RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 NGEFQ8N5V2 710 aa19.24■□□□□ 0.67
SRPK1-201ENST00000346162 NRDCO43847 1150 aa19.24■□□□□ 0.67
SRPK1-201ENST00000346162 LMOD3Q0VAK6 560 aa19.24■□□□□ 0.67
SRPK1-201ENST00000346162 C9orf84Q5VXU9 1444 aa19.23■□□□□ 0.67
SRPK1-201ENST00000346162 COG6Q9Y2V7 657 aa19.23■□□□□ 0.67
SRPK1-201ENST00000346162 DDX49Q9Y6V7 483 aaKnown RBP19.23■□□□□ 0.67
SRPK1-201ENST00000346162 MCCP23508 829 aa19.23■□□□□ 0.67
SRPK1-201ENST00000346162 PDE4CQ08493 712 aa19.22■□□□□ 0.67
SRPK1-201ENST00000346162 CYB5RLQ6IPT4 315 aa19.22■□□□□ 0.67
SRPK1-201ENST00000346162 EID1Q9Y6B2 187 aa19.22■□□□□ 0.67
SRPK1-201ENST00000346162 DAPK1P53355 1430 aa19.22■□□□□ 0.67
SRPK1-201ENST00000346162 NGDNQ8NEJ9 315 aaKnown RBP19.22■□□□□ 0.67
SRPK1-201ENST00000346162 SKOR2Q2VWA4 1001 aaPredicted RBP19.21■□□□□ 0.67
SRPK1-201ENST00000346162 STK31Q9BXU1 1019 aa19.21■□□□□ 0.67
SRPK1-201ENST00000346162 FOXD4L1Q9NU39 408 aa19.21■□□□□ 0.67
SRPK1-201ENST00000346162 HECW1Q76N89 1606 aa19.21■□□□□ 0.67
SRPK1-201ENST00000346162 EPRSP07814 1512 aaKnown RBP19.21■□□□□ 0.67
SRPK1-201ENST00000346162 ARHGAP5Q13017 1502 aa19.21■□□□□ 0.67
SRPK1-201ENST00000346162 CSPP1Q1MSJ5 1256 aa19.21■□□□□ 0.67
SRPK1-201ENST00000346162 PCF11O94913 1555 aaKnown RBP19.2■□□□□ 0.66
SRPK1-201ENST00000346162 SNAPC4Q5SXM2 1469 aa19.2■□□□□ 0.66
SRPK1-201ENST00000346162 FGD1P98174 961 aa19.2■□□□□ 0.66
SRPK1-201ENST00000346162 ZKSCAN2Q63HK3 967 aa19.19■□□□□ 0.66
SRPK1-201ENST00000346162 MAP3K1Q13233 1512 aa19.19■□□□□ 0.66
SRPK1-201ENST00000346162 ELL2O00472 640 aaPredicted RBP19.19■□□□□ 0.66
SRPK1-201ENST00000346162 ADAMTS8Q9UP79 889 aa19.18■□□□□ 0.66
SRPK1-201ENST00000346162 SUPT6HQ7KZ85 1726 aaKnown RBP19.18■□□□□ 0.66
SRPK1-201ENST00000346162 CDK13Q14004 1512 aaKnown RBP19.18■□□□□ 0.66
SRPK1-201ENST00000346162 CFAP70Q5T0N1 1121 aa19.18■□□□□ 0.66
SRPK1-201ENST00000346162 SYAP1Q96A49 352 aaPredicted RBP19.18■□□□□ 0.66
SRPK1-201ENST00000346162 BACH2Q9BYV9 841 aa19.17■□□□□ 0.66
SRPK1-201ENST00000346162 KIAA0586Q9BVV6 1533 aa19.17■□□□□ 0.66
SRPK1-201ENST00000346162 AMPHP49418 695 aa19.17■□□□□ 0.66
SRPK1-201ENST00000346162 CHMP5Q9NZZ3 219 aa19.17■□□□□ 0.66
SRPK1-201ENST00000346162 CCDC184Q52MB2 194 aa19.16■□□□□ 0.66
SRPK1-201ENST00000346162 ESPNB1AK53 854 aa19.16■□□□□ 0.66
SRPK1-201ENST00000346162 DNAJC5BQ9UF47 199 aa19.16■□□□□ 0.66
SRPK1-201ENST00000346162 SLC4A10Q6U841 1118 aa19.16■□□□□ 0.66
SRPK1-201ENST00000346162 KIAA1211Q6ZU35 1233 aa19.16■□□□□ 0.66
SRPK1-201ENST00000346162 COG3Q96JB2 828 aa19.15■□□□□ 0.66
SRPK1-201ENST00000346162 HMMRO75330 724 aa19.15■□□□□ 0.66
SRPK1-201ENST00000346162 TMEM132EQ6IEE7 984 aa19.15■□□□□ 0.66
SRPK1-201ENST00000346162 CDCA7LQ96GN5 454 aa19.15■□□□□ 0.66
SRPK1-201ENST00000346162 ROCK1Q13464 1354 aa19.14■□□□□ 0.66
SRPK1-201ENST00000346162 RUNDC1Q96C34 613 aa19.14■□□□□ 0.65
SRPK1-201ENST00000346162 CHMP4AQ9BY43 222 aa19.14■□□□□ 0.65
SRPK1-201ENST00000346162 PNISRQ8TF01 805 aaKnown RBP19.14■□□□□ 0.65
SRPK1-201ENST00000346162 DIAPH1O60610 1272 aaKnown RBP19.13■□□□□ 0.65
SRPK1-201ENST00000346162 PDCL3Q9H2J4 239 aa19.12■□□□□ 0.65
SRPK1-201ENST00000346162 TRAK2O60296 914 aa19.12■□□□□ 0.65
SRPK1-201ENST00000346162 GOLGA6L4A6NEF3 574 aa19.11■□□□□ 0.65
SRPK1-201ENST00000346162 PPP2R1AP30153 589 aa19.11■□□□□ 0.65
SRPK1-201ENST00000346162 LTV1Q96GA3 475 aaPredicted RBP19.11■□□□□ 0.65
SRPK1-201ENST00000346162 RIPK4P57078 832 aa19.09■□□□□ 0.65
SRPK1-201ENST00000346162 IQGAP2Q13576 1575 aa19.09■□□□□ 0.65
SRPK1-201ENST00000346162 NAP1L2Q9ULW6 460 aaPredicted RBP19.09■□□□□ 0.65
SRPK1-201ENST00000346162 BIVM-ERCC5R4GMW8 1640 aa19.09■□□□□ 0.65
SRPK1-201ENST00000346162 LAMC3Q9Y6N6 1575 aa19.08■□□□□ 0.65
SRPK1-201ENST00000346162 NASPP49321 788 aaPredicted RBP19.08■□□□□ 0.65
SRPK1-201ENST00000346162 ANKRD30BQ9BXX2 1392 aa19.08■□□□□ 0.64
SRPK1-201ENST00000346162 APPP05067 770 aa19.08■□□□□ 0.64
SRPK1-201ENST00000346162 CSB-PGBD3P0DP91 1061 aa19.08■□□□□ 0.64
SRPK1-201ENST00000346162 GGNBP2Q9H3C7 697 aa19.08■□□□□ 0.64
SRPK1-201ENST00000346162 CUL7Q14999 1698 aa19.07■□□□□ 0.64
SRPK1-201ENST00000346162 DZIP1LQ8IYY4 767 aaKnown RBP19.07■□□□□ 0.64
SRPK1-201ENST00000346162 C11orf95C9JLR9 678 aaPredicted RBP19.06■□□□□ 0.64
SRPK1-201ENST00000346162 PLEKHH2Q8IVE3 1493 aa19.06■□□□□ 0.64
SRPK1-201ENST00000346162 MTHFSP49914 203 aa19.06■□□□□ 0.64
SRPK1-201ENST00000346162 ANKRD45Q5TZF3 282 aa19.06■□□□□ 0.64
SRPK1-201ENST00000346162 CABP2Q9NPB3 220 aa19.06■□□□□ 0.64
SRPK1-201ENST00000346162 DDX19BQ9UMR2 479 aa19.06■□□□□ 0.64
SRPK1-201ENST00000346162 TAOK2Q9UL54 1235 aa19.06■□□□□ 0.64
SRPK1-201ENST00000346162 TRIM6-TRIM34B2RNG4 842 aa19.05■□□□□ 0.64
SRPK1-201ENST00000346162 FAM69CQ0P6D2 419 aa19.04■□□□□ 0.64
SRPK1-201ENST00000346162 ABCC5O15440 1437 aa19.04■□□□□ 0.64
SRPK1-201ENST00000346162 TCP11L2Q8N4U5 519 aa19.03■□□□□ 0.64
SRPK1-201ENST00000346162 AKNAQ7Z591 1439 aa19.02■□□□□ 0.64
SRPK1-201ENST00000346162 SCAPERQ9BY12 1400 aa19.02■□□□□ 0.64
SRPK1-201ENST00000346162 PTPN23Q9H3S7 1636 aa19.02■□□□□ 0.64
SRPK1-201ENST00000346162 HDAC5Q9UQL6 1122 aa19.02■□□□□ 0.64
SRPK1-201ENST00000346162 UNC13AQ9UPW8 1703 aa19.02■□□□□ 0.63
SRPK1-201ENST00000346162 PANK1Q8TE04 598 aa19.01■□□□□ 0.63
SRPK1-201ENST00000346162 PRDM10Q9NQV6 1147 aa19.01■□□□□ 0.63
SRPK1-201ENST00000346162 PHF14O94880 888 aa19.01■□□□□ 0.63
SRPK1-201ENST00000346162 MAPK8IP2Q13387 824 aaPredicted RBP19.01■□□□□ 0.63
SRPK1-201ENST00000346162 CCDC66A2RUB6 948 aa19.01■□□□□ 0.63
SRPK1-201ENST00000346162 GRPEL1Q9HAV7 217 aa19.01■□□□□ 0.63
SRPK1-201ENST00000346162 PLB1Q6P1J6 1458 aa19.01■□□□□ 0.63
SRPK1-201ENST00000346162 ZHX1Q9UKY1 873 aaPredicted RBP19.01■□□□□ 0.63
SRPK1-201ENST00000346162 URB2Q14146 1524 aaKnown RBP19■□□□□ 0.63
SRPK1-201ENST00000346162 SLC12A5Q9H2X9 1139 aa19■□□□□ 0.63
SRPK1-201ENST00000346162 BBXQ8WY36 941 aaPredicted RBP18.98■□□□□ 0.63
SRPK1-201ENST00000346162 ARHGEF11O15085 1522 aa18.98■□□□□ 0.63
SRPK1-201ENST00000346162 UQCRHLA0A096LP55 91 aa18.98■□□□□ 0.63
SRPK1-201ENST00000346162 UQCRHP07919 91 aa18.98■□□□□ 0.63
SRPK1-201ENST00000346162 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.98■□□□□ 0.63
SRPK1-201ENST00000346162 CCDC173Q0VFZ6 552 aa18.97■□□□□ 0.63
SRPK1-201ENST00000346162 MAGI1Q96QZ7 1491 aaPredicted RBP18.97■□□□□ 0.63
SRPK1-201ENST00000346162 ERBINQ96RT1 1412 aa18.97■□□□□ 0.63
SRPK1-201ENST00000346162 HMOX1P09601 288 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms