RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 STAG3Q9UJ98 1225 aa20.81■□□□□ 0.92
CDK5RAP3-201ENST00000338399 PLPPR3Q6T4P5 718 aa20.8■□□□□ 0.92
CDK5RAP3-201ENST00000338399 NEXMIFQ5QGS0 1516 aa20.8■□□□□ 0.92
CDK5RAP3-201ENST00000338399 DIEXFQ68CQ4 756 aaKnown RBP20.79■□□□□ 0.92
CDK5RAP3-201ENST00000338399 RIMS1Q86UR5 1692 aaKnown RBP20.79■□□□□ 0.92
CDK5RAP3-201ENST00000338399 USP47Q96K76 1375 aa20.79■□□□□ 0.92
CDK5RAP3-201ENST00000338399 ADAMTSL3P82987 1691 aa20.79■□□□□ 0.92
CDK5RAP3-201ENST00000338399 NRXN1Q9ULB1 1477 aa20.78■□□□□ 0.92
CDK5RAP3-201ENST00000338399 GPRASP1Q5JY77 1395 aa20.78■□□□□ 0.92
CDK5RAP3-201ENST00000338399 NUTM2DQ5VT03 806 aaPredicted RBP20.77■□□□□ 0.92
CDK5RAP3-201ENST00000338399 KIAA1210Q9ULL0 1709 aa20.76■□□□□ 0.91
CDK5RAP3-201ENST00000338399 A2ML1A8K2U0 1454 aa20.76■□□□□ 0.91
CDK5RAP3-201ENST00000338399 LAMC1P11047 1609 aa20.75■□□□□ 0.91
CDK5RAP3-201ENST00000338399 VGFO15240 615 aaPredicted RBP20.75■□□□□ 0.91
CDK5RAP3-201ENST00000338399 CFAP70Q5T0N1 1121 aa20.73■□□□□ 0.91
CDK5RAP3-201ENST00000338399 PIK3C2GO75747 1445 aa20.72■□□□□ 0.91
CDK5RAP3-201ENST00000338399 UBR1Q8IWV7 1749 aa20.71■□□□□ 0.91
CDK5RAP3-201ENST00000338399 ZFYVE9O95405 1425 aa20.7■□□□□ 0.91
CDK5RAP3-201ENST00000338399 NLRP1Q9C000 1473 aa20.7■□□□□ 0.9
CDK5RAP3-201ENST00000338399 KDM5AP29375 1690 aaKnown RBP20.7■□□□□ 0.9
CDK5RAP3-201ENST00000338399 ST20-MTHFSA0A0A6YYL1 179 aa20.69■□□□□ 0.9
CDK5RAP3-201ENST00000338399 RIMS2Q9UQ26 1411 aa20.68■□□□□ 0.9
CDK5RAP3-201ENST00000338399 C14orf93Q9H972 538 aaKnown RBP20.68■□□□□ 0.9
CDK5RAP3-201ENST00000338399 IQGAP1P46940 1657 aa20.67■□□□□ 0.9
CDK5RAP3-201ENST00000338399 C11orf95C9JLR9 678 aaPredicted RBP20.67■□□□□ 0.9
CDK5RAP3-201ENST00000338399 SENP3Q9H4L4 574 aaPredicted RBP20.66■□□□□ 0.9
CDK5RAP3-201ENST00000338399 DDX10Q13206 875 aaKnown RBP20.65■□□□□ 0.9
CDK5RAP3-201ENST00000338399 WASHC2AQ641Q2 1341 aa20.65■□□□□ 0.9
CDK5RAP3-201ENST00000338399 MYO3AQ8NEV4 1616 aa20.65■□□□□ 0.9
CDK5RAP3-201ENST00000338399 SCAF11Q99590 1463 aaKnown RBP20.64■□□□□ 0.9
CDK5RAP3-201ENST00000338399 SETBP1Q9Y6X0 1596 aa20.64■□□□□ 0.9
CDK5RAP3-201ENST00000338399 POLR1AO95602 1720 aaPredicted RBP20.64■□□□□ 0.9
CDK5RAP3-201ENST00000338399 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.62■□□□□ 0.89
CDK5RAP3-201ENST00000338399 CCDC7Q96M83 1385 aa20.61■□□□□ 0.89
CDK5RAP3-201ENST00000338399 TMEM2Q9UHN6 1383 aa20.61■□□□□ 0.89
CDK5RAP3-201ENST00000338399 TMEM132EQ6IEE7 984 aa20.61■□□□□ 0.89
CDK5RAP3-201ENST00000338399 ADGRB1O14514 1584 aa20.6■□□□□ 0.89
CDK5RAP3-201ENST00000338399 KIF7Q2M1P5 1343 aa20.6■□□□□ 0.89
CDK5RAP3-201ENST00000338399 HDGFP51858 240 aaKnown RBP20.6■□□□□ 0.89
CDK5RAP3-201ENST00000338399 PTPRMP28827 1452 aa20.58■□□□□ 0.89
CDK5RAP3-201ENST00000338399 SETD1BQ9UPS6 1966 aaKnown RBP20.58■□□□□ 0.89
CDK5RAP3-201ENST00000338399 ALKQ9UM73 1620 aa20.57■□□□□ 0.88
CDK5RAP3-201ENST00000338399 CEP170BQ9Y4F5 1589 aaPredicted RBP20.57■□□□□ 0.88
CDK5RAP3-201ENST00000338399 EIF3AQ14152 1382 aaKnown RBP20.57■□□□□ 0.88
CDK5RAP3-201ENST00000338399 TESK2Q96S53 571 aa20.56■□□□□ 0.88
CDK5RAP3-201ENST00000338399 THEMISQ8N1K5 641 aaPredicted RBP20.56■□□□□ 0.88
CDK5RAP3-201ENST00000338399 TRAK1Q9UPV9 953 aa20.55■□□□□ 0.88
CDK5RAP3-201ENST00000338399 ASXL1Q8IXJ9 1541 aa20.55■□□□□ 0.88
CDK5RAP3-201ENST00000338399 POLR3GLQ9BT43 218 aa20.54■□□□□ 0.88
CDK5RAP3-201ENST00000338399 SLIT1O75093 1534 aa20.54■□□□□ 0.88
CDK5RAP3-201ENST00000338399 LTKP29376 864 aa20.54■□□□□ 0.88
CDK5RAP3-201ENST00000338399 NRXN3Q9Y4C0 1643 aa20.54■□□□□ 0.88
CDK5RAP3-201ENST00000338399 ARHGAP23Q9P227 1491 aa20.53■□□□□ 0.88
CDK5RAP3-201ENST00000338399 TXNDC2Q86VQ3 553 aa20.53■□□□□ 0.88
CDK5RAP3-201ENST00000338399 ZNF142P52746 1687 aaPredicted RBP20.52■□□□□ 0.88
CDK5RAP3-201ENST00000338399 SETD1AO15047 1707 aaKnown RBP20.52■□□□□ 0.88
CDK5RAP3-201ENST00000338399 EID1Q9Y6B2 187 aa20.52■□□□□ 0.87
CDK5RAP3-201ENST00000338399 BCANQ96GW7 911 aa20.51■□□□□ 0.87
CDK5RAP3-201ENST00000338399 MIER1Q8N108 512 aa20.5■□□□□ 0.87
CDK5RAP3-201ENST00000338399 DISP3Q9P2K9 1392 aa20.5■□□□□ 0.87
CDK5RAP3-201ENST00000338399 TMF1P82094 1093 aa20.5■□□□□ 0.87
CDK5RAP3-201ENST00000338399 STK26Q9P289 416 aa20.5■□□□□ 0.87
CDK5RAP3-201ENST00000338399 ARHGEF28Q8N1W1 1705 aaKnown RBP20.49■□□□□ 0.87
CDK5RAP3-201ENST00000338399 CENPJQ9HC77 1338 aaPredicted RBP20.48■□□□□ 0.87
CDK5RAP3-201ENST00000338399 PLEKHG1Q9ULL1 1385 aa20.48■□□□□ 0.87
CDK5RAP3-201ENST00000338399 YTHDC2Q9H6S0 1430 aaKnown RBP20.48■□□□□ 0.87
CDK5RAP3-201ENST00000338399 QRICH2Q9H0J4 1663 aa20.46■□□□□ 0.87
CDK5RAP3-201ENST00000338399 ADAMTS13Q76LX8 1427 aa20.44■□□□□ 0.86
CDK5RAP3-201ENST00000338399 KDM4FA0A1W2PPD8 638 aa20.44■□□□□ 0.86
CDK5RAP3-201ENST00000338399 METP08581 1390 aa20.44■□□□□ 0.86
CDK5RAP3-201ENST00000338399 SLC24A1O60721 1099 aa20.42■□□□□ 0.86
CDK5RAP3-201ENST00000338399 LRPPRCP42704 1394 aaKnown RBP20.42■□□□□ 0.86
CDK5RAP3-201ENST00000338399 SBNO2Q9Y2G9 1366 aa20.42■□□□□ 0.86
CDK5RAP3-201ENST00000338399 SLC26A8Q96RN1 970 aa20.4■□□□□ 0.86
CDK5RAP3-201ENST00000338399 MED14O60244 1454 aa20.4■□□□□ 0.86
CDK5RAP3-201ENST00000338399 SAFB2Q14151 953 aaKnown RBP eCLIP20.39■□□□□ 0.86
CDK5RAP3-201ENST00000338399 CDCA8Q53HL2 280 aa20.39■□□□□ 0.86
CDK5RAP3-201ENST00000338399 ANKLE2Q86XL3 938 aa20.39■□□□□ 0.86
CDK5RAP3-201ENST00000338399 PRAM1Q96QH2 718 aa20.39■□□□□ 0.85
CDK5RAP3-201ENST00000338399 POGKQ9P215 609 aa20.38■□□□□ 0.85
CDK5RAP3-201ENST00000338399 ABCC11Q96J66 1382 aa20.38■□□□□ 0.85
CDK5RAP3-201ENST00000338399 DLC1Q96QB1 1528 aa20.38■□□□□ 0.85
CDK5RAP3-201ENST00000338399 ANP32CO43423 234 aa20.37■□□□□ 0.85
CDK5RAP3-201ENST00000338399 KNDC1Q76NI1 1749 aa20.36■□□□□ 0.85
CDK5RAP3-201ENST00000338399 TBX22Q9Y458 520 aa20.36■□□□□ 0.85
CDK5RAP3-201ENST00000338399 DIP2AQ14689 1571 aa20.35■□□□□ 0.85
CDK5RAP3-201ENST00000338399 WAPLQ7Z5K2 1190 aa20.34■□□□□ 0.85
CDK5RAP3-201ENST00000338399 MINK1Q8N4C8 1332 aaPredicted RBP20.32■□□□□ 0.84
CDK5RAP3-201ENST00000338399 PLEKHH1Q9ULM0 1364 aa20.32■□□□□ 0.84
CDK5RAP3-201ENST00000338399 TECPR2O15040 1411 aa20.32■□□□□ 0.84
CDK5RAP3-201ENST00000338399 TULP4Q9NRJ4 1543 aa20.32■□□□□ 0.84
CDK5RAP3-201ENST00000338399 EVC2Q86UK5 1308 aa20.32■□□□□ 0.84
CDK5RAP3-201ENST00000338399 PTPRUQ92729 1446 aa20.32■□□□□ 0.84
CDK5RAP3-201ENST00000338399 CPS1P31327 1500 aa20.31■□□□□ 0.84
CDK5RAP3-201ENST00000338399 MYOM1P52179 1685 aa20.31■□□□□ 0.84
CDK5RAP3-201ENST00000338399 SIRT1Q96EB6 747 aa20.3■□□□□ 0.84
CDK5RAP3-201ENST00000338399 PANK3Q9H999 370 aa20.29■□□□□ 0.84
CDK5RAP3-201ENST00000338399 FAM135BQ49AJ0 1406 aa20.28■□□□□ 0.84
CDK5RAP3-201ENST00000338399 NCKAP5LQ9HCH0 1330 aa20.28■□□□□ 0.84
CDK5RAP3-201ENST00000338399 ROBO2Q9HCK4 1378 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms