RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 CCDC141Q6ZP82 1450 aa20.87■□□□□ 0.93
SCARB1-202ENST00000339570 MAGI2Q86UL8 1455 aa20.87■□□□□ 0.93
SCARB1-202ENST00000339570 CFAP70Q5T0N1 1121 aa20.86■□□□□ 0.93
SCARB1-202ENST00000339570 ARHGAP5Q13017 1502 aa20.86■□□□□ 0.93
SCARB1-202ENST00000339570 BLMP54132 1417 aaPredicted RBP20.86■□□□□ 0.93
SCARB1-202ENST00000339570 SYCP2Q9BX26 1530 aa20.85■□□□□ 0.93
SCARB1-202ENST00000339570 SYNJ2O15056 1496 aa20.84■□□□□ 0.93
SCARB1-202ENST00000339570 NUTM2DQ5VT03 806 aaPredicted RBP20.83■□□□□ 0.93
SCARB1-202ENST00000339570 POGKQ9P215 609 aa20.81■□□□□ 0.92
SCARB1-202ENST00000339570 WASHC2CQ9Y4E1 1318 aa20.81■□□□□ 0.92
SCARB1-202ENST00000339570 GZF1Q9H116 711 aaPredicted RBP20.81■□□□□ 0.92
SCARB1-202ENST00000339570 TRPM1Q7Z4N2 1603 aa20.81■□□□□ 0.92
SCARB1-202ENST00000339570 ZMYM4Q5VZL5 1548 aa20.8■□□□□ 0.92
SCARB1-202ENST00000339570 SAFB2Q14151 953 aaKnown RBP eCLIP20.79■□□□□ 0.92
SCARB1-202ENST00000339570 E9PCH4 1651 aa20.79■□□□□ 0.92
SCARB1-202ENST00000339570 CENPJQ9HC77 1338 aaPredicted RBP20.79■□□□□ 0.92
SCARB1-202ENST00000339570 SHANK2Q9UPX8 1470 aa20.78■□□□□ 0.92
SCARB1-202ENST00000339570 TRAK1Q9UPV9 953 aa20.78■□□□□ 0.92
SCARB1-202ENST00000339570 SAMD9LQ8IVG5 1584 aa20.77■□□□□ 0.92
SCARB1-202ENST00000339570 KIF3BO15066 747 aa20.76■□□□□ 0.91
SCARB1-202ENST00000339570 CDCA8Q53HL2 280 aa20.76■□□□□ 0.91
SCARB1-202ENST00000339570 RSPH4AQ5TD94 716 aa20.76■□□□□ 0.91
SCARB1-202ENST00000339570 GPRASP1Q5JY77 1395 aa20.75■□□□□ 0.91
SCARB1-202ENST00000339570 CARD14Q9BXL6 1004 aa20.75■□□□□ 0.91
SCARB1-202ENST00000339570 E9PSI1 815 aa20.74■□□□□ 0.91
SCARB1-202ENST00000339570 MORC1Q86VD1 984 aa20.74■□□□□ 0.91
SCARB1-202ENST00000339570 ZNF521Q96K83 1311 aa20.73■□□□□ 0.91
SCARB1-202ENST00000339570 ABCA8O94911 1581 aa20.73■□□□□ 0.91
SCARB1-202ENST00000339570 WDR7Q9Y4E6 1490 aa20.73■□□□□ 0.91
SCARB1-202ENST00000339570 ADCY10Q96PN6 1610 aa20.72■□□□□ 0.91
SCARB1-202ENST00000339570 TMEM132EQ6IEE7 984 aa20.72■□□□□ 0.91
SCARB1-202ENST00000339570 SLC12A5Q9H2X9 1139 aa20.72■□□□□ 0.91
SCARB1-202ENST00000339570 RLBP1P12271 317 aa20.72■□□□□ 0.91
SCARB1-202ENST00000339570 SPAG9O60271 1321 aaKnown RBP20.72■□□□□ 0.91
SCARB1-202ENST00000339570 WWC1Q8IX03 1113 aa20.71■□□□□ 0.91
SCARB1-202ENST00000339570 ADGRF5Q8IZF2 1346 aa20.7■□□□□ 0.9
SCARB1-202ENST00000339570 EFCAB2Q5VUJ9 269 aa20.7■□□□□ 0.9
SCARB1-202ENST00000339570 PCDHB15Q9Y5E8 787 aa20.7■□□□□ 0.9
SCARB1-202ENST00000339570 PRDM15P57071 1507 aaPredicted RBP20.68■□□□□ 0.9
SCARB1-202ENST00000339570 TCP11L2Q8N4U5 519 aa20.68■□□□□ 0.9
SCARB1-202ENST00000339570 NKTRP30414 1462 aaKnown RBP20.67■□□□□ 0.9
SCARB1-202ENST00000339570 MFAP1P55081 439 aaKnown RBP20.67■□□□□ 0.9
SCARB1-202ENST00000339570 NUP160Q12769 1436 aa20.67■□□□□ 0.9
SCARB1-202ENST00000339570 UPF2Q9HAU5 1272 aaKnown RBP20.66■□□□□ 0.9
SCARB1-202ENST00000339570 BECN1Q14457 450 aa20.66■□□□□ 0.9
SCARB1-202ENST00000339570 TSR2Q969E8 191 aaKnown RBP20.66■□□□□ 0.9
SCARB1-202ENST00000339570 PDZRN3Q9UPQ7 1066 aa20.66■□□□□ 0.9
SCARB1-202ENST00000339570 USP19O94966 1318 aa20.65■□□□□ 0.9
SCARB1-202ENST00000339570 U2AF1L5P0DN76 240 aaPredicted RBP20.65■□□□□ 0.9
SCARB1-202ENST00000339570 U2AF1Q01081 240 aaKnown RBP eCLIP20.65■□□□□ 0.93e-14■■□□□ 13.6
SCARB1-202ENST00000339570 CDC42BPBQ9Y5S2 1711 aa20.65■□□□□ 0.9
SCARB1-202ENST00000339570 U2SURPO15042 1029 aaKnown RBP20.65■□□□□ 0.9
SCARB1-202ENST00000339570 TRAPPC8Q9Y2L5 1435 aa20.64■□□□□ 0.89
SCARB1-202ENST00000339570 MTHFSP49914 203 aa20.63■□□□□ 0.89
SCARB1-202ENST00000339570 CGNL1Q0VF96 1302 aa20.63■□□□□ 0.89
SCARB1-202ENST00000339570 TTC37Q6PGP7 1564 aa20.63■□□□□ 0.89
SCARB1-202ENST00000339570 FTSJ3Q8IY81 847 aaKnown RBP20.63■□□□□ 0.89
SCARB1-202ENST00000339570 ASXL1Q8IXJ9 1541 aa20.61■□□□□ 0.89
SCARB1-202ENST00000339570 MYO5CQ9NQX4 1742 aa20.61■□□□□ 0.89
SCARB1-202ENST00000339570 RARSP54136 660 aaKnown RBP20.61■□□□□ 0.89
SCARB1-202ENST00000339570 TRMT2AQ8IZ69 625 aaKnown RBP20.6■□□□□ 0.89
SCARB1-202ENST00000339570 ARHGEF5Q12774 1597 aa20.6■□□□□ 0.89
SCARB1-202ENST00000339570 FOXD4L1Q9NU39 408 aa20.59■□□□□ 0.89
SCARB1-202ENST00000339570 GGT6Q6P531 493 aa20.59■□□□□ 0.89
SCARB1-202ENST00000339570 SCAF11Q99590 1463 aaKnown RBP20.58■□□□□ 0.89
SCARB1-202ENST00000339570 STK26Q9P289 416 aa20.58■□□□□ 0.89
SCARB1-202ENST00000339570 TBC1D2Q9BYX2 928 aa20.58■□□□□ 0.88
SCARB1-202ENST00000339570 EIF3AQ14152 1382 aaKnown RBP20.57■□□□□ 0.88
SCARB1-202ENST00000339570 ITPRIPQ8IWB1 547 aa20.57■□□□□ 0.88
SCARB1-202ENST00000339570 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.57■□□□□ 0.882e-7■■■■□ 22.7
SCARB1-202ENST00000339570 PDE3AQ14432 1141 aa20.56■□□□□ 0.88
SCARB1-202ENST00000339570 MAPK8IP3Q9UPT6 1336 aa20.56■□□□□ 0.88
SCARB1-202ENST00000339570 SMC4Q9NTJ3 1288 aa20.55■□□□□ 0.88
SCARB1-202ENST00000339570 UGGT1Q9NYU2 1555 aa20.55■□□□□ 0.88
SCARB1-202ENST00000339570 NSD3Q9BZ95 1437 aa20.54■□□□□ 0.88
SCARB1-202ENST00000339570 RUNDC1Q96C34 613 aa20.54■□□□□ 0.88
SCARB1-202ENST00000339570 PANK2Q9BZ23 570 aa20.53■□□□□ 0.88
SCARB1-202ENST00000339570 PREX2Q70Z35 1606 aa20.53■□□□□ 0.88
SCARB1-202ENST00000339570 PMFBP1Q8TBY8 1022 aa20.53■□□□□ 0.88
SCARB1-202ENST00000339570 CABP2Q9NPB3 220 aa20.52■□□□□ 0.88
SCARB1-202ENST00000339570 PIK3C2GO75747 1445 aa20.52■□□□□ 0.88
SCARB1-202ENST00000339570 EIF2AK4Q9P2K8 1649 aaKnown RBP20.51■□□□□ 0.87
SCARB1-202ENST00000339570 RWDD1Q9H446 243 aaPredicted RBP20.51■□□□□ 0.87
SCARB1-202ENST00000339570 ERCC6L2Q5T890 1561 aa20.51■□□□□ 0.87
SCARB1-202ENST00000339570 SCAPERQ9BY12 1400 aa20.5■□□□□ 0.87
SCARB1-202ENST00000339570 GGNBP2Q9H3C7 697 aa20.5■□□□□ 0.87
SCARB1-202ENST00000339570 EXOSC9Q06265 439 aaKnown RBP20.5■□□□□ 0.87
SCARB1-202ENST00000339570 DUOX2Q9NRD8 1548 aa20.49■□□□□ 0.87
SCARB1-202ENST00000339570 CFAP53Q96M91 514 aa20.49■□□□□ 0.87
SCARB1-202ENST00000339570 RRAGDQ9NQL2 400 aaPredicted RBP20.49■□□□□ 0.87
SCARB1-202ENST00000339570 CFAP65Q6ZU64 1925 aaKnown RBP20.49■□□□□ 0.87
SCARB1-202ENST00000339570 KANK1Q14678 1352 aa20.48■□□□□ 0.87
SCARB1-202ENST00000339570 FBLN1P23142 703 aa20.48■□□□□ 0.87
SCARB1-202ENST00000339570 MAST1Q9Y2H9 1570 aa20.48■□□□□ 0.87
SCARB1-202ENST00000339570 ATP10AO60312 1499 aa20.48■□□□□ 0.87
SCARB1-202ENST00000339570 ELL2O00472 640 aaPredicted RBP20.48■□□□□ 0.87
SCARB1-202ENST00000339570 INSRP06213 1382 aa20.47■□□□□ 0.87
SCARB1-202ENST00000339570 DZIP1LQ8IYY4 767 aaKnown RBP20.47■□□□□ 0.87
SCARB1-202ENST00000339570 TBC1D32Q96NH3 1257 aa20.47■□□□□ 0.87
SCARB1-202ENST00000339570 C22orf23Q9BZE7 217 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms