RNA–Protein interactions for RNA: ENST00000343380.5

E2F1-201, Transcript of E2F transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene E2F1, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E2F1-201ENST00000343380 DDRGK1Q96HY6 314 aa27.53■■■□□ 2
E2F1-201ENST00000343380 SLFN5Q08AF3 891 aa27.52■■■□□ 2
E2F1-201ENST00000343380 C8orf34Q49A92 452 aa27.51■■■□□ 2
E2F1-201ENST00000343380 IQGAP1P46940 1657 aa27.51■■□□□ 1.99
E2F1-201ENST00000343380 CLASP1Q7Z460 1538 aa27.49■■□□□ 1.99
E2F1-201ENST00000343380 TRAPPC8Q9Y2L5 1435 aa27.48■■□□□ 1.99
E2F1-201ENST00000343380 ERCC6L2Q5T890 1561 aa27.48■■□□□ 1.99
E2F1-201ENST00000343380 ASXL1Q8IXJ9 1541 aa27.47■■□□□ 1.99
E2F1-201ENST00000343380 FAM161AQ3B820 660 aa27.46■■□□□ 1.99
E2F1-201ENST00000343380 SHROOM2Q13796 1616 aa27.46■■□□□ 1.99
E2F1-201ENST00000343380 APAF1O14727 1248 aa27.46■■□□□ 1.99
E2F1-201ENST00000343380 RGS3P49796 1198 aa27.46■■□□□ 1.99
E2F1-201ENST00000343380 TRMT2AQ8IZ69 625 aaKnown RBP27.46■■□□□ 1.99
E2F1-201ENST00000343380 SCAF11Q99590 1463 aaKnown RBP27.46■■□□□ 1.99
E2F1-201ENST00000343380 BCAR3O75815 825 aa27.45■■□□□ 1.98
E2F1-201ENST00000343380 RTN4Q9NQC3 1192 aaKnown RBP27.45■■□□□ 1.98
E2F1-201ENST00000343380 SYNMO15061 1565 aa27.45■■□□□ 1.98
E2F1-201ENST00000343380 PIK3C2GO75747 1445 aa27.45■■□□□ 1.98
E2F1-201ENST00000343380 NFKBIBQ15653 356 aa27.44■■□□□ 1.98
E2F1-201ENST00000343380 DMRT2Q9Y5R5 561 aa27.44■■□□□ 1.98
E2F1-201ENST00000343380 PLCH2O75038 1416 aa27.43■■□□□ 1.98
E2F1-201ENST00000343380 CDCA8Q53HL2 280 aa27.42■■□□□ 1.98
E2F1-201ENST00000343380 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.42■■□□□ 1.98
E2F1-201ENST00000343380 EFCAB2Q5VUJ9 269 aa27.42■■□□□ 1.98
E2F1-201ENST00000343380 ABCC2Q92887 1545 aa27.41■■□□□ 1.98
E2F1-201ENST00000343380 MYOM1P52179 1685 aa27.41■■□□□ 1.98
E2F1-201ENST00000343380 AFAP1Q8N556 730 aa27.4■■□□□ 1.98
E2F1-201ENST00000343380 SCAPERQ9BY12 1400 aa27.39■■□□□ 1.97
E2F1-201ENST00000343380 TRPM2O94759 1503 aa27.38■■□□□ 1.97
E2F1-201ENST00000343380 SPHKAPQ2M3C7 1700 aa27.38■■□□□ 1.97
E2F1-201ENST00000343380 CLTCL1P53675 1640 aa27.37■■□□□ 1.97
E2F1-201ENST00000343380 ABCC1P33527 1531 aa27.37■■□□□ 1.97
E2F1-201ENST00000343380 NPC1L1Q9UHC9 1359 aa27.36■■□□□ 1.97
E2F1-201ENST00000343380 CARD14Q9BXL6 1004 aa27.36■■□□□ 1.97
E2F1-201ENST00000343380 PTPRTO14522 1441 aa27.36■■□□□ 1.97
E2F1-201ENST00000343380 NKTRP30414 1462 aaKnown RBP27.35■■□□□ 1.97
E2F1-201ENST00000343380 SPAG9O60271 1321 aaKnown RBP27.35■■□□□ 1.97
E2F1-201ENST00000343380 IGHDP01880 384 aa27.34■■□□□ 1.97
E2F1-201ENST00000343380 DAXXQ9UER7 740 aaPredicted RBP27.34■■□□□ 1.97
E2F1-201ENST00000343380 GSE1Q14687 1217 aa27.33■■□□□ 1.97
E2F1-201ENST00000343380 CFAP70Q5T0N1 1121 aa27.33■■□□□ 1.97
E2F1-201ENST00000343380 EIF3AQ14152 1382 aaKnown RBP27.32■■□□□ 1.96
E2F1-201ENST00000343380 CEP152O94986 1710 aa27.31■■□□□ 1.96
E2F1-201ENST00000343380 ANO8Q9HCE9 1232 aaPredicted RBP27.3■■□□□ 1.96
E2F1-201ENST00000343380 E9PSI1 815 aa27.29■■□□□ 1.96
E2F1-201ENST00000343380 OSCARQ8IYS5 282 aa27.29■■□□□ 1.96
E2F1-201ENST00000343380 BRPF3Q9ULD4 1205 aa27.29■■□□□ 1.96
E2F1-201ENST00000343380 FRAT1Q92837 279 aaPredicted RBP27.28■■□□□ 1.96
E2F1-201ENST00000343380 ERVK-7P63135 1459 aa27.28■■□□□ 1.96
E2F1-201ENST00000343380 ADGRF5Q8IZF2 1346 aa27.27■■□□□ 1.96
E2F1-201ENST00000343380 STAC3Q96MF2 364 aa27.27■■□□□ 1.96
E2F1-201ENST00000343380 KDM5AP29375 1690 aaKnown RBP27.26■■□□□ 1.95
E2F1-201ENST00000343380 FRAT2O75474 233 aaPredicted RBP27.25■■□□□ 1.95
E2F1-201ENST00000343380 PANK1Q8TE04 598 aa27.25■■□□□ 1.95
E2F1-201ENST00000343380 ZFYVE16Q7Z3T8 1539 aa27.25■■□□□ 1.95
E2F1-201ENST00000343380 ZCCHC11Q5TAX3 1644 aaKnown RBP27.25■■□□□ 1.95
E2F1-201ENST00000343380 USP19O94966 1318 aa27.24■■□□□ 1.95
E2F1-201ENST00000343380 UGGT1Q9NYU2 1555 aa27.24■■□□□ 1.95
E2F1-201ENST00000343380 COG6Q9Y2V7 657 aa27.23■■□□□ 1.95
E2F1-201ENST00000343380 SEC24BO95487 1268 aa27.22■■□□□ 1.95
E2F1-201ENST00000343380 WWC1Q8IX03 1113 aa27.22■■□□□ 1.95
E2F1-201ENST00000343380 RTEL1-TNFRSF6BF6WH68 1400 aa27.21■■□□□ 1.95
E2F1-201ENST00000343380 KIF3BO15066 747 aa27.2■■□□□ 1.95
E2F1-201ENST00000343380 CENPJQ9HC77 1338 aaPredicted RBP27.19■■□□□ 1.94
E2F1-201ENST00000343380 DEPDC5O75140 1603 aa27.19■■□□□ 1.94
E2F1-201ENST00000343380 TET3O43151 1660 aa27.18■■□□□ 1.94
E2F1-201ENST00000343380 NEUROD2Q15784 382 aa27.18■■□□□ 1.94
E2F1-201ENST00000343380 PDE3AQ14432 1141 aa27.18■■□□□ 1.94
E2F1-201ENST00000343380 CLUAP1Q96AJ1 413 aa27.18■■□□□ 1.94
E2F1-201ENST00000343380 RRP7AQ9Y3A4 280 aaKnown RBP27.18■■□□□ 1.94
E2F1-201ENST00000343380 TNNT2P45379 298 aaPredicted RBP27.17■■□□□ 1.94
E2F1-201ENST00000343380 ABCA6Q8N139 1617 aa27.17■■□□□ 1.94
E2F1-201ENST00000343380 CGNL1Q0VF96 1302 aa27.17■■□□□ 1.94
E2F1-201ENST00000343380 KIAA1210Q9ULL0 1709 aa27.15■■□□□ 1.94
E2F1-201ENST00000343380 CANXP27824 592 aaKnown RBP27.14■■□□□ 1.94
E2F1-201ENST00000343380 TNNQ9UQP3 1299 aa27.14■■□□□ 1.94
E2F1-201ENST00000343380 MAP3K4Q9Y6R4 1608 aa27.14■■□□□ 1.93
E2F1-201ENST00000343380 KANK1Q14678 1352 aa27.13■■□□□ 1.93
E2F1-201ENST00000343380 VWDEQ8N2E2 1590 aa27.13■■□□□ 1.93
E2F1-201ENST00000343380 POLR3AO14802 1390 aaPredicted RBP27.12■■□□□ 1.93
E2F1-201ENST00000343380 RLBP1P12271 317 aa27.1■■□□□ 1.93
E2F1-201ENST00000343380 NGEFQ8N5V2 710 aa27.1■■□□□ 1.93
E2F1-201ENST00000343380 MYOM2P54296 1465 aa27.09■■□□□ 1.93
E2F1-201ENST00000343380 RARSP54136 660 aaKnown RBP27.09■■□□□ 1.93
E2F1-201ENST00000343380 SLC12A5Q9H2X9 1139 aa27.09■■□□□ 1.93
E2F1-201ENST00000343380 ATP7AQ04656 1500 aa27.08■■□□□ 1.93
E2F1-201ENST00000343380 BCL2L13Q9BXK5 485 aa27.08■■□□□ 1.93
E2F1-201ENST00000343380 PCDHB15Q9Y5E8 787 aa27.08■■□□□ 1.92
E2F1-201ENST00000343380 NSD3Q9BZ95 1437 aa27.07■■□□□ 1.92
E2F1-201ENST00000343380 UHRF1BP1LA0JNW5 1464 aa27.07■■□□□ 1.92
E2F1-201ENST00000343380 MORC1Q86VD1 984 aa27.07■■□□□ 1.92
E2F1-201ENST00000343380 TCP11L2Q8N4U5 519 aa27.07■■□□□ 1.92
E2F1-201ENST00000343380 MAPK8IP3Q9UPT6 1336 aa27.05■■□□□ 1.92
E2F1-201ENST00000343380 MROH1Q8NDA8 1641 aa27.05■■□□□ 1.92
E2F1-201ENST00000343380 SLC24A1O60721 1099 aa27.05■■□□□ 1.92
E2F1-201ENST00000343380 TRAK1Q9UPV9 953 aa27.05■■□□□ 1.92
E2F1-201ENST00000343380 VIRMAQ69YN4 1812 aaKnown RBP27.05■■□□□ 1.92
E2F1-201ENST00000343380 SHPRHQ149N8 1683 aa27.04■■□□□ 1.92
E2F1-201ENST00000343380 NLRP1Q9C000 1473 aa27.04■■□□□ 1.92
E2F1-201ENST00000343380 INO80Q9ULG1 1556 aaPredicted RBP27.04■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms