RNA–Protein interactions for RNA: ENST00000340171.6

C3orf33-201, Transcript of chromosome 3 open reading frame 33, humanhuman

TSL 1 (best) BASIC

Gene C3orf33, Length 1,884 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf33-201ENST00000340171 IFT172Q9UG01 1749 aa28.63■■■□□ 2.17
C3orf33-201ENST00000340171 NEXMIFQ5QGS0 1516 aa28.63■■■□□ 2.17
C3orf33-201ENST00000340171 RIMS2Q9UQ26 1411 aa28.6■■■□□ 2.17
C3orf33-201ENST00000340171 HSPA2P54652 639 aa28.6■■■□□ 2.17
C3orf33-201ENST00000340171 THEMISQ8N1K5 641 aaPredicted RBP28.6■■■□□ 2.17
C3orf33-201ENST00000340171 LMTK3Q96Q04 1460 aa28.6■■■□□ 2.17
C3orf33-201ENST00000340171 ZNF316A6NFI3 1004 aaPredicted RBP28.59■■■□□ 2.17
C3orf33-201ENST00000340171 TMEM2Q9UHN6 1383 aa28.59■■■□□ 2.17
C3orf33-201ENST00000340171 ZFYVE9O95405 1425 aa28.57■■■□□ 2.16
C3orf33-201ENST00000340171 NBPF8Q3BBV2 869 aa28.56■■■□□ 2.16
C3orf33-201ENST00000340171 ADGRF5Q8IZF2 1346 aa28.56■■■□□ 2.16
C3orf33-201ENST00000340171 LTKP29376 864 aa28.54■■■□□ 2.16
C3orf33-201ENST00000340171 RPGRIP1LQ68CZ1 1315 aa28.54■■■□□ 2.16
C3orf33-201ENST00000340171 SLIT1O75093 1534 aa28.53■■■□□ 2.16
C3orf33-201ENST00000340171 ARHGAP23Q9P227 1491 aa28.52■■■□□ 2.16
C3orf33-201ENST00000340171 TXNDC2Q86VQ3 553 aa28.52■■■□□ 2.16
C3orf33-201ENST00000340171 MYOM2P54296 1465 aa28.5■■■□□ 2.15
C3orf33-201ENST00000340171 VGFO15240 615 aaPredicted RBP28.48■■■□□ 2.15
C3orf33-201ENST00000340171 AEBP2Q6ZN18 517 aaPredicted RBP28.48■■■□□ 2.15
C3orf33-201ENST00000340171 EID1Q9Y6B2 187 aa28.48■■■□□ 2.15
C3orf33-201ENST00000340171 PRAG1Q86YV5 1406 aa28.47■■■□□ 2.15
C3orf33-201ENST00000340171 SCAF11Q99590 1463 aaKnown RBP28.46■■■□□ 2.15
C3orf33-201ENST00000340171 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.46■■■□□ 2.15
C3orf33-201ENST00000340171 BCANQ96GW7 911 aa28.46■■■□□ 2.15
C3orf33-201ENST00000340171 NCKAP5LQ9HCH0 1330 aa28.46■■■□□ 2.15
C3orf33-201ENST00000340171 POLR1AO95602 1720 aaPredicted RBP28.44■■■□□ 2.14
C3orf33-201ENST00000340171 ANKLE2Q86XL3 938 aa28.44■■■□□ 2.14
C3orf33-201ENST00000340171 HDGFP51858 240 aaKnown RBP28.43■■■□□ 2.14
C3orf33-201ENST00000340171 IQGAP1P46940 1657 aa28.43■■■□□ 2.14
C3orf33-201ENST00000340171 NRXN1Q9ULB1 1477 aa28.43■■■□□ 2.14
C3orf33-201ENST00000340171 PIK3C2GO75747 1445 aa28.43■■■□□ 2.14
C3orf33-201ENST00000340171 STAC3Q96MF2 364 aa28.42■■■□□ 2.14
C3orf33-201ENST00000340171 CFAP70Q5T0N1 1121 aa28.4■■■□□ 2.14
C3orf33-201ENST00000340171 NRXN3Q9Y4C0 1643 aa28.39■■■□□ 2.14
C3orf33-201ENST00000340171 TRPM1Q7Z4N2 1603 aa28.38■■■□□ 2.13
C3orf33-201ENST00000340171 PLEKHG1Q9ULL1 1385 aa28.37■■■□□ 2.13
C3orf33-201ENST00000340171 RALGAPBQ86X10 1494 aa28.37■■■□□ 2.13
C3orf33-201ENST00000340171 SLC26A8Q96RN1 970 aa28.36■■■□□ 2.13
C3orf33-201ENST00000340171 STRCQ7RTU9 1775 aa28.36■■■□□ 2.13
C3orf33-201ENST00000340171 NBPF1Q3BBV0 1214 aa28.36■■■□□ 2.13
C3orf33-201ENST00000340171 EIF4G2P78344 907 aaKnown RBP eCLIP28.35■■■□□ 2.13
C3orf33-201ENST00000340171 HIRIP3Q9BW71 556 aaPredicted RBP28.35■■■□□ 2.13
C3orf33-201ENST00000340171 ALKQ9UM73 1620 aa28.34■■■□□ 2.13
C3orf33-201ENST00000340171 SETBP1Q9Y6X0 1596 aa28.33■■■□□ 2.13
C3orf33-201ENST00000340171 NPHP4O75161 1426 aaPredicted RBP28.32■■■□□ 2.12
C3orf33-201ENST00000340171 TMEM132EQ6IEE7 984 aa28.32■■■□□ 2.12
C3orf33-201ENST00000340171 ADAMTS13Q76LX8 1427 aa28.31■■■□□ 2.12
C3orf33-201ENST00000340171 SETD1AO15047 1707 aaKnown RBP28.31■■■□□ 2.12
C3orf33-201ENST00000340171 ROCK2O75116 1388 aaKnown RBP28.31■■■□□ 2.12
C3orf33-201ENST00000340171 HSPA5P11021 654 aaKnown RBP28.3■■■□□ 2.12
C3orf33-201ENST00000340171 CARD11Q9BXL7 1154 aa28.3■■■□□ 2.12
C3orf33-201ENST00000340171 C14orf93Q9H972 538 aaKnown RBP28.3■■■□□ 2.12
C3orf33-201ENST00000340171 LAMC1P11047 1609 aa28.28■■■□□ 2.12
C3orf33-201ENST00000340171 ASXL1Q8IXJ9 1541 aa28.28■■■□□ 2.12
C3orf33-201ENST00000340171 KIAA1210Q9ULL0 1709 aa28.28■■■□□ 2.12
C3orf33-201ENST00000340171 MED14O60244 1454 aa28.27■■■□□ 2.12
C3orf33-201ENST00000340171 METP08581 1390 aa28.25■■■□□ 2.11
C3orf33-201ENST00000340171 ADGRB1O14514 1584 aa28.23■■■□□ 2.11
C3orf33-201ENST00000340171 USP47Q96K76 1375 aa28.22■■■□□ 2.11
C3orf33-201ENST00000340171 STK26Q9P289 416 aa28.22■■■□□ 2.11
C3orf33-201ENST00000340171 DIEXFQ68CQ4 756 aaKnown RBP28.21■■■□□ 2.11
C3orf33-201ENST00000340171 GPRASP1Q5JY77 1395 aa28.2■■■□□ 2.11
C3orf33-201ENST00000340171 DIP2AQ14689 1571 aa28.2■■■□□ 2.1
C3orf33-201ENST00000340171 TBX22Q9Y458 520 aa28.18■■■□□ 2.1
C3orf33-201ENST00000340171 TRAK1Q9UPV9 953 aa28.17■■■□□ 2.1
C3orf33-201ENST00000340171 PTPRUQ92729 1446 aa28.15■■■□□ 2.1
C3orf33-201ENST00000340171 YTHDC2Q9H6S0 1430 aaKnown RBP28.15■■■□□ 2.1
C3orf33-201ENST00000340171 CHD2O14647 1828 aaKnown RBP28.1■■■□□ 2.09
C3orf33-201ENST00000340171 AMOTL2Q9Y2J4 779 aa28.1■■■□□ 2.09
C3orf33-201ENST00000340171 ST20-MTHFSA0A0A6YYL1 179 aa28.08■■■□□ 2.09
C3orf33-201ENST00000340171 ARHGEF28Q8N1W1 1705 aaKnown RBP28.08■■■□□ 2.09
C3orf33-201ENST00000340171 LRPPRCP42704 1394 aaKnown RBP28.08■■■□□ 2.09
C3orf33-201ENST00000340171 SAFB2Q14151 953 aaKnown RBP eCLIP28.07■■■□□ 2.08
C3orf33-201ENST00000340171 KCNA6P17658 529 aa28.06■■■□□ 2.08
C3orf33-201ENST00000340171 STRCP1A6NGW2 1772 aa28.06■■■□□ 2.08
C3orf33-201ENST00000340171 XRN1Q8IZH2 1706 aaKnown RBP28.06■■■□□ 2.08
C3orf33-201ENST00000340171 DMRT2Q9Y5R5 561 aa28.04■■■□□ 2.08
C3orf33-201ENST00000340171 ZNF335Q9H4Z2 1342 aaPredicted RBP28.04■■■□□ 2.08
C3orf33-201ENST00000340171 KNDC1Q76NI1 1749 aa28.04■■■□□ 2.08
C3orf33-201ENST00000340171 WAPLQ7Z5K2 1190 aa28.03■■■□□ 2.08
C3orf33-201ENST00000340171 RBM33Q96EV2 1170 aaKnown RBP28.03■■■□□ 2.08
C3orf33-201ENST00000340171 PIK3R4Q99570 1358 aa28.03■■■□□ 2.08
C3orf33-201ENST00000340171 ROBO2Q9HCK4 1378 aa28.03■■■□□ 2.08
C3orf33-201ENST00000340171 DDX10Q13206 875 aaKnown RBP28.02■■■□□ 2.08
C3orf33-201ENST00000340171 PLEKHH1Q9ULM0 1364 aa28.02■■■□□ 2.08
C3orf33-201ENST00000340171 WASHC2AQ641Q2 1341 aa28.02■■■□□ 2.08
C3orf33-201ENST00000340171 PRAM1Q96QH2 718 aa28.02■■■□□ 2.08
C3orf33-201ENST00000340171 ABCC11Q96J66 1382 aa28.02■■■□□ 2.08
C3orf33-201ENST00000340171 C11orf95C9JLR9 678 aaPredicted RBP28.01■■■□□ 2.07
C3orf33-201ENST00000340171 CPS1P31327 1500 aa28.01■■■□□ 2.07
C3orf33-201ENST00000340171 NWD1Q149M9 1564 aa27.99■■■□□ 2.07
C3orf33-201ENST00000340171 EIF3AQ14152 1382 aaKnown RBP27.99■■■□□ 2.07
C3orf33-201ENST00000340171 POGKQ9P215 609 aa27.99■■■□□ 2.07
C3orf33-201ENST00000340171 TECPR2O15040 1411 aa27.98■■■□□ 2.07
C3orf33-201ENST00000340171 QRICH2Q9H0J4 1663 aa27.98■■■□□ 2.07
C3orf33-201ENST00000340171 DLC1Q96QB1 1528 aa27.97■■■□□ 2.07
C3orf33-201ENST00000340171 CCDC7Q96M83 1385 aa27.96■■■□□ 2.07
C3orf33-201ENST00000340171 CENPJQ9HC77 1338 aaPredicted RBP27.96■■■□□ 2.07
C3orf33-201ENST00000340171 KIF7Q2M1P5 1343 aa27.95■■■□□ 2.06
C3orf33-201ENST00000340171 PTCH1Q13635 1447 aa27.94■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms