31■□□□□ 0.04
CTNNB1-201ENST00000349496 NUP155O75694 1391 aa15.3■□□□□ 0.04
CTNNB1-201ENST00000349496 IRX5P78411 483 aaPredicted RBP15.3■□□□□ 0.04
CTNNB1-201ENST00000349496 WDR62O43379 1518 aa15.29■□□□□ 0.04
CTNNB1-201ENST00000349496 ADAMTS12P58397 1594 aa15.29■□□□□ 0.04
CTNNB1-201ENST00000349496 PLCD4Q9BRC7 762 aa15.29■□□□□ 0.04
CTNNB1-201ENST00000349496 BANK1Q8NDB2 785 aa15.29■□□□□ 0.04
CTNNB1-201ENST00000349496 CARD11Q9BXL7 1154 aa15.29■□□□□ 0.04
CTNNB1-201ENST00000349496 TNNT1P13805 278 aa15.28■□□□□ 0.04
CTNNB1-201ENST00000349496 FAM161AQ3B820 660 aa15.28■□□□□ 0.04
CTNNB1-201ENST00000349496 ST20-MTHFSA0A0A6YYL1 179 aa15.28■□□□□ 0.04
CTNNB1-201ENST00000349496 PBRM1Q86U86 1689 aa15.28■□□□□ 0.04
CTNNB1-201ENST00000349496 LMOD3Q0VAK6 560 aa15.28■□□□□ 0.04
CTNNB1-201ENST00000349496 RALBP1Q15311 655 aa15.28■□□□□ 0.04
CTNNB1-201ENST00000349496 HECW1Q76N89 1606 aa15.28■□□□□ 0.04
CTNNB1-201ENST00000349496 CSPP1Q1MSJ5 1256 aa15.27■□□□□ 0.03
CTNNB1-201ENST00000349496 TIGD1Q96MW7 591 aa15.27■□□□□ 0.03
CTNNB1-201ENST00000349496 ERICH4A6NGS2 130 aa15.26■□□□□ 0.03
CTNNB1-201ENST00000349496 GRIN2AQ12879 1464 aa15.26■□□□□ 0.03
CTNNB1-201ENST00000349496 GPATCH11Q8N954 259 aa15.26■□□□□ 0.03
CTNNB1-201ENST00000349496 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.26■□□□□ 0.03
CTNNB1-201ENST00000349496 ARHGEF11O15085 1522 aa15.26■□□□□ 0.03
CTNNB1-201ENST00000349496 TSPY4P0CV99 314 aa15.25■□□□□ 0.03
CTNNB1-201ENST00000349496 TSPY10P0CW01 314 aa15.25■□□□□ 0.03
CTNNB1-201ENST00000349496 NBPF1Q3BBV0 1214 aa15.25■□□□□ 0.03
CTNNB1-201ENST00000349496 KIAA0586Q9BVV6 1533 aa15.24■□□□□ 0.03
CTNNB1-201ENST00000349496 NASPP49321 788 aaPredicted RBP15.24■□□□□ 0.03
CTNNB1-201ENST00000349496 TERF1P54274 439 aa15.24■□□□□ 0.03
CTNNB1-201ENST00000349496 CCDC173Q0VFZ6 552 aa15.24■□□□□ 0.03
CTNNB1-201ENST00000349496 SLC52A1Q9NWF4 448 aa15.24■□□□□ 0.03
CTNNB1-201ENST00000349496 MCM4P33991 863 aa15.23■□□□□ 0.03
CTNNB1-201ENST00000349496 KIF14Q15058 1648 aa15.23■□□□□ 0.03
CTNNB1-201ENST00000349496 TCOF1Q13428 1488 aaKnown RBP15.23■□□□□ 0.03
CTNNB1-201ENST00000349496 LOC102724159A0A0B4J2E5 919 aa15.22■□□□□ 0.03
CTNNB1-201ENST00000349496 PWP2Q15269 919 aaKnown RBP15.22■□□□□ 0.03
CTNNB1-201ENST00000349496 FAM43BQ6ZT52 329 aaPredicted RBP15.22■□□□□ 0.03
CTNNB1-201ENST00000349496 TPRNQ4KMQ1 711 aa15.22■□□□□ 0.03
CTNNB1-201ENST00000349496 CNTLNQ9NXG0 1405 aa15.22■□□□□ 0.03
CTNNB1-201ENST00000349496 USP47Q96K76 1375 aa15.22■□□□□ 0.03
CTNNB1-201ENST00000349496 SASS6Q6UVJ0 657 aa15.22■□□□□ 0.03
CTNNB1-201ENST00000349496 ZNF592Q92610 1267 aa15.22■□□□□ 0.03
CTNNB1-201ENST00000349496 EP400NLQ6ZTU2 488 aa15.21■□□□□ 0.03
CTNNB1-201ENST00000349496 CAMSAP2Q08AD1 1489 aa15.21■□□□□ 0.03
CTNNB1-201ENST00000349496 IFT140Q96RY7 1462 aa15.21■□□□□ 0.03
CTNNB1-201ENST00000349496 NCOA1Q15788 1441 aa15.21■□□□□ 0.03
CTNNB1-201ENST00000349496 KIF3AQ9Y496 699 aa15.21■□□□□ 0.03
CTNNB1-201ENST00000349496 GPATCH8Q9UKJ3 1502 aaKnown RBP15.21■□□□□ 0.03
CTNNB1-201ENST00000349496 MIA2Q96PC5 1412 aa15.21■□□□□ 0.03
CTNNB1-201ENST00000349496 GTF2A1P52655 376 aaPredicted RBP15.2■□□□□ 0.02
CTNNB1-201ENST00000349496 KIAA0556O60303 1618 aa15.2■□□□□ 0.02
CTNNB1-201ENST00000349496 FSD2A1L4K1 749 aa15.19■□□□□ 0.02
CTNNB1-201ENST00000349496 TSC1Q92574 1164 aa15.19■□□□□ 0.02
CTNNB1-201ENST00000349496 TMX1Q9H3N1 280 aa15.19■□□□□ 0.02
CTNNB1-201ENST00000349496 EIF4G3O43432 1585 aaKnown RBP15.19■□□□□ 0.02
CTNNB1-201ENST00000349496 TROQ12816 1431 aaPredicted RBP15.19■□□□□ 0.02
CTNNB1-201ENST00000349496 PZPP20742 1482 aa15.18■□□□□ 0.02
CTNNB1-201ENST00000349496 PDCL2Q8N4E4 241 aa15.18■□□□□ 0.02
CTNNB1-201ENST00000349496 RBM25P49756 843 aaKnown RBP15.18■□□□□ 0.02
CTNNB1-201ENST00000349496 RRP1P56182 461 aaKnown RBP15.18■□□□□ 0.02
CTNNB1-201ENST00000349496 ANKRD50Q9ULJ7 1429 aa15.18■□□□□ 0.02
CTNNB1-201ENST00000349496 RPRD2Q5VT52 1461 aaKnown RBP15.18■□□□□ 0.02
CTNNB1-201ENST00000349496 TAOK2Q9UL54 1235 aa15.17■□□□□ 0.02
CTNNB1-201ENST00000349496 VGFO15240 615 aaPredicted RBP15.17■□□□□ 0.02
CTNNB1-201ENST00000349496 TOMM22Q9NS69 142 aa15.17■□□□□ 0.02
CTNNB1-201ENST00000349496 CEP170Q5SW79 1584 aa15.17■□□□□ 0.02
CTNNB1-201ENST00000349496 FAM177BA6PVY3 158 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms