RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 IFT57Q9NWB7 429 aa21.32■■□□□ 1
SPAST-202ENST00000345662 CHMP4CQ96CF2 233 aa21.31■■□□□ 1
SPAST-202ENST00000345662 SMG6Q86US8 1419 aaKnown RBP21.31■■□□□ 1
SPAST-202ENST00000345662 HMGN5P82970 282 aaKnown RBP21.31■■□□□ 1
SPAST-202ENST00000345662 RBM10P98175 930 aaKnown RBP21.3■■□□□ 1
SPAST-202ENST00000345662 CAVIN1Q6NZI2 390 aaKnown RBP21.3■■□□□ 1
SPAST-202ENST00000345662 HOMER1Q86YM7 354 aa21.29■■□□□ 1
SPAST-202ENST00000345662 CREBRFQ8IUR6 639 aa21.29■■□□□ 1
SPAST-202ENST00000345662 RNF214Q8ND24 703 aa21.29■■□□□ 1
SPAST-202ENST00000345662 ARGLU1Q9NWB6 273 aaPredicted RBP21.29■■□□□ 1
SPAST-202ENST00000345662 GORABQ5T7V8 394 aa21.29■■□□□ 1
SPAST-202ENST00000345662 RUNDC1Q96C34 613 aa21.29■■□□□ 1
SPAST-202ENST00000345662 API5Q9BZZ5 524 aaKnown RBP21.29■■□□□ 1
SPAST-202ENST00000345662 KIF21BO75037 1637 aa21.28■■□□□ 1
SPAST-202ENST00000345662 GRPEL1Q9HAV7 217 aa21.28■■□□□ 1
SPAST-202ENST00000345662 TRAK1Q9UPV9 953 aa21.28■■□□□ 1
SPAST-202ENST00000345662 MBD3O95983 291 aa21.27■■□□□ 1
SPAST-202ENST00000345662 FGD6Q6ZV73 1430 aa21.27■■□□□ 1
SPAST-202ENST00000345662 CHMP3Q9Y3E7 222 aa21.27■■□□□ 1
SPAST-202ENST00000345662 CDC45O75419 566 aa21.27■□□□□ 0.99
SPAST-202ENST00000345662 ZKSCAN1P17029 563 aaPredicted RBP21.27■□□□□ 0.99
SPAST-202ENST00000345662 BICD2Q8TD16 824 aa21.27■□□□□ 0.99
SPAST-202ENST00000345662 RUFY2Q8WXA3 655 aa21.27■□□□□ 0.99
SPAST-202ENST00000345662 ANO2Q9NQ90 1003 aa21.27■□□□□ 0.99
SPAST-202ENST00000345662 CCDC66A2RUB6 948 aa21.26■□□□□ 0.99
SPAST-202ENST00000345662 ESPNB1AK53 854 aa21.26■□□□□ 0.99
SPAST-202ENST00000345662 ADAMTS8Q9UP79 889 aa21.25■□□□□ 0.99
SPAST-202ENST00000345662 KIF3BO15066 747 aa21.25■□□□□ 0.99
SPAST-202ENST00000345662 SASS6Q6UVJ0 657 aa21.25■□□□□ 0.99
SPAST-202ENST00000345662 SMC3Q9UQE7 1217 aa21.25■□□□□ 0.99
SPAST-202ENST00000345662 TPM1P09493 284 aa21.25■□□□□ 0.99
SPAST-202ENST00000345662 MIA2Q96PC5 1412 aa21.24■□□□□ 0.99
SPAST-202ENST00000345662 ERCC6Q03468 1493 aa21.24■□□□□ 0.99
SPAST-202ENST00000345662 TSR1Q2NL82 804 aaKnown RBP21.24■□□□□ 0.99
SPAST-202ENST00000345662 RASSF8Q8NHQ8 419 aa21.24■□□□□ 0.99
SPAST-202ENST00000345662 RRBP1Q9P2E9 1410 aaKnown RBP21.24■□□□□ 0.99
SPAST-202ENST00000345662 CCDC70Q6NSX1 233 aa21.23■□□□□ 0.99
SPAST-202ENST00000345662 ROCK1Q13464 1354 aa21.23■□□□□ 0.99
SPAST-202ENST00000345662 PDZRN3Q9UPQ7 1066 aa21.23■□□□□ 0.99
SPAST-202ENST00000345662 VPS37CA5D8V6 355 aaPredicted RBP21.22■□□□□ 0.99
SPAST-202ENST00000345662 NPHP1O15259 732 aa21.22■□□□□ 0.99
SPAST-202ENST00000345662 NOM1Q5C9Z4 860 aaKnown RBP21.22■□□□□ 0.99
SPAST-202ENST00000345662 MNS1Q8NEH6 495 aa21.22■□□□□ 0.99
SPAST-202ENST00000345662 PDE3AQ14432 1141 aa21.22■□□□□ 0.99
SPAST-202ENST00000345662 TPD52L1Q16890 204 aaPredicted RBP21.22■□□□□ 0.99
SPAST-202ENST00000345662 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.22■□□□□ 0.99
SPAST-202ENST00000345662 RIPK4P57078 832 aa21.21■□□□□ 0.99
SPAST-202ENST00000345662 TSPY26PQ9H489 355 aa21.2■□□□□ 0.98
SPAST-202ENST00000345662 LETM1O95202 739 aaPredicted RBP21.2■□□□□ 0.98
SPAST-202ENST00000345662 MCM4P33991 863 aa21.2■□□□□ 0.98
SPAST-202ENST00000345662 PNISRQ8TF01 805 aaKnown RBP21.19■□□□□ 0.98
SPAST-202ENST00000345662 PRPF40AO75400 957 aaKnown RBP21.19■□□□□ 0.98
SPAST-202ENST00000345662 LRRC9Q6ZRR7 1453 aa21.19■□□□□ 0.98
SPAST-202ENST00000345662 CLSTN1O94985 981 aa21.18■□□□□ 0.98
SPAST-202ENST00000345662 MYOM3Q5VTT5 1437 aa21.18■□□□□ 0.98
SPAST-202ENST00000345662 PES1O00541 588 aaKnown RBP21.18■□□□□ 0.98
SPAST-202ENST00000345662 EVC2Q86UK5 1308 aa21.17■□□□□ 0.98
SPAST-202ENST00000345662 RABEP1Q15276 862 aa21.16■□□□□ 0.98
SPAST-202ENST00000345662 PDS5BQ9NTI5 1447 aa21.16■□□□□ 0.98
SPAST-202ENST00000345662 DIAPH1O60610 1272 aaKnown RBP21.16■□□□□ 0.98
SPAST-202ENST00000345662 PODXL2Q9NZ53 605 aa21.16■□□□□ 0.98
SPAST-202ENST00000345662 UQCRHLA0A096LP55 91 aa21.15■□□□□ 0.98
SPAST-202ENST00000345662 UQCRHP07919 91 aa21.15■□□□□ 0.98
SPAST-202ENST00000345662 ACBD3Q9H3P7 528 aa21.15■□□□□ 0.98
SPAST-202ENST00000345662 CWC15Q9P013 229 aaKnown RBP21.15■□□□□ 0.98
SPAST-202ENST00000345662 RNF20Q5VTR2 975 aa21.14■□□□□ 0.98
SPAST-202ENST00000345662 CCDC184Q52MB2 194 aa21.14■□□□□ 0.97
SPAST-202ENST00000345662 TAF7LQ5H9L4 462 aa21.14■□□□□ 0.97
SPAST-202ENST00000345662 CCDC73Q6ZRK6 1079 aa21.14■□□□□ 0.97
SPAST-202ENST00000345662 CUX1P39880 1505 aa21.13■□□□□ 0.97
SPAST-202ENST00000345662 WASHC2CQ9Y4E1 1318 aa21.13■□□□□ 0.97
SPAST-202ENST00000345662 CADPSQ9ULU8 1353 aa21.13■□□□□ 0.97
SPAST-202ENST00000345662 HSP90B2PQ58FF3 399 aa21.13■□□□□ 0.97
SPAST-202ENST00000345662 SMARCA4P51532 1647 aa21.13■□□□□ 0.97
SPAST-202ENST00000345662 CIZ1Q9ULV3 898 aaPredicted RBP21.12■□□□□ 0.97
SPAST-202ENST00000345662 MCM2P49736 904 aa21.12■□□□□ 0.97
SPAST-202ENST00000345662 IPO7O95373 1038 aaKnown RBP21.12■□□□□ 0.97
SPAST-202ENST00000345662 AMPHP49418 695 aa21.12■□□□□ 0.97
SPAST-202ENST00000345662 NUTM2DQ5VT03 806 aaPredicted RBP21.12■□□□□ 0.97
SPAST-202ENST00000345662 TRIM5Q9C035 493 aa21.11■□□□□ 0.97
SPAST-202ENST00000345662 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.11■□□□□ 0.97
SPAST-202ENST00000345662 TOMM22Q9NS69 142 aa21.11■□□□□ 0.97
SPAST-202ENST00000345662 CPLX2Q6PUV4 134 aaKnown RBP21.11■□□□□ 0.97
SPAST-202ENST00000345662 GNAI1P63096 354 aa21.1■□□□□ 0.97
SPAST-202ENST00000345662 ZSCAN30Q86W11 494 aa21.1■□□□□ 0.97
SPAST-202ENST00000345662 CWC22Q9HCG8 908 aaKnown RBP21.1■□□□□ 0.97
SPAST-202ENST00000345662 MLECQ14165 292 aa21.1■□□□□ 0.97
SPAST-202ENST00000345662 NINLQ9Y2I6 1382 aa21.1■□□□□ 0.97
SPAST-202ENST00000345662 BCL11BQ9C0K0 894 aaPredicted RBP21.09■□□□□ 0.97
SPAST-202ENST00000345662 ZNF330Q9Y3S2 320 aaPredicted RBP21.09■□□□□ 0.97
SPAST-202ENST00000345662 K7ELQ4 463 aaPredicted RBP21.09■□□□□ 0.97
SPAST-202ENST00000345662 ATAD2BQ9ULI0 1458 aa21.09■□□□□ 0.97
SPAST-202ENST00000345662 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.08■□□□□ 0.97
SPAST-202ENST00000345662 PPP2R1AP30153 589 aa21.08■□□□□ 0.97
SPAST-202ENST00000345662 NAT10Q9H0A0 1025 aaKnown RBP21.08■□□□□ 0.97
SPAST-202ENST00000345662 BCAR3O75815 825 aa21.08■□□□□ 0.96
SPAST-202ENST00000345662 IFIT2P09913 472 aaKnown RBP21.08■□□□□ 0.96
SPAST-202ENST00000345662 NEK4P51957 841 aa21.08■□□□□ 0.96
SPAST-202ENST00000345662 HOOK1Q9UJC3 728 aaKnown RBP21.08■□□□□ 0.96
SPAST-202ENST00000345662 UBE2Q2Q8WVN8 375 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms