RNA–Protein interactions for RNA: ENST00000337304.2

ATF4-201, Transcript of activating transcription factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATF4, Length 2,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4-201ENST00000337304 ARID4BQ4LE39 1312 aaPredicted RBP36.36■■■■□ 3.41
ATF4-201ENST00000337304 NRXN1Q9ULB1 1477 aa36.36■■■■□ 3.41
ATF4-201ENST00000337304 ST20-MTHFSA0A0A6YYL1 179 aa36.35■■■■□ 3.41
ATF4-201ENST00000337304 ADGRF5Q8IZF2 1346 aa36.34■■■■□ 3.41
ATF4-201ENST00000337304 RPGRIP1LQ68CZ1 1315 aa36.33■■■■□ 3.41
ATF4-201ENST00000337304 SPATA31D1Q6ZQQ2 1576 aa36.32■■■■□ 3.4
ATF4-201ENST00000337304 MYO5BQ9ULV0 1848 aa36.31■■■■□ 3.4
ATF4-201ENST00000337304 TMEM131LA2VDJ0 1609 aa36.3■■■■□ 3.4
ATF4-201ENST00000337304 IQGAP1P46940 1657 aa36.29■■■■□ 3.4
ATF4-201ENST00000337304 ESF1Q9H501 851 aaKnown RBP36.28■■■■□ 3.4
ATF4-201ENST00000337304 NEXMIFQ5QGS0 1516 aa36.27■■■■□ 3.4
ATF4-201ENST00000337304 ZMYM3Q14202 1370 aa36.26■■■■□ 3.39
ATF4-201ENST00000337304 CFAP70Q5T0N1 1121 aa36.22■■■■□ 3.39
ATF4-201ENST00000337304 PIK3C2GO75747 1445 aa36.21■■■■□ 3.39
ATF4-201ENST00000337304 SCAF11Q99590 1463 aaKnown RBP36.19■■■■□ 3.38
ATF4-201ENST00000337304 ANP32CO43423 234 aa36.15■■■■□ 3.38
ATF4-201ENST00000337304 TESK2Q96S53 571 aa36.15■■■■□ 3.38
ATF4-201ENST00000337304 SETBP1Q9Y6X0 1596 aa36.14■■■■□ 3.38
ATF4-201ENST00000337304 VGFO15240 615 aaPredicted RBP36.13■■■■□ 3.38
ATF4-201ENST00000337304 ZFYVE9O95405 1425 aa36.12■■■■□ 3.37
ATF4-201ENST00000337304 POLR3GLQ9BT43 218 aa36.1■■■■□ 3.37
ATF4-201ENST00000337304 C14orf93Q9H972 538 aaKnown RBP36.1■■■■□ 3.37
ATF4-201ENST00000337304 NUTM2DQ5VT03 806 aaPredicted RBP36.1■■■■□ 3.37
ATF4-201ENST00000337304 FER1L4A9Z1Z3 1794 aa36.07■■■■□ 3.36
ATF4-201ENST00000337304 A2ML1A8K2U0 1454 aa36.07■■■■□ 3.36
ATF4-201ENST00000337304 STAG3Q9UJ98 1225 aa36.06■■■■□ 3.36
ATF4-201ENST00000337304 EIF3AQ14152 1382 aaKnown RBP36.05■■■■□ 3.36
ATF4-201ENST00000337304 ADGRB1O14514 1584 aa36.05■■■■□ 3.36
ATF4-201ENST00000337304 DISP3Q9P2K9 1392 aa36.03■■■■□ 3.36
ATF4-201ENST00000337304 TNRQ92752 1358 aa36.03■■■■□ 3.36
ATF4-201ENST00000337304 C3P01024 1663 aa36■■■■□ 3.35
ATF4-201ENST00000337304 TMF1P82094 1093 aa35.99■■■■□ 3.35
ATF4-201ENST00000337304 MYO3AQ8NEV4 1616 aa35.97■■■■□ 3.35
ATF4-201ENST00000337304 CCER2I3L3R5 266 aa35.96■■■■□ 3.35
ATF4-201ENST00000337304 YTHDC1Q96MU7 727 aaKnown RBP35.96■■■■□ 3.35
ATF4-201ENST00000337304 KDM5AP29375 1690 aaKnown RBP35.95■■■■□ 3.34
ATF4-201ENST00000337304 TMEM132EQ6IEE7 984 aa35.93■■■■□ 3.34
ATF4-201ENST00000337304 CEBPAP49715 358 aaPredicted RBP35.92■■■■□ 3.34
ATF4-201ENST00000337304 RIMS2Q9UQ26 1411 aa35.92■■■■□ 3.34
ATF4-201ENST00000337304 UBR1Q8IWV7 1749 aa35.9■■■■□ 3.34
ATF4-201ENST00000337304 ASXL1Q8IXJ9 1541 aa35.88■■■■□ 3.33
ATF4-201ENST00000337304 TRAK1Q9UPV9 953 aa35.86■■■■□ 3.33
ATF4-201ENST00000337304 PRKRIP1Q9H875 184 aaPredicted RBP35.86■■■■□ 3.33
ATF4-201ENST00000337304 NLRP1Q9C000 1473 aa35.86■■■■□ 3.33
ATF4-201ENST00000337304 ALKQ9UM73 1620 aa35.84■■■■□ 3.33
ATF4-201ENST00000337304 ARHGEF28Q8N1W1 1705 aaKnown RBP35.83■■■■□ 3.33
ATF4-201ENST00000337304 SENP3Q9H4L4 574 aaPredicted RBP35.83■■■■□ 3.33
ATF4-201ENST00000337304 SBNO2Q9Y2G9 1366 aa35.82■■■■□ 3.33
ATF4-201ENST00000337304 CENPJQ9HC77 1338 aaPredicted RBP35.82■■■■□ 3.32
ATF4-201ENST00000337304 QRICH2Q9H0J4 1663 aa35.82■■■■□ 3.32
ATF4-201ENST00000337304 SLC24A1O60721 1099 aa35.81■■■■□ 3.32
ATF4-201ENST00000337304 CDCA8Q53HL2 280 aa35.8■■■■□ 3.32
ATF4-201ENST00000337304 ABCF1Q8NE71 845 aaKnown RBP eCLIP35.79■■■■□ 3.32
ATF4-201ENST00000337304 RIMS1Q86UR5 1692 aaKnown RBP35.78■■■■□ 3.32
ATF4-201ENST00000337304 SETD1AO15047 1707 aaKnown RBP35.76■■■■□ 3.32
ATF4-201ENST00000337304 CENPBP07199 599 aaPredicted RBP35.76■■■■□ 3.31
ATF4-201ENST00000337304 PLPPR3Q6T4P5 718 aa35.74■■■■□ 3.31
ATF4-201ENST00000337304 ADAMTSL3P82987 1691 aa35.74■■■■□ 3.31
ATF4-201ENST00000337304 TMEM2Q9UHN6 1383 aa35.74■■■■□ 3.31
ATF4-201ENST00000337304 NRXN3Q9Y4C0 1643 aa35.74■■■■□ 3.31
ATF4-201ENST00000337304 PTPRMP28827 1452 aa35.73■■■■□ 3.31
ATF4-201ENST00000337304 MYOM1P52179 1685 aa35.72■■■■□ 3.31
ATF4-201ENST00000337304 HDGFP51858 240 aaKnown RBP35.71■■■■□ 3.31
ATF4-201ENST00000337304 YTHDC2Q9H6S0 1430 aaKnown RBP35.71■■■■□ 3.31
ATF4-201ENST00000337304 PER1O15534 1290 aaPredicted RBP35.69■■■■□ 3.3
ATF4-201ENST00000337304 PANK3Q9H999 370 aa35.68■■■■□ 3.3
ATF4-201ENST00000337304 STK26Q9P289 416 aa35.67■■■■□ 3.3
ATF4-201ENST00000337304 CNGB1Q14028 1251 aaPredicted RBP35.62■■■■□ 3.29
ATF4-201ENST00000337304 SLIT1O75093 1534 aa35.6■■■■□ 3.29
ATF4-201ENST00000337304 CCDC184Q52MB2 194 aa35.6■■■■□ 3.29
ATF4-201ENST00000337304 ARHGAP23Q9P227 1491 aa35.59■■■■□ 3.29
ATF4-201ENST00000337304 KTN1Q86UP2 1357 aaKnown RBP35.57■■■■□ 3.29
ATF4-201ENST00000337304 LTKP29376 864 aa35.57■■■■□ 3.28
ATF4-201ENST00000337304 LRPPRCP42704 1394 aaKnown RBP35.57■■■■□ 3.28
ATF4-201ENST00000337304 TULP4Q9NRJ4 1543 aa35.56■■■■□ 3.28
ATF4-201ENST00000337304 DLC1Q96QB1 1528 aa35.56■■■■□ 3.28
ATF4-201ENST00000337304 METP08581 1390 aa35.54■■■■□ 3.28
ATF4-201ENST00000337304 PLEKHG1Q9ULL1 1385 aa35.54■■■■□ 3.28
ATF4-201ENST00000337304 CEP170BQ9Y4F5 1589 aaPredicted RBP35.54■■■■□ 3.28
ATF4-201ENST00000337304 PRAM1Q96QH2 718 aa35.53■■■■□ 3.28
ATF4-201ENST00000337304 SAFB2Q14151 953 aaKnown RBP eCLIP35.52■■■■□ 3.28
ATF4-201ENST00000337304 RALBP1Q15311 655 aa35.52■■■■□ 3.28
ATF4-201ENST00000337304 TXNDC2Q86VQ3 553 aa35.52■■■■□ 3.28
ATF4-201ENST00000337304 THEMISQ8N1K5 641 aaPredicted RBP35.52■■■■□ 3.28
ATF4-201ENST00000337304 EVC2Q86UK5 1308 aa35.52■■■■□ 3.28
ATF4-201ENST00000337304 MRS2Q9HD23 443 aa35.51■■■■□ 3.28
ATF4-201ENST00000337304 ABCC11Q96J66 1382 aa35.51■■■■□ 3.27
ATF4-201ENST00000337304 ADAMTS13Q76LX8 1427 aa35.5■■■■□ 3.27
ATF4-201ENST00000337304 POGKQ9P215 609 aa35.5■■■■□ 3.27
ATF4-201ENST00000337304 EID1Q9Y6B2 187 aa35.5■■■■□ 3.27
ATF4-201ENST00000337304 PARD3Q8TEW0 1356 aa35.5■■■■□ 3.27
ATF4-201ENST00000337304 BCANQ96GW7 911 aa35.49■■■■□ 3.27
ATF4-201ENST00000337304 PUS7Q96PZ0 661 aaKnown RBP35.49■■■■□ 3.27
ATF4-201ENST00000337304 KNDC1Q76NI1 1749 aa35.48■■■■□ 3.27
ATF4-201ENST00000337304 ZNF142P52746 1687 aaPredicted RBP35.46■■■■□ 3.27
ATF4-201ENST00000337304 KNSTRNQ9Y448 316 aa35.45■■■■□ 3.27
ATF4-201ENST00000337304 SETD1BQ9UPS6 1966 aaKnown RBP35.44■■■■□ 3.26
ATF4-201ENST00000337304 MYBBP1AQ9BQG0 1328 aaKnown RBP35.44■■■■□ 3.26
ATF4-201ENST00000337304 MED14O60244 1454 aa35.43■■■■□ 3.26
ATF4-201ENST00000337304 CC2D1BQ5T0F9 858 aaKnown RBP35.43■■■■□ 3.26
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms