RNA–Protein interactions for RNA: ENST00000342287.9

PBX3-201, Transcript of PBX homeobox 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PBX3, Length 2,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-201ENST00000342287 CHGAP10645 457 aaKnown RBP20.17■□□□□ 0.82
PBX3-201ENST00000342287 CFAP65Q6ZU64 1925 aaKnown RBP20.17■□□□□ 0.82
PBX3-201ENST00000342287 SIGLEC1Q9BZZ2 1709 aa20.16■□□□□ 0.82
PBX3-201ENST00000342287 ST20-MTHFSA0A0A6YYL1 179 aa20.16■□□□□ 0.82
PBX3-201ENST00000342287 SLC52A1Q9NWF4 448 aa20.16■□□□□ 0.82
PBX3-201ENST00000342287 ADGRB3O60242 1522 aa20.16■□□□□ 0.82
PBX3-201ENST00000342287 MADDQ8WXG6 1647 aa20.16■□□□□ 0.82
PBX3-201ENST00000342287 KIF7Q2M1P5 1343 aa20.16■□□□□ 0.82
PBX3-201ENST00000342287 LAMC1P11047 1609 aa20.15■□□□□ 0.82
PBX3-201ENST00000342287 ARID4BQ4LE39 1312 aaPredicted RBP20.15■□□□□ 0.82
PBX3-201ENST00000342287 MLECQ14165 292 aa20.15■□□□□ 0.82
PBX3-201ENST00000342287 SYNMO15061 1565 aa20.14■□□□□ 0.81
PBX3-201ENST00000342287 MYOM2P54296 1465 aa20.14■□□□□ 0.81
PBX3-201ENST00000342287 RPGRIP1LQ68CZ1 1315 aa20.13■□□□□ 0.81
PBX3-201ENST00000342287 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.13■□□□□ 0.81
PBX3-201ENST00000342287 ANP32CO43423 234 aa20.12■□□□□ 0.81
PBX3-201ENST00000342287 PIK3C2BO00750 1634 aa20.12■□□□□ 0.81
PBX3-201ENST00000342287 MROH2AA6NES4 1674 aa20.12■□□□□ 0.81
PBX3-201ENST00000342287 IDI1Q13907 227 aa20.12■□□□□ 0.81
PBX3-201ENST00000342287 POLR1AO95602 1720 aaPredicted RBP20.1■□□□□ 0.81
PBX3-201ENST00000342287 ADGRF5Q8IZF2 1346 aa20.1■□□□□ 0.81
PBX3-201ENST00000342287 FKBP8Q14318 412 aa20.1■□□□□ 0.81
PBX3-201ENST00000342287 ESF1Q9H501 851 aaKnown RBP20.1■□□□□ 0.81
PBX3-201ENST00000342287 FBXO31Q5XUX0 539 aaPredicted RBP20.1■□□□□ 0.81
PBX3-201ENST00000342287 PREX1Q8TCU6 1659 aa20.1■□□□□ 0.81
PBX3-201ENST00000342287 CLTCQ00610 1675 aaKnown RBP20.08■□□□□ 0.81
PBX3-201ENST00000342287 IFT172Q9UG01 1749 aa20.08■□□□□ 0.81
PBX3-201ENST00000342287 ERVK-7P63135 1459 aa20.08■□□□□ 0.8
PBX3-201ENST00000342287 NRXN1Q9ULB1 1477 aa20.08■□□□□ 0.8
PBX3-201ENST00000342287 ERICH6BQ5W0A0 696 aa20.07■□□□□ 0.8
PBX3-201ENST00000342287 KIAA1210Q9ULL0 1709 aa20.06■□□□□ 0.8
PBX3-201ENST00000342287 CFAP70Q5T0N1 1121 aa20.05■□□□□ 0.8
PBX3-201ENST00000342287 VGFO15240 615 aaPredicted RBP20.04■□□□□ 0.8
PBX3-201ENST00000342287 POLR3GLQ9BT43 218 aa20.04■□□□□ 0.8
PBX3-201ENST00000342287 ZMYM3Q14202 1370 aa20.03■□□□□ 0.8
PBX3-201ENST00000342287 SCAF11Q99590 1463 aaKnown RBP20.03■□□□□ 0.8
PBX3-201ENST00000342287 PLEKHG5O94827 1062 aa20.03■□□□□ 0.8
PBX3-201ENST00000342287 PPLO60437 1756 aa20.03■□□□□ 0.8
PBX3-201ENST00000342287 TESK2Q96S53 571 aa20.02■□□□□ 0.8
PBX3-201ENST00000342287 CCER2I3L3R5 266 aa20.01■□□□□ 0.79
PBX3-201ENST00000342287 SPATA31D1Q6ZQQ2 1576 aa20.01■□□□□ 0.79
PBX3-201ENST00000342287 PIK3C2GO75747 1445 aa20■□□□□ 0.79
PBX3-201ENST00000342287 C14orf93Q9H972 538 aaKnown RBP20■□□□□ 0.79
PBX3-201ENST00000342287 PKNOX2Q96KN3 472 aa19.99■□□□□ 0.79
PBX3-201ENST00000342287 TMEM131LA2VDJ0 1609 aa19.99■□□□□ 0.79
PBX3-201ENST00000342287 IQGAP1P46940 1657 aa19.99■□□□□ 0.79
PBX3-201ENST00000342287 NEXMIFQ5QGS0 1516 aa19.99■□□□□ 0.79
PBX3-201ENST00000342287 RTN4Q9NQC3 1192 aaKnown RBP19.99■□□□□ 0.79
PBX3-201ENST00000342287 EIF3AQ14152 1382 aaKnown RBP19.99■□□□□ 0.79
PBX3-201ENST00000342287 TMF1P82094 1093 aa19.98■□□□□ 0.79
PBX3-201ENST00000342287 STAG3Q9UJ98 1225 aa19.98■□□□□ 0.79
PBX3-201ENST00000342287 ZFYVE9O95405 1425 aa19.98■□□□□ 0.79
PBX3-201ENST00000342287 NUTM2DQ5VT03 806 aaPredicted RBP19.95■□□□□ 0.78
PBX3-201ENST00000342287 SETBP1Q9Y6X0 1596 aa19.95■□□□□ 0.78
PBX3-201ENST00000342287 FANCIQ9NVI1 1328 aa19.94■□□□□ 0.78
PBX3-201ENST00000342287 DISP3Q9P2K9 1392 aa19.93■□□□□ 0.78
PBX3-201ENST00000342287 PRKRIP1Q9H875 184 aaPredicted RBP19.91■□□□□ 0.78
PBX3-201ENST00000342287 IL27Q8NEV9 243 aa19.91■□□□□ 0.78
PBX3-201ENST00000342287 MYO5BQ9ULV0 1848 aa19.9■□□□□ 0.78
PBX3-201ENST00000342287 A2ML1A8K2U0 1454 aa19.9■□□□□ 0.78
PBX3-201ENST00000342287 TNRQ92752 1358 aa19.9■□□□□ 0.78
PBX3-201ENST00000342287 CDCA8Q53HL2 280 aa19.9■□□□□ 0.78
PBX3-201ENST00000342287 ADGRB1O14514 1584 aa19.89■□□□□ 0.77
PBX3-201ENST00000342287 TMEM132EQ6IEE7 984 aa19.89■□□□□ 0.77
PBX3-201ENST00000342287 NBR1Q14596 966 aa19.88■□□□□ 0.77
PBX3-201ENST00000342287 DAXXQ9UER7 740 aaPredicted RBP19.88■□□□□ 0.77
PBX3-201ENST00000342287 NEFLP07196 543 aa19.86■□□□□ 0.77
PBX3-201ENST00000342287 TRAK1Q9UPV9 953 aa19.86■□□□□ 0.77
PBX3-201ENST00000342287 CENPJQ9HC77 1338 aaPredicted RBP19.84■□□□□ 0.77
PBX3-201ENST00000342287 RIMS2Q9UQ26 1411 aa19.84■□□□□ 0.77
PBX3-201ENST00000342287 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.83■□□□□ 0.77
PBX3-201ENST00000342287 SBNO2Q9Y2G9 1366 aa19.83■□□□□ 0.76
PBX3-201ENST00000342287 CEBPAP49715 358 aaPredicted RBP19.83■□□□□ 0.76
PBX3-201ENST00000342287 HDGFP51858 240 aaKnown RBP19.83■□□□□ 0.76
PBX3-201ENST00000342287 MYO3AQ8NEV4 1616 aa19.82■□□□□ 0.76
PBX3-201ENST00000342287 PODXL2Q9NZ53 605 aa19.79■□□□□ 0.76
PBX3-201ENST00000342287 NLRP1Q9C000 1473 aa19.79■□□□□ 0.76
PBX3-201ENST00000342287 PER1O15534 1290 aaPredicted RBP19.79■□□□□ 0.76
PBX3-201ENST00000342287 PANK3Q9H999 370 aa19.79■□□□□ 0.76
PBX3-201ENST00000342287 FER1L4A9Z1Z3 1794 aa19.79■□□□□ 0.76
PBX3-201ENST00000342287 SENP3Q9H4L4 574 aaPredicted RBP19.78■□□□□ 0.76
PBX3-201ENST00000342287 KDM5AP29375 1690 aaKnown RBP19.78■□□□□ 0.76
PBX3-201ENST00000342287 ALKQ9UM73 1620 aa19.77■□□□□ 0.76
PBX3-201ENST00000342287 KTN1Q86UP2 1357 aaKnown RBP19.77■□□□□ 0.76
PBX3-201ENST00000342287 C3P01024 1663 aa19.77■□□□□ 0.75
PBX3-201ENST00000342287 CNGB1Q14028 1251 aaPredicted RBP19.76■□□□□ 0.75
PBX3-201ENST00000342287 ASXL1Q8IXJ9 1541 aa19.75■□□□□ 0.75
PBX3-201ENST00000342287 TMEM2Q9UHN6 1383 aa19.75■□□□□ 0.75
PBX3-201ENST00000342287 RALBP1Q15311 655 aa19.75■□□□□ 0.75
PBX3-201ENST00000342287 STK26Q9P289 416 aa19.75■□□□□ 0.75
PBX3-201ENST00000342287 YTHDC2Q9H6S0 1430 aaKnown RBP19.74■□□□□ 0.75
PBX3-201ENST00000342287 UBR1Q8IWV7 1749 aa19.73■□□□□ 0.75
PBX3-201ENST00000342287 PLPPR3Q6T4P5 718 aa19.73■□□□□ 0.75
PBX3-201ENST00000342287 MRS2Q9HD23 443 aa19.73■□□□□ 0.75
PBX3-201ENST00000342287 CCDC184Q52MB2 194 aa19.73■□□□□ 0.75
PBX3-201ENST00000342287 QRICH2Q9H0J4 1663 aa19.72■□□□□ 0.75
PBX3-201ENST00000342287 ARHGEF28Q8N1W1 1705 aaKnown RBP19.71■□□□□ 0.75
PBX3-201ENST00000342287 PUS7Q96PZ0 661 aaKnown RBP19.7■□□□□ 0.74
PBX3-201ENST00000342287 KNSTRNQ9Y448 316 aa19.7■□□□□ 0.74
PBX3-201ENST00000342287 EVC2Q86UK5 1308 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 127 ms