RNA–Protein interactions for RNA: ENST00000341926.7

CAST-204, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CAST, Length 2,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-204ENST00000341926 NBPF5PQ86XG9 351 aaPredicted RBP10.3□□□□□ -0.76
CAST-204ENST00000341926 NBPF4Q96M43 638 aa10.3□□□□□ -0.76
CAST-204ENST00000341926 ABCC8Q09428 1581 aa10.3□□□□□ -0.76
CAST-204ENST00000341926 NINLQ9Y2I6 1382 aa10.29□□□□□ -0.76
CAST-204ENST00000341926 ZKSCAN8Q15776 578 aaPredicted RBP10.29□□□□□ -0.76
CAST-204ENST00000341926 CT47A1Q5JQC4 288 aaPredicted RBP10.29□□□□□ -0.76
CAST-204ENST00000341926 SIRT1Q96EB6 747 aa10.29□□□□□ -0.76
CAST-204ENST00000341926 CDCA8Q53HL2 280 aa10.29□□□□□ -0.76
CAST-204ENST00000341926 RNF217Q8TC41 542 aa10.29□□□□□ -0.76
CAST-204ENST00000341926 SMC4Q9NTJ3 1288 aa10.29□□□□□ -0.76
CAST-204ENST00000341926 TOPBP1Q92547 1522 aa10.29□□□□□ -0.76
CAST-204ENST00000341926 WDR97A6NE52 1622 aa10.28□□□□□ -0.76
CAST-204ENST00000341926 CTR9Q6PD62 1173 aa10.28□□□□□ -0.76
CAST-204ENST00000341926 TARBP1Q13395 1621 aaKnown RBP10.28□□□□□ -0.76
CAST-204ENST00000341926 MFAP1P55081 439 aaKnown RBP10.28□□□□□ -0.76
CAST-204ENST00000341926 DDX10Q13206 875 aaKnown RBP10.28□□□□□ -0.76
CAST-204ENST00000341926 EP400NLQ6ZTU2 488 aa10.28□□□□□ -0.76
CAST-204ENST00000341926 CFAP65Q6ZU64 1925 aaKnown RBP10.28□□□□□ -0.76
CAST-204ENST00000341926 CAPN2P17655 700 aa10.27□□□□□ -0.77
CAST-204ENST00000341926 GABPB1Q06547 395 aaPredicted RBP10.27□□□□□ -0.77
CAST-204ENST00000341926 MPNDQ8N594 471 aa10.27□□□□□ -0.77
CAST-204ENST00000341926 R3HCC1Q9Y3T6 440 aaKnown RBP10.27□□□□□ -0.77
CAST-204ENST00000341926 KIF16BQ96L93 1317 aa10.27□□□□□ -0.77
CAST-204ENST00000341926 SYNJ1O43426 1573 aa10.26□□□□□ -0.77
CAST-204ENST00000341926 CSPP1Q1MSJ5 1256 aa10.26□□□□□ -0.77
CAST-204ENST00000341926 DNMBPQ6XZF7 1577 aa10.26□□□□□ -0.77
CAST-204ENST00000341926 SASS6Q6UVJ0 657 aa10.26□□□□□ -0.77
CAST-204ENST00000341926 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.26□□□□□ -0.77
CAST-204ENST00000341926 GRPEL1Q9HAV7 217 aa10.26□□□□□ -0.77
CAST-204ENST00000341926 CBX1P83916 185 aa10.25□□□□□ -0.77
CAST-204ENST00000341926 ZNF771Q7L3S4 317 aaPredicted RBP10.25□□□□□ -0.77
CAST-204ENST00000341926 CALCOCO1Q9P1Z2 691 aa10.25□□□□□ -0.77
CAST-204ENST00000341926 TOP2AP11388 1531 aaKnown RBP10.25□□□□□ -0.77
CAST-204ENST00000341926 KIF1CO43896 1103 aaKnown RBP10.25□□□□□ -0.77
CAST-204ENST00000341926 HS1BP3Q53T59 392 aa10.25□□□□□ -0.77
CAST-204ENST00000341926 BRMS1Q9HCU9 246 aa10.25□□□□□ -0.77
CAST-204ENST00000341926 CCDC27Q2M243 656 aa10.24□□□□□ -0.77
CAST-204ENST00000341926 ILDR1Q86SU0 546 aaPredicted RBP10.24□□□□□ -0.77
CAST-204ENST00000341926 ZBTB9Q96C00 473 aa10.24□□□□□ -0.77
CAST-204ENST00000341926 DONSONQ9NYP3 566 aa10.24□□□□□ -0.77
CAST-204ENST00000341926 MSNP26038 577 aaKnown RBP10.23□□□□□ -0.77
CAST-204ENST00000341926 ARID4AP29374 1257 aaPredicted RBP10.23□□□□□ -0.77
CAST-204ENST00000341926 SMG6Q86US8 1419 aaKnown RBP10.23□□□□□ -0.77
CAST-204ENST00000341926 CCDC96Q2M329 555 aa10.23□□□□□ -0.77
CAST-204ENST00000341926 TMTC2Q8N394 836 aa10.23□□□□□ -0.77
CAST-204ENST00000341926 PPP1R9BQ96SB3 815 aa10.23□□□□□ -0.77
CAST-204ENST00000341926 RAD50Q92878 1312 aa10.22□□□□□ -0.77
CAST-204ENST00000341926 CCDC173Q0VFZ6 552 aa10.22□□□□□ -0.77
CAST-204ENST00000341926 SGSM3Q96HU1 749 aa10.22□□□□□ -0.77
CAST-204ENST00000341926 STK26Q9P289 416 aa10.22□□□□□ -0.77
CAST-204ENST00000341926 NOP2P46087 812 aaKnown RBP10.21□□□□□ -0.77
CAST-204ENST00000341926 GTF2A1P52655 376 aaPredicted RBP10.21□□□□□ -0.77
CAST-204ENST00000341926 BECN1Q14457 450 aa10.21□□□□□ -0.77
CAST-204ENST00000341926 TSHZ1Q6ZSZ6 1077 aa10.21□□□□□ -0.77
CAST-204ENST00000341926 HSP90AB4PQ58FF6 505 aa10.21□□□□□ -0.78
CAST-204ENST00000341926 SLC4A3P48751 1232 aa10.2□□□□□ -0.78
CAST-204ENST00000341926 ATP2B3Q16720 1220 aa10.2□□□□□ -0.78
CAST-204ENST00000341926 ITFG2Q969R8 447 aa10.2□□□□□ -0.78
CAST-204ENST00000341926 FEZ2Q9UHY8 353 aaPredicted RBP10.2□□□□□ -0.78
CAST-204ENST00000341926 MLECQ14165 292 aa10.19□□□□□ -0.78
CAST-204ENST00000341926 RGL3Q3MIN7 710 aa10.19□□□□□ -0.78
CAST-204ENST00000341926 MNS1Q8NEH6 495 aa10.19□□□□□ -0.78
CAST-204ENST00000341926 ZNF853P0CG23 659 aa10.19□□□□□ -0.78
CAST-204ENST00000341926 MTA1Q13330 715 aa10.19□□□□□ -0.78
CAST-204ENST00000341926 BORCS6Q96GS4 357 aa10.19□□□□□ -0.78
CAST-204ENST00000341926 SIN3AQ96ST3 1273 aa10.19□□□□□ -0.78
CAST-204ENST00000341926 FEZ1Q99689 392 aa10.19□□□□□ -0.78
CAST-204ENST00000341926 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.18□□□□□ -0.78
CAST-204ENST00000341926 AQRO60306 1485 aaKnown RBP eCLIP10.18□□□□□ -0.782e-6■■■■□ 24.4
CAST-204ENST00000341926 CALRP27797 417 aaKnown RBP10.18□□□□□ -0.78
CAST-204ENST00000341926 GTF2F1P35269 517 aaKnown RBP eCLIP10.18□□□□□ -0.78
CAST-204ENST00000341926 ANKRD23Q86SG2 305 aa10.18□□□□□ -0.78
CAST-204ENST00000341926 CREBRFQ8IUR6 639 aa10.18□□□□□ -0.78
CAST-204ENST00000341926 MED4Q9NPJ6 270 aa10.18□□□□□ -0.78
CAST-204ENST00000341926 MRVI1Q9Y6F6 885 aa10.18□□□□□ -0.78
CAST-204ENST00000341926 GUCY2CP25092 1073 aa10.17□□□□□ -0.78
CAST-204ENST00000341926 MCM5P33992 734 aa10.17□□□□□ -0.78
CAST-204ENST00000341926 FAM50AQ14320 339 aaKnown RBP10.17□□□□□ -0.78
CAST-204ENST00000341926 ICE2Q659A1 982 aa10.17□□□□□ -0.78
CAST-204ENST00000341926 SLC26A8Q96RN1 970 aa10.17□□□□□ -0.78
CAST-204ENST00000341926 KIF13AQ9H1H9 1805 aa10.17□□□□□ -0.78
CAST-204ENST00000341926 TNNT3P45378 269 aaPredicted RBP10.17□□□□□ -0.78
CAST-204ENST00000341926 RINLQ6ZS11 566 aa10.17□□□□□ -0.78
CAST-204ENST00000341926 FAM9BQ8IZU0 186 aa10.17□□□□□ -0.78
CAST-204ENST00000341926 MYRIPQ8NFW9 859 aa10.17□□□□□ -0.78
CAST-204ENST00000341926 MKL1Q969V6 931 aa10.17□□□□□ -0.78
CAST-204ENST00000341926 FAM210AQ96ND0 272 aa10.17□□□□□ -0.78
CAST-204ENST00000341926 GAPVD1Q14C86 1478 aa10.17□□□□□ -0.78
CAST-204ENST00000341926 MAGI1Q96QZ7 1491 aaPredicted RBP10.17□□□□□ -0.78
CAST-204ENST00000341926 SETDB1Q15047 1291 aa10.16□□□□□ -0.78
CAST-204ENST00000341926 HNRNPUL2Q1KMD3 747 aaKnown RBP10.16□□□□□ -0.78
CAST-204ENST00000341926 NRDCO43847 1150 aa10.16□□□□□ -0.78
CAST-204ENST00000341926 ZNF513Q8N8E2 541 aaPredicted RBP10.16□□□□□ -0.78
CAST-204ENST00000341926 CEP162Q5TB80 1403 aa10.15□□□□□ -0.78
CAST-204ENST00000341926 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.15□□□□□ -0.787e-7■■■■■ 104.8
CAST-204ENST00000341926 KIF3CO14782 793 aa10.15□□□□□ -0.78
CAST-204ENST00000341926 TDO2P48775 406 aa10.15□□□□□ -0.78
CAST-204ENST00000341926 ZNF710Q8N1W2 664 aa10.15□□□□□ -0.78
CAST-204ENST00000341926 NOL7Q9UMY1 257 aaKnown RBP10.15□□□□□ -0.78
CAST-204ENST00000341926 ZBTB12Q9Y330 459 aaPredicted RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms