RNA–Protein interactions for RNA: ENST00000344140.5

CACNB1-201, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene CACNB1, Length 1,889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-201ENST00000344140 DDX10Q13206 875 aaKnown RBP30.84■■■□□ 2.53
CACNB1-201ENST00000344140 KIAA1210Q9ULL0 1709 aa30.83■■■□□ 2.53
CACNB1-201ENST00000344140 PPLO60437 1756 aa30.82■■■□□ 2.52
CACNB1-201ENST00000344140 WASHC2AQ641Q2 1341 aa30.82■■■□□ 2.52
CACNB1-201ENST00000344140 ADGRF5Q8IZF2 1346 aa30.82■■■□□ 2.52
CACNB1-201ENST00000344140 C3P01024 1663 aa30.82■■■□□ 2.52
CACNB1-201ENST00000344140 PLPPR3Q6T4P5 718 aa30.8■■■□□ 2.52
CACNB1-201ENST00000344140 TMEM131LA2VDJ0 1609 aa30.8■■■□□ 2.52
CACNB1-201ENST00000344140 CCDC7Q96M83 1385 aa30.78■■■□□ 2.52
CACNB1-201ENST00000344140 CEBPAP49715 358 aaPredicted RBP30.78■■■□□ 2.52
CACNB1-201ENST00000344140 VGFO15240 615 aaPredicted RBP30.77■■■□□ 2.52
CACNB1-201ENST00000344140 ST20-MTHFSA0A0A6YYL1 179 aa30.76■■■□□ 2.52
CACNB1-201ENST00000344140 NEXMIFQ5QGS0 1516 aa30.76■■■□□ 2.52
CACNB1-201ENST00000344140 MIER1Q8N108 512 aa30.76■■■□□ 2.51
CACNB1-201ENST00000344140 PIK3C2GO75747 1445 aa30.74■■■□□ 2.51
CACNB1-201ENST00000344140 ZFYVE9O95405 1425 aa30.74■■■□□ 2.51
CACNB1-201ENST00000344140 KDM4FA0A1W2PPD8 638 aa30.74■■■□□ 2.51
CACNB1-201ENST00000344140 C11orf95C9JLR9 678 aaPredicted RBP30.74■■■□□ 2.51
CACNB1-201ENST00000344140 STAG3Q9UJ98 1225 aa30.74■■■□□ 2.51
CACNB1-201ENST00000344140 PTPRMP28827 1452 aa30.74■■■□□ 2.51
CACNB1-201ENST00000344140 POLR1AO95602 1720 aaPredicted RBP30.73■■■□□ 2.51
CACNB1-201ENST00000344140 TNRQ92752 1358 aa30.72■■■□□ 2.51
CACNB1-201ENST00000344140 KIF7Q2M1P5 1343 aa30.71■■■□□ 2.51
CACNB1-201ENST00000344140 CFAP70Q5T0N1 1121 aa30.71■■■□□ 2.51
CACNB1-201ENST00000344140 SCAF11Q99590 1463 aaKnown RBP30.7■■■□□ 2.51
CACNB1-201ENST00000344140 C14orf93Q9H972 538 aaKnown RBP30.68■■■□□ 2.5
CACNB1-201ENST00000344140 MYO5BQ9ULV0 1848 aa30.68■■■□□ 2.5
CACNB1-201ENST00000344140 A2ML1A8K2U0 1454 aa30.67■■■□□ 2.5
CACNB1-201ENST00000344140 IQGAP1P46940 1657 aa30.67■■■□□ 2.5
CACNB1-201ENST00000344140 SETBP1Q9Y6X0 1596 aa30.66■■■□□ 2.5
CACNB1-201ENST00000344140 EIF3AQ14152 1382 aaKnown RBP30.64■■■□□ 2.5
CACNB1-201ENST00000344140 NLRP1Q9C000 1473 aa30.6■■■□□ 2.49
CACNB1-201ENST00000344140 NUTM2DQ5VT03 806 aaPredicted RBP30.6■■■□□ 2.49
CACNB1-201ENST00000344140 KDM5AP29375 1690 aaKnown RBP30.6■■■□□ 2.49
CACNB1-201ENST00000344140 TESK2Q96S53 571 aa30.59■■■□□ 2.49
CACNB1-201ENST00000344140 RIMS2Q9UQ26 1411 aa30.56■■■□□ 2.48
CACNB1-201ENST00000344140 ADGRB1O14514 1584 aa30.55■■■□□ 2.48
CACNB1-201ENST00000344140 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.54■■■□□ 2.48
CACNB1-201ENST00000344140 ANP32CO43423 234 aa30.53■■■□□ 2.48
CACNB1-201ENST00000344140 SLC24A1O60721 1099 aa30.53■■■□□ 2.48
CACNB1-201ENST00000344140 HDGFP51858 240 aaKnown RBP30.53■■■□□ 2.48
CACNB1-201ENST00000344140 TMF1P82094 1093 aa30.53■■■□□ 2.48
CACNB1-201ENST00000344140 MYO3AQ8NEV4 1616 aa30.53■■■□□ 2.48
CACNB1-201ENST00000344140 SETD1BQ9UPS6 1966 aaKnown RBP30.53■■■□□ 2.48
CACNB1-201ENST00000344140 POLR3GLQ9BT43 218 aa30.5■■■□□ 2.47
CACNB1-201ENST00000344140 UBR1Q8IWV7 1749 aa30.49■■■□□ 2.47
CACNB1-201ENST00000344140 TMEM132EQ6IEE7 984 aa30.46■■■□□ 2.47
CACNB1-201ENST00000344140 DISP3Q9P2K9 1392 aa30.46■■■□□ 2.47
CACNB1-201ENST00000344140 TMEM2Q9UHN6 1383 aa30.46■■■□□ 2.47
CACNB1-201ENST00000344140 CDCA8Q53HL2 280 aa30.45■■■□□ 2.47
CACNB1-201ENST00000344140 CEP170BQ9Y4F5 1589 aaPredicted RBP30.44■■■□□ 2.46
CACNB1-201ENST00000344140 SBNO2Q9Y2G9 1366 aa30.43■■■□□ 2.46
CACNB1-201ENST00000344140 ALKQ9UM73 1620 aa30.42■■■□□ 2.46
CACNB1-201ENST00000344140 TRAK1Q9UPV9 953 aa30.42■■■□□ 2.46
CACNB1-201ENST00000344140 CENPJQ9HC77 1338 aaPredicted RBP30.41■■■□□ 2.46
CACNB1-201ENST00000344140 ZNF142P52746 1687 aaPredicted RBP30.41■■■□□ 2.46
CACNB1-201ENST00000344140 ASXL1Q8IXJ9 1541 aa30.38■■■□□ 2.45
CACNB1-201ENST00000344140 CCER2I3L3R5 266 aa30.36■■■□□ 2.45
CACNB1-201ENST00000344140 THEMISQ8N1K5 641 aaPredicted RBP30.35■■■□□ 2.45
CACNB1-201ENST00000344140 YTHDC2Q9H6S0 1430 aaKnown RBP30.34■■■□□ 2.45
CACNB1-201ENST00000344140 SLIT1O75093 1534 aa30.33■■■□□ 2.45
CACNB1-201ENST00000344140 SENP3Q9H4L4 574 aaPredicted RBP30.32■■■□□ 2.44
CACNB1-201ENST00000344140 EID1Q9Y6B2 187 aa30.31■■■□□ 2.44
CACNB1-201ENST00000344140 ARHGAP23Q9P227 1491 aa30.31■■■□□ 2.44
CACNB1-201ENST00000344140 ARHGEF28Q8N1W1 1705 aaKnown RBP30.31■■■□□ 2.44
CACNB1-201ENST00000344140 NRXN3Q9Y4C0 1643 aa30.29■■■□□ 2.44
CACNB1-201ENST00000344140 QRICH2Q9H0J4 1663 aa30.29■■■□□ 2.44
CACNB1-201ENST00000344140 PLEKHG1Q9ULL1 1385 aa30.29■■■□□ 2.44
CACNB1-201ENST00000344140 SETD1AO15047 1707 aaKnown RBP30.28■■■□□ 2.44
CACNB1-201ENST00000344140 TXNDC2Q86VQ3 553 aa30.28■■■□□ 2.44
CACNB1-201ENST00000344140 STK26Q9P289 416 aa30.28■■■□□ 2.44
CACNB1-201ENST00000344140 PRKRIP1Q9H875 184 aaPredicted RBP30.27■■■□□ 2.44
CACNB1-201ENST00000344140 LRPPRCP42704 1394 aaKnown RBP30.26■■■□□ 2.43
CACNB1-201ENST00000344140 LTKP29376 864 aa30.25■■■□□ 2.43
CACNB1-201ENST00000344140 BCANQ96GW7 911 aa30.24■■■□□ 2.43
CACNB1-201ENST00000344140 LMTK3Q96Q04 1460 aa30.23■■■□□ 2.43
CACNB1-201ENST00000344140 DLC1Q96QB1 1528 aa30.23■■■□□ 2.43
CACNB1-201ENST00000344140 ABCC11Q96J66 1382 aa30.22■■■□□ 2.43
CACNB1-201ENST00000344140 PUS7Q96PZ0 661 aaKnown RBP30.2■■■□□ 2.42
CACNB1-201ENST00000344140 PANK3Q9H999 370 aa30.19■■■□□ 2.42
CACNB1-201ENST00000344140 POGKQ9P215 609 aa30.19■■■□□ 2.42
CACNB1-201ENST00000344140 METP08581 1390 aa30.19■■■□□ 2.42
CACNB1-201ENST00000344140 ADAMTS13Q76LX8 1427 aa30.19■■■□□ 2.42
CACNB1-201ENST00000344140 AEBP2Q6ZN18 517 aaPredicted RBP30.19■■■□□ 2.42
CACNB1-201ENST00000344140 EVC2Q86UK5 1308 aa30.18■■■□□ 2.42
CACNB1-201ENST00000344140 PRAM1Q96QH2 718 aa30.18■■■□□ 2.42
CACNB1-201ENST00000344140 PER1O15534 1290 aaPredicted RBP30.16■■■□□ 2.42
CACNB1-201ENST00000344140 KTN1Q86UP2 1357 aaKnown RBP30.15■■■□□ 2.42
CACNB1-201ENST00000344140 HSPA2P54652 639 aa30.15■■■□□ 2.42
CACNB1-201ENST00000344140 ANKLE2Q86XL3 938 aa30.14■■■□□ 2.42
CACNB1-201ENST00000344140 MED14O60244 1454 aa30.14■■■□□ 2.42
CACNB1-201ENST00000344140 SIRT1Q96EB6 747 aa30.14■■■□□ 2.42
CACNB1-201ENST00000344140 YTHDC1Q96MU7 727 aaKnown RBP30.13■■■□□ 2.41
CACNB1-201ENST00000344140 TECPR2O15040 1411 aa30.13■■■□□ 2.41
CACNB1-201ENST00000344140 MYOM1P52179 1685 aa30.13■■■□□ 2.41
CACNB1-201ENST00000344140 SAFB2Q14151 953 aaKnown RBP eCLIP30.12■■■□□ 2.41
CACNB1-201ENST00000344140 TULP4Q9NRJ4 1543 aa30.11■■■□□ 2.41
CACNB1-201ENST00000344140 TBX22Q9Y458 520 aa30.1■■■□□ 2.41
CACNB1-201ENST00000344140 KNDC1Q76NI1 1749 aa30.1■■■□□ 2.41
CACNB1-201ENST00000344140 FAM135BQ49AJ0 1406 aa30.09■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms