RNA–Protein interactions for RNA: ENST00000328736.7

PTPN21-201, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,089 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-201ENST00000328736 IPO7O95373 1038 aaKnown RBP18.88■□□□□ 0.61
PTPN21-201ENST00000328736 MCTP1Q6DN14 999 aa18.88■□□□□ 0.61
PTPN21-201ENST00000328736 PCMTD1Q96MG8 357 aaPredicted RBP18.88■□□□□ 0.61
PTPN21-201ENST00000328736 ZKSCAN2Q63HK3 967 aa18.88■□□□□ 0.61
PTPN21-201ENST00000328736 CENPQQ7L2Z9 268 aaPredicted RBP18.88■□□□□ 0.61
PTPN21-201ENST00000328736 EXOC6Q8TAG9 804 aa18.88■□□□□ 0.61
PTPN21-201ENST00000328736 VPS37DQ86XT2 251 aa18.87■□□□□ 0.61
PTPN21-201ENST00000328736 C9orf78Q9NZ63 289 aaPredicted RBP18.87■□□□□ 0.61
PTPN21-201ENST00000328736 CWC22Q9HCG8 908 aaKnown RBP18.87■□□□□ 0.61
PTPN21-201ENST00000328736 VGFO15240 615 aaPredicted RBP18.87■□□□□ 0.61
PTPN21-201ENST00000328736 MEX3CQ5U5Q3 659 aaKnown RBP18.87■□□□□ 0.61
PTPN21-201ENST00000328736 CCAR2Q8N163 923 aaKnown RBP18.87■□□□□ 0.61
PTPN21-201ENST00000328736 JPH4Q96JJ6 628 aa18.87■□□□□ 0.61
PTPN21-201ENST00000328736 CCDC144AA2RUR9 1427 aa18.87■□□□□ 0.61
PTPN21-201ENST00000328736 DDX58O95786 925 aaKnown RBP18.87■□□□□ 0.61
PTPN21-201ENST00000328736 ZKSCAN1P17029 563 aaPredicted RBP18.87■□□□□ 0.61
PTPN21-201ENST00000328736 E9PSI1 815 aa18.86■□□□□ 0.61
PTPN21-201ENST00000328736 CNKSR2Q8WXI2 1034 aa18.86■□□□□ 0.61
PTPN21-201ENST00000328736 CRBNQ96SW2 442 aa18.86■□□□□ 0.61
PTPN21-201ENST00000328736 ANO8Q9HCE9 1232 aaPredicted RBP18.86■□□□□ 0.61
PTPN21-201ENST00000328736 CADPSQ9ULU8 1353 aa18.86■□□□□ 0.61
PTPN21-201ENST00000328736 WWC1Q8IX03 1113 aa18.86■□□□□ 0.61
PTPN21-201ENST00000328736 DHX16O60231 1041 aaKnown RBP18.85■□□□□ 0.61
PTPN21-201ENST00000328736 ROCK1Q13464 1354 aa18.85■□□□□ 0.61
PTPN21-201ENST00000328736 TRDNQ13061 729 aa18.84■□□□□ 0.61
PTPN21-201ENST00000328736 IFIT2P09913 472 aaKnown RBP18.84■□□□□ 0.61
PTPN21-201ENST00000328736 DDX49Q9Y6V7 483 aaKnown RBP18.84■□□□□ 0.61
PTPN21-201ENST00000328736 CPLX1O14810 134 aa18.84■□□□□ 0.61
PTPN21-201ENST00000328736 CCDC43Q96MW1 224 aaKnown RBP18.84■□□□□ 0.61
PTPN21-201ENST00000328736 ERICH2A1L162 156 aa18.84■□□□□ 0.61
PTPN21-201ENST00000328736 APPP05067 770 aa18.83■□□□□ 0.61
PTPN21-201ENST00000328736 REC8O95072 547 aa18.83■□□□□ 0.6
PTPN21-201ENST00000328736 ANO2Q9NQ90 1003 aa18.83■□□□□ 0.6
PTPN21-201ENST00000328736 FBXW7Q969H0 707 aa18.83■□□□□ 0.6
PTPN21-201ENST00000328736 RNF20Q5VTR2 975 aa18.83■□□□□ 0.6
PTPN21-201ENST00000328736 FOXD4L6Q3SYB3 417 aaPredicted RBP18.82■□□□□ 0.6
PTPN21-201ENST00000328736 FOXD4L3Q6VB84 417 aaPredicted RBP18.82■□□□□ 0.6
PTPN21-201ENST00000328736 FAM161AQ3B820 660 aa18.82■□□□□ 0.6
PTPN21-201ENST00000328736 NGEFQ8N5V2 710 aa18.82■□□□□ 0.6
PTPN21-201ENST00000328736 MINK1Q8N4C8 1332 aaPredicted RBP18.81■□□□□ 0.6
PTPN21-201ENST00000328736 EIF2S2P20042 333 aaKnown RBP18.81■□□□□ 0.6
PTPN21-201ENST00000328736 NECTIN2Q92692 538 aa18.8■□□□□ 0.6
PTPN21-201ENST00000328736 SMARCA4P51532 1647 aa18.8■□□□□ 0.6
PTPN21-201ENST00000328736 USP47Q96K76 1375 aa18.8■□□□□ 0.6
PTPN21-201ENST00000328736 NFXL1Q6ZNB6 911 aa18.79■□□□□ 0.6
PTPN21-201ENST00000328736 COG6Q9Y2V7 657 aa18.79■□□□□ 0.6
PTPN21-201ENST00000328736 PRKRIP1Q9H875 184 aaPredicted RBP18.79■□□□□ 0.6
PTPN21-201ENST00000328736 G3BP1Q13283 466 aaKnown RBP eCLIP18.78■□□□□ 0.6
PTPN21-201ENST00000328736 API5Q9BZZ5 524 aaKnown RBP18.78■□□□□ 0.6
PTPN21-201ENST00000328736 RRP1P56182 461 aaKnown RBP18.78■□□□□ 0.6
PTPN21-201ENST00000328736 DDX19BQ9UMR2 479 aa18.78■□□□□ 0.6
PTPN21-201ENST00000328736 ATAD2BQ9ULI0 1458 aa18.77■□□□□ 0.6
PTPN21-201ENST00000328736 RBM33Q96EV2 1170 aaKnown RBP18.77■□□□□ 0.6
PTPN21-201ENST00000328736 SYTL4Q96C24 671 aaPredicted RBP18.76■□□□□ 0.59
PTPN21-201ENST00000328736 PSME1Q06323 249 aa18.76■□□□□ 0.59
PTPN21-201ENST00000328736 HSP90AB4PQ58FF6 505 aa18.75■□□□□ 0.59
PTPN21-201ENST00000328736 DIAPH1O60610 1272 aaKnown RBP18.75■□□□□ 0.59
PTPN21-201ENST00000328736 PDE4AP27815 886 aa18.75■□□□□ 0.59
PTPN21-201ENST00000328736 FANCD2Q9BXW9 1451 aa18.75■□□□□ 0.59
PTPN21-201ENST00000328736 APAF1O14727 1248 aa18.75■□□□□ 0.59
PTPN21-201ENST00000328736 SAFBQ15424 915 aaKnown RBP eCLIP18.75■□□□□ 0.59
PTPN21-201ENST00000328736 ZNF644Q9H582 1327 aaPredicted RBP18.75■□□□□ 0.59
PTPN21-201ENST00000328736 CDR1P51861 262 aa18.74■□□□□ 0.59
PTPN21-201ENST00000328736 BICD2Q8TD16 824 aa18.74■□□□□ 0.59
PTPN21-201ENST00000328736 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.73■□□□□ 0.59
PTPN21-201ENST00000328736 WASHC2AQ641Q2 1341 aa18.73■□□□□ 0.59
PTPN21-201ENST00000328736 ERC2O15083 957 aa18.72■□□□□ 0.59
PTPN21-201ENST00000328736 ZNF592Q92610 1267 aa18.72■□□□□ 0.59
PTPN21-201ENST00000328736 CT47A1Q5JQC4 288 aaPredicted RBP18.71■□□□□ 0.59
PTPN21-201ENST00000328736 R3HCC1Q9Y3T6 440 aaKnown RBP18.71■□□□□ 0.59
PTPN21-201ENST00000328736 PATL2C9JE40 543 aaKnown RBP18.71■□□□□ 0.59
PTPN21-201ENST00000328736 ODF2Q5BJF6 829 aa18.71■□□□□ 0.59
PTPN21-201ENST00000328736 BRMS1Q9HCU9 246 aa18.71■□□□□ 0.59
PTPN21-201ENST00000328736 PRDM2Q13029 1718 aa18.71■□□□□ 0.59
PTPN21-201ENST00000328736 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.71■□□□□ 0.59
PTPN21-201ENST00000328736 RAD54L2Q9Y4B4 1467 aa18.7■□□□□ 0.58
PTPN21-201ENST00000328736 TEX35Q5T0J7 233 aa18.7■□□□□ 0.58
PTPN21-201ENST00000328736 HOMER1Q86YM7 354 aa18.7■□□□□ 0.58
PTPN21-201ENST00000328736 FKBP5Q13451 457 aaPredicted RBP18.69■□□□□ 0.58
PTPN21-201ENST00000328736 RRP12Q5JTH9 1297 aaKnown RBP18.69■□□□□ 0.58
PTPN21-201ENST00000328736 SASS6Q6UVJ0 657 aa18.69■□□□□ 0.58
PTPN21-201ENST00000328736 INTS3Q68E01 1043 aaKnown RBP18.68■□□□□ 0.58
PTPN21-201ENST00000328736 AK7Q96M32 723 aa18.68■□□□□ 0.58
PTPN21-201ENST00000328736 FBXO3Q9UK99 471 aa18.68■□□□□ 0.58
PTPN21-201ENST00000328736 RUFY1Q96T51 708 aa18.68■□□□□ 0.58
PTPN21-201ENST00000328736 SMC3Q9UQE7 1217 aa18.68■□□□□ 0.58
PTPN21-201ENST00000328736 RIPK4P57078 832 aa18.67■□□□□ 0.58
PTPN21-201ENST00000328736 HSP90AA2PQ14568 343 aaPredicted RBP18.67■□□□□ 0.58
PTPN21-201ENST00000328736 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.67■□□□□ 0.58
PTPN21-201ENST00000328736 DCAF8L1A6NGE4 600 aa18.67■□□□□ 0.58
PTPN21-201ENST00000328736 RAPGEF4Q8WZA2 1011 aa18.67■□□□□ 0.58
PTPN21-201ENST00000328736 RALYLQ86SE5 291 aaKnown RBP18.67■□□□□ 0.58
PTPN21-201ENST00000328736 DZIP1LQ8IYY4 767 aaKnown RBP18.67■□□□□ 0.58
PTPN21-201ENST00000328736 NAP1L1P55209 391 aaKnown RBP18.67■□□□□ 0.58
PTPN21-201ENST00000328736 ZBED9Q6R2W3 1325 aa18.67■□□□□ 0.58
PTPN21-201ENST00000328736 XBP1P17861 261 aa18.67■□□□□ 0.58
PTPN21-201ENST00000328736 ACBD3Q9H3P7 528 aa18.67■□□□□ 0.58
PTPN21-201ENST00000328736 AEBP2Q6ZN18 517 aaPredicted RBP18.66■□□□□ 0.58
PTPN21-201ENST00000328736 CCDC73Q6ZRK6 1079 aa18.66■□□□□ 0.58
PTPN21-201ENST00000328736 RSPH6AQ9H0K4 717 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 158.6 ms