RNA–Protein interactions for RNA: ENST00000328111.6

DNMT3B-202, Transcript of DNA methyltransferase 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DNMT3B, Length 4,336 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-202ENST00000328111 SLC12A5Q9H2X9 1139 aa17.38■□□□□ 0.37
DNMT3B-202ENST00000328111 PANK1Q8TE04 598 aa17.38■□□□□ 0.37
DNMT3B-202ENST00000328111 THOC2Q8NI27 1593 aaKnown RBP17.37■□□□□ 0.37
DNMT3B-202ENST00000328111 SMG6Q86US8 1419 aaKnown RBP17.36■□□□□ 0.37
DNMT3B-202ENST00000328111 TCP11L2Q8N4U5 519 aa17.36■□□□□ 0.37
DNMT3B-202ENST00000328111 RIPK4P57078 832 aa17.35■□□□□ 0.37
DNMT3B-202ENST00000328111 DIAPH1O60610 1272 aaKnown RBP17.35■□□□□ 0.37
DNMT3B-202ENST00000328111 NGDNQ8NEJ9 315 aaKnown RBP17.35■□□□□ 0.37
DNMT3B-202ENST00000328111 SLC4A10Q6U841 1118 aa17.35■□□□□ 0.37
DNMT3B-202ENST00000328111 ERBINQ96RT1 1412 aa17.34■□□□□ 0.37
DNMT3B-202ENST00000328111 LMOD3Q0VAK6 560 aa17.32■□□□□ 0.36
DNMT3B-202ENST00000328111 DZIP1LQ8IYY4 767 aaKnown RBP17.32■□□□□ 0.36
DNMT3B-202ENST00000328111 PLEKHH2Q8IVE3 1493 aa17.32■□□□□ 0.36
DNMT3B-202ENST00000328111 CCDC141Q6ZP82 1450 aa17.32■□□□□ 0.36
DNMT3B-202ENST00000328111 COG3Q96JB2 828 aa17.32■□□□□ 0.36
DNMT3B-202ENST00000328111 BCAR3O75815 825 aa17.31■□□□□ 0.36
DNMT3B-202ENST00000328111 LTV1Q96GA3 475 aaPredicted RBP17.31■□□□□ 0.36
DNMT3B-202ENST00000328111 STK31Q9BXU1 1019 aa17.31■□□□□ 0.36
DNMT3B-202ENST00000328111 KCNJ4P48050 445 aa17.3■□□□□ 0.36
DNMT3B-202ENST00000328111 AMPHP49418 695 aa17.3■□□□□ 0.36
DNMT3B-202ENST00000328111 UGGT2Q9NYU1 1516 aa17.3■□□□□ 0.36
DNMT3B-202ENST00000328111 ANKRD45Q5TZF3 282 aa17.3■□□□□ 0.36
DNMT3B-202ENST00000328111 USP35Q9P2H5 1018 aa17.3■□□□□ 0.36
DNMT3B-202ENST00000328111 EID1Q9Y6B2 187 aa17.3■□□□□ 0.36
DNMT3B-202ENST00000328111 FOXD4L1Q9NU39 408 aa17.29■□□□□ 0.36
DNMT3B-202ENST00000328111 GPATCH8Q9UKJ3 1502 aaKnown RBP17.29■□□□□ 0.36
DNMT3B-202ENST00000328111 PTMAP06454 111 aaKnown RBP17.29■□□□□ 0.36
DNMT3B-202ENST00000328111 HMOX1P09601 288 aa17.28■□□□□ 0.36
DNMT3B-202ENST00000328111 FAM69CQ0P6D2 419 aa17.28■□□□□ 0.36
DNMT3B-202ENST00000328111 L1TD1Q5T7N2 865 aaKnown RBP17.28■□□□□ 0.36
DNMT3B-202ENST00000328111 DDX19BQ9UMR2 479 aa17.27■□□□□ 0.36
DNMT3B-202ENST00000328111 RAPGEF3O95398 923 aa17.27■□□□□ 0.35
DNMT3B-202ENST00000328111 CFAP44Q96MT7 982 aa17.26■□□□□ 0.35
DNMT3B-202ENST00000328111 MCCP23508 829 aa17.25■□□□□ 0.35
DNMT3B-202ENST00000328111 GBP4Q96PP9 640 aa17.25■□□□□ 0.35
DNMT3B-202ENST00000328111 PLCB2Q00722 1185 aa17.24■□□□□ 0.35
DNMT3B-202ENST00000328111 NAP1L5Q96NT1 182 aaPredicted RBP17.24■□□□□ 0.35
DNMT3B-202ENST00000328111 NUP153P49790 1475 aaKnown RBP17.24■□□□□ 0.35
DNMT3B-202ENST00000328111 HMMRO75330 724 aa17.23■□□□□ 0.35
DNMT3B-202ENST00000328111 BACH2Q9BYV9 841 aa17.23■□□□□ 0.35
DNMT3B-202ENST00000328111 PRAM1Q96QH2 718 aa17.23■□□□□ 0.35
DNMT3B-202ENST00000328111 FGD1P98174 961 aa17.21■□□□□ 0.35
DNMT3B-202ENST00000328111 SKAP1Q86WV1 359 aa17.21■□□□□ 0.35
DNMT3B-202ENST00000328111 LNPKQ9C0E8 428 aa17.21■□□□□ 0.35
DNMT3B-202ENST00000328111 TRIM6-TRIM34B2RNG4 842 aa17.21■□□□□ 0.35
DNMT3B-202ENST00000328111 TSR2Q969E8 191 aaKnown RBP17.21■□□□□ 0.35
DNMT3B-202ENST00000328111 MSH5O43196 834 aa17.2■□□□□ 0.34
DNMT3B-202ENST00000328111 EXOSC9Q06265 439 aaKnown RBP17.2■□□□□ 0.34
DNMT3B-202ENST00000328111 GSE1Q14687 1217 aa17.2■□□□□ 0.34
DNMT3B-202ENST00000328111 KIF14Q15058 1648 aa17.2■□□□□ 0.34
DNMT3B-202ENST00000328111 C20orf194Q5TEA3 1177 aa17.19■□□□□ 0.34
DNMT3B-202ENST00000328111 PDE3AQ14432 1141 aa17.19■□□□□ 0.34
DNMT3B-202ENST00000328111 TAOK2Q9UL54 1235 aa17.18■□□□□ 0.34
DNMT3B-202ENST00000328111 GLIPR1L2Q4G1C9 344 aa17.18■□□□□ 0.34
DNMT3B-202ENST00000328111 KIAA1211Q6ZU35 1233 aa17.18■□□□□ 0.34
DNMT3B-202ENST00000328111 KIF16BQ96L93 1317 aa17.17■□□□□ 0.34
DNMT3B-202ENST00000328111 ATP10BO94823 1461 aa17.17■□□□□ 0.34
DNMT3B-202ENST00000328111 DNTTIP2Q5QJE6 756 aaKnown RBP17.17■□□□□ 0.34
DNMT3B-202ENST00000328111 CFAP43Q8NDM7 1665 aa17.17■□□□□ 0.34
DNMT3B-202ENST00000328111 SLFN5Q08AF3 891 aa17.17■□□□□ 0.34
DNMT3B-202ENST00000328111 PRKAR2BP31323 418 aa17.16■□□□□ 0.34
DNMT3B-202ENST00000328111 NOL8Q76FK4 1167 aaKnown RBP17.16■□□□□ 0.34
DNMT3B-202ENST00000328111 ADGRF5Q8IZF2 1346 aa17.16■□□□□ 0.34
DNMT3B-202ENST00000328111 GOLGA6L3A6NEY3 463 aa17.16■□□□□ 0.34
DNMT3B-202ENST00000328111 CTTNBP2Q8WZ74 1663 aa17.16■□□□□ 0.34
DNMT3B-202ENST00000328111 NAP1L2Q9ULW6 460 aaPredicted RBP17.16■□□□□ 0.34
DNMT3B-202ENST00000328111 NFKBIBQ15653 356 aa17.15■□□□□ 0.34
DNMT3B-202ENST00000328111 CABP1Q9NZU7 370 aa17.15■□□□□ 0.34
DNMT3B-202ENST00000328111 DISP3Q9P2K9 1392 aa17.15■□□□□ 0.34
DNMT3B-202ENST00000328111 GNAI1P63096 354 aa17.15■□□□□ 0.34
DNMT3B-202ENST00000328111 TCOF1Q13428 1488 aaKnown RBP17.14■□□□□ 0.34
DNMT3B-202ENST00000328111 CSB-PGBD3P0DP91 1061 aa17.14■□□□□ 0.33
DNMT3B-202ENST00000328111 WWC1Q8IX03 1113 aa17.14■□□□□ 0.33
DNMT3B-202ENST00000328111 NECTIN2Q92692 538 aa17.14■□□□□ 0.33
DNMT3B-202ENST00000328111 API5Q9BZZ5 524 aaKnown RBP17.14■□□□□ 0.33
DNMT3B-202ENST00000328111 PDZRN3Q9UPQ7 1066 aa17.14■□□□□ 0.33
DNMT3B-202ENST00000328111 SLC52A1Q9NWF4 448 aa17.13■□□□□ 0.33
DNMT3B-202ENST00000328111 RAPGEF6Q8TEU7 1601 aa17.13■□□□□ 0.33
DNMT3B-202ENST00000328111 AAMPQ13685 434 aa17.12■□□□□ 0.33
DNMT3B-202ENST00000328111 CDK19Q9BWU1 502 aa17.11■□□□□ 0.33
DNMT3B-202ENST00000328111 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.11■□□□□ 0.33
DNMT3B-202ENST00000328111 C22orf23Q9BZE7 217 aa17.11■□□□□ 0.33
DNMT3B-202ENST00000328111 NSD3Q9BZ95 1437 aa17.11■□□□□ 0.33
DNMT3B-202ENST00000328111 GOLGA6L4A6NEF3 574 aa17.11■□□□□ 0.33
DNMT3B-202ENST00000328111 TXNDC2Q86VQ3 553 aa17.11■□□□□ 0.33
DNMT3B-202ENST00000328111 ZRSR1Q15695 479 aaKnown RBP17.1■□□□□ 0.33
DNMT3B-202ENST00000328111 FOXD4L5Q5VV16 416 aaPredicted RBP17.1■□□□□ 0.33
DNMT3B-202ENST00000328111 FOXD4L4Q8WXT5 416 aaPredicted RBP17.1■□□□□ 0.33
DNMT3B-202ENST00000328111 RILPL2Q969X0 211 aa17.1■□□□□ 0.33
DNMT3B-202ENST00000328111 CHMP4AQ9BY43 222 aa17.1■□□□□ 0.33
DNMT3B-202ENST00000328111 WDR63Q8IWG1 891 aa17.1■□□□□ 0.33
DNMT3B-202ENST00000328111 ST18O60284 1047 aa17.09■□□□□ 0.33
DNMT3B-202ENST00000328111 ZNF330Q9Y3S2 320 aaPredicted RBP17.08■□□□□ 0.33
DNMT3B-202ENST00000328111 DUSP27Q5VZP5 1158 aa17.08■□□□□ 0.32
DNMT3B-202ENST00000328111 WDR62O43379 1518 aa17.08■□□□□ 0.32
DNMT3B-202ENST00000328111 NOB1Q9ULX3 412 aaKnown RBP17.08■□□□□ 0.32
DNMT3B-202ENST00000328111 EIF2S2P20042 333 aaKnown RBP17.07■□□□□ 0.32
DNMT3B-202ENST00000328111 RPGRIP1LQ68CZ1 1315 aa17.07■□□□□ 0.32
DNMT3B-202ENST00000328111 MSNP26038 577 aaKnown RBP17.07■□□□□ 0.32
DNMT3B-202ENST00000328111 NUTM2GQ5VZR2 741 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms