RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 ANKRD50Q9ULJ7 1429 aa15.17■□□□□ 0.02
RTN3-201ENST00000338850 PIK3C2BO00750 1634 aa15.16■□□□□ 0.02
RTN3-201ENST00000338850 NOS1P29475 1434 aa15.16■□□□□ 0.02
RTN3-201ENST00000338850 TOM1O60784 492 aa15.15■□□□□ 0.02
RTN3-201ENST00000338850 TXNDC2Q86VQ3 553 aa15.15■□□□□ 0.02
RTN3-201ENST00000338850 SYNMO15061 1565 aa15.15■□□□□ 0.02
RTN3-201ENST00000338850 TMEM2Q9UHN6 1383 aa15.14■□□□□ 0.01
RTN3-201ENST00000338850 IDI1Q13907 227 aa15.14■□□□□ 0.01
RTN3-201ENST00000338850 RPRD2Q5VT52 1461 aaKnown RBP15.14■□□□□ 0.01
RTN3-201ENST00000338850 STRCP1A6NGW2 1772 aa15.13■□□□□ 0.01
RTN3-201ENST00000338850 LRRC7Q96NW7 1537 aa15.13■□□□□ 0.01
RTN3-201ENST00000338850 PIP4K2BP78356 416 aa15.13■□□□□ 0.01
RTN3-201ENST00000338850 SUPT16HQ9Y5B9 1047 aaKnown RBP15.13■□□□□ 0.01
RTN3-201ENST00000338850 EID1Q9Y6B2 187 aa15.13■□□□□ 0.01
RTN3-201ENST00000338850 ILDR2Q71H61 639 aa15.12■□□□□ 0.01
RTN3-201ENST00000338850 STAG3Q9UJ98 1225 aa15.12■□□□□ 0.01
RTN3-201ENST00000338850 ALKQ9UM73 1620 aa15.12■□□□□ 0.01
RTN3-201ENST00000338850 KDM5AP29375 1690 aaKnown RBP15.12■□□□□ 0.01
RTN3-201ENST00000338850 HSPA1LP34931 641 aa15.1■□□□□ 0.01
RTN3-201ENST00000338850 ADGRB3O60242 1522 aa15.09■□□□□ 0.01
RTN3-201ENST00000338850 ANP32CO43423 234 aa15.09■□□□□ 0.01
RTN3-201ENST00000338850 SLC52A1Q9NWF4 448 aa15.09■□□□□ 0.01
RTN3-201ENST00000338850 UNC13BO14795 1591 aa15.08■□□□□ 0
RTN3-201ENST00000338850 TET3O43151 1660 aa15.08■□□□□ 0
RTN3-201ENST00000338850 DDX10Q13206 875 aaKnown RBP15.07■□□□□ 0
RTN3-201ENST00000338850 ANKRD30BQ9BXX2 1392 aa15.07■□□□□ 0
RTN3-201ENST00000338850 ZFYVE9O95405 1425 aa15.03■□□□□ -0
RTN3-201ENST00000338850 SLC26A8Q96RN1 970 aa15.03■□□□□ -0
RTN3-201ENST00000338850 KCNA6P17658 529 aa15.02■□□□□ -0
RTN3-201ENST00000338850 MPHOSPH9Q99550 1183 aa15.02■□□□□ -0
RTN3-201ENST00000338850 IQGAP3Q86VI3 1631 aa15.02□□□□□ -0.01
RTN3-201ENST00000338850 XIRP1Q702N8 1843 aaKnown RBP15.01□□□□□ -0.01
RTN3-201ENST00000338850 RIMS2Q9UQ26 1411 aa15□□□□□ -0.01
RTN3-201ENST00000338850 E9PCH4 1651 aa15□□□□□ -0.01
RTN3-201ENST00000338850 TMEM131LA2VDJ0 1609 aa15□□□□□ -0.01
RTN3-201ENST00000338850 SOCS7O14512 581 aa15□□□□□ -0.01
RTN3-201ENST00000338850 SPATA31E1Q6ZUB1 1445 aa15□□□□□ -0.01
RTN3-201ENST00000338850 NUP155O75694 1391 aa14.99□□□□□ -0.01
RTN3-201ENST00000338850 TMEM94Q12767 1356 aa14.99□□□□□ -0.01
RTN3-201ENST00000338850 PLEKHG1Q9ULL1 1385 aa14.99□□□□□ -0.01
RTN3-201ENST00000338850 MED1Q15648 1581 aaPredicted RBP14.99□□□□□ -0.01
RTN3-201ENST00000338850 NWD1Q149M9 1564 aa14.98□□□□□ -0.01
RTN3-201ENST00000338850 MYO5BQ9ULV0 1848 aa14.97□□□□□ -0.01
RTN3-201ENST00000338850 NKTRP30414 1462 aaKnown RBP14.97□□□□□ -0.01
RTN3-201ENST00000338850 EIF4G2P78344 907 aaKnown RBP eCLIP14.97□□□□□ -0.01
RTN3-201ENST00000338850 BCANQ96GW7 911 aa14.97□□□□□ -0.01
RTN3-201ENST00000338850 CHGAP10645 457 aaKnown RBP14.96□□□□□ -0.01
RTN3-201ENST00000338850 HDGFP51858 240 aaKnown RBP14.96□□□□□ -0.01
RTN3-201ENST00000338850 PROSER2Q86WR7 435 aaPredicted RBP14.96□□□□□ -0.01
RTN3-201ENST00000338850 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.95□□□□□ -0.02
RTN3-201ENST00000338850 FAM135BQ49AJ0 1406 aa14.94□□□□□ -0.02
RTN3-201ENST00000338850 RBM33Q96EV2 1170 aaKnown RBP14.94□□□□□ -0.02
RTN3-201ENST00000338850 CCDC7Q96M83 1385 aa14.94□□□□□ -0.02
RTN3-201ENST00000338850 TBX22Q9Y458 520 aa14.93□□□□□ -0.02
RTN3-201ENST00000338850 WASHC2AQ641Q2 1341 aa14.92□□□□□ -0.02
RTN3-201ENST00000338850 ADAMTS13Q76LX8 1427 aa14.92□□□□□ -0.02
RTN3-201ENST00000338850 HSPA5P11021 654 aaKnown RBP14.92□□□□□ -0.02
RTN3-201ENST00000338850 ERICH6BQ5W0A0 696 aa14.92□□□□□ -0.02
RTN3-201ENST00000338850 NUTM2DQ5VT03 806 aaPredicted RBP14.91□□□□□ -0.02
RTN3-201ENST00000338850 TRIM52Q96A61 297 aa14.91□□□□□ -0.02
RTN3-201ENST00000338850 RALGAPBQ86X10 1494 aa14.9□□□□□ -0.02
RTN3-201ENST00000338850 L3MBTL2Q969R5 705 aa14.9□□□□□ -0.02
RTN3-201ENST00000338850 CHD2O14647 1828 aaKnown RBP14.89□□□□□ -0.03
RTN3-201ENST00000338850 MSH6P52701 1360 aa14.89□□□□□ -0.03
RTN3-201ENST00000338850 NEFLP07196 543 aa14.89□□□□□ -0.03
RTN3-201ENST00000338850 DIP2AQ14689 1571 aa14.89□□□□□ -0.03
RTN3-201ENST00000338850 LAMC1P11047 1609 aa14.88□□□□□ -0.03
RTN3-201ENST00000338850 PIK3R4Q99570 1358 aa14.87□□□□□ -0.03
RTN3-201ENST00000338850 SPHKAPQ2M3C7 1700 aa14.87□□□□□ -0.03
RTN3-201ENST00000338850 PHF23Q9BUL5 403 aaPredicted RBP14.87□□□□□ -0.03
RTN3-201ENST00000338850 ROBO1Q9Y6N7 1651 aa14.87□□□□□ -0.03
RTN3-201ENST00000338850 NCOA3Q9Y6Q9 1424 aa14.86□□□□□ -0.03
RTN3-201ENST00000338850 SLAIN2Q9P270 581 aa14.85□□□□□ -0.03
RTN3-201ENST00000338850 ROCK2O75116 1388 aaKnown RBP14.85□□□□□ -0.03
RTN3-201ENST00000338850 TRPM2O94759 1503 aa14.84□□□□□ -0.03
RTN3-201ENST00000338850 TSHZ2Q9NRE2 1034 aa14.84□□□□□ -0.03
RTN3-201ENST00000338850 PTPRUQ92729 1446 aa14.83□□□□□ -0.03
RTN3-201ENST00000338850 SLC4A1APQ9BWU0 796 aaKnown RBP14.83□□□□□ -0.04
RTN3-201ENST00000338850 CLTCL1P53675 1640 aa14.83□□□□□ -0.04
RTN3-201ENST00000338850 SETBP1Q9Y6X0 1596 aa14.82□□□□□ -0.04
RTN3-201ENST00000338850 NRXN3Q9Y4C0 1643 aa14.82□□□□□ -0.04
RTN3-201ENST00000338850 ZNF326Q5BKZ1 582 aaKnown RBP14.82□□□□□ -0.04
RTN3-201ENST00000338850 AMOTL2Q9Y2J4 779 aa14.82□□□□□ -0.04
RTN3-201ENST00000338850 C14orf37Q86TY3 774 aa14.81□□□□□ -0.04
RTN3-201ENST00000338850 HIRIP3Q9BW71 556 aaPredicted RBP14.81□□□□□ -0.04
RTN3-201ENST00000338850 C19orf44Q9H6X5 657 aa14.8□□□□□ -0.04
RTN3-201ENST00000338850 PRKRIP1Q9H875 184 aaPredicted RBP14.8□□□□□ -0.04
RTN3-201ENST00000338850 RGS17Q9UGC6 210 aaPredicted RBP14.8□□□□□ -0.04
RTN3-201ENST00000338850 KTN1Q86UP2 1357 aaKnown RBP14.8□□□□□ -0.04
RTN3-201ENST00000338850 NEXMIFQ5QGS0 1516 aa14.8□□□□□ -0.04
RTN3-201ENST00000338850 FKBP8Q14318 412 aa14.79□□□□□ -0.04
RTN3-201ENST00000338850 NBPF8Q3BBV2 869 aa14.79□□□□□ -0.04
RTN3-201ENST00000338850 CADPS2Q86UW7 1296 aa14.79□□□□□ -0.04
RTN3-201ENST00000338850 XRN1Q8IZH2 1706 aaKnown RBP14.78□□□□□ -0.04
RTN3-201ENST00000338850 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.78□□□□□ -0.04
RTN3-201ENST00000338850 METP08581 1390 aa14.78□□□□□ -0.04
RTN3-201ENST00000338850 ZBED9Q6R2W3 1325 aa14.78□□□□□ -0.04
RTN3-201ENST00000338850 KIF7Q2M1P5 1343 aa14.77□□□□□ -0.04
RTN3-201ENST00000338850 ATF3P18847 181 aa14.77□□□□□ -0.05
RTN3-201ENST00000338850 TRPM1Q7Z4N2 1603 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 163.4 ms