RNA–Protein interactions for RNA: ENST00000328089.10

SPSB1-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB1, Length 3,120 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB1-201ENST00000328089 RTL5Q5HYW3 569 aaPredicted RBP24.77■■□□□ 1.56
SPSB1-201ENST00000328089 KANK1Q14678 1352 aa24.77■■□□□ 1.56
SPSB1-201ENST00000328089 CDCA8Q53HL2 280 aa24.76■■□□□ 1.55
SPSB1-201ENST00000328089 TRPM1Q7Z4N2 1603 aa24.76■■□□□ 1.55
SPSB1-201ENST00000328089 CARD14Q9BXL6 1004 aa24.76■■□□□ 1.55
SPSB1-201ENST00000328089 UGGT1Q9NYU2 1555 aa24.75■■□□□ 1.55
SPSB1-201ENST00000328089 NPM1P06748 294 aaKnown RBP eCLIP24.75■■□□□ 1.55
SPSB1-201ENST00000328089 DUOX2Q9NRD8 1548 aa24.75■■□□□ 1.55
SPSB1-201ENST00000328089 DUSP27Q5VZP5 1158 aa24.75■■□□□ 1.55
SPSB1-201ENST00000328089 RAPGEF3O95398 923 aa24.72■■□□□ 1.55
SPSB1-201ENST00000328089 TCERG1O14776 1098 aaKnown RBP24.72■■□□□ 1.55
SPSB1-201ENST00000328089 MORC1Q86VD1 984 aa24.7■■□□□ 1.54
SPSB1-201ENST00000328089 WASHC2CQ9Y4E1 1318 aa24.69■■□□□ 1.54
SPSB1-201ENST00000328089 BACH2Q9BYV9 841 aa24.68■■□□□ 1.54
SPSB1-201ENST00000328089 FANCAO15360 1455 aa24.68■■□□□ 1.54
SPSB1-201ENST00000328089 CFAP65Q6ZU64 1925 aaKnown RBP24.68■■□□□ 1.54
SPSB1-201ENST00000328089 CLUAP1Q96AJ1 413 aa24.67■■□□□ 1.54
SPSB1-201ENST00000328089 WDR7Q9Y4E6 1490 aa24.67■■□□□ 1.54
SPSB1-201ENST00000328089 ATP10AO60312 1499 aa24.66■■□□□ 1.54
SPSB1-201ENST00000328089 MYO5CQ9NQX4 1742 aa24.66■■□□□ 1.54
SPSB1-201ENST00000328089 PANK1Q8TE04 598 aa24.65■■□□□ 1.54
SPSB1-201ENST00000328089 PRDM15P57071 1507 aaPredicted RBP24.65■■□□□ 1.54
SPSB1-201ENST00000328089 MAST1Q9Y2H9 1570 aa24.64■■□□□ 1.53
SPSB1-201ENST00000328089 COG6Q9Y2V7 657 aa24.64■■□□□ 1.53
SPSB1-201ENST00000328089 NEFMP07197 916 aa24.63■■□□□ 1.53
SPSB1-201ENST00000328089 ADGRL1O94910 1474 aa24.62■■□□□ 1.53
SPSB1-201ENST00000328089 CABP2Q9NPB3 220 aa24.62■■□□□ 1.53
SPSB1-201ENST00000328089 SCAF11Q99590 1463 aaKnown RBP24.62■■□□□ 1.53
SPSB1-201ENST00000328089 ZCCHC11Q5TAX3 1644 aaKnown RBP24.61■■□□□ 1.53
SPSB1-201ENST00000328089 SLFN5Q08AF3 891 aa24.61■■□□□ 1.53
SPSB1-201ENST00000328089 DAXXQ9UER7 740 aaPredicted RBP24.61■■□□□ 1.53
SPSB1-201ENST00000328089 UNC13BO14795 1591 aa24.6■■□□□ 1.53
SPSB1-201ENST00000328089 CENPJQ9HC77 1338 aaPredicted RBP24.6■■□□□ 1.53
SPSB1-201ENST00000328089 EIF3AQ14152 1382 aaKnown RBP24.59■■□□□ 1.53
SPSB1-201ENST00000328089 TNNQ9UQP3 1299 aa24.59■■□□□ 1.53
SPSB1-201ENST00000328089 IQGAP3Q86VI3 1631 aa24.58■■□□□ 1.53
SPSB1-201ENST00000328089 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.58■■□□□ 1.53
SPSB1-201ENST00000328089 BLMP54132 1417 aaPredicted RBP24.58■■□□□ 1.52
SPSB1-201ENST00000328089 ABCC1P33527 1531 aa24.57■■□□□ 1.52
SPSB1-201ENST00000328089 MTHFSP49914 203 aa24.57■■□□□ 1.52
SPSB1-201ENST00000328089 NOS1P29475 1434 aa24.57■■□□□ 1.52
SPSB1-201ENST00000328089 U2SURPO15042 1029 aaKnown RBP24.57■■□□□ 1.52
SPSB1-201ENST00000328089 PPM1GO15355 546 aaPredicted RBP24.57■■□□□ 1.52
SPSB1-201ENST00000328089 U2AF1L5P0DN76 240 aaPredicted RBP24.55■■□□□ 1.52
SPSB1-201ENST00000328089 U2AF1Q01081 240 aaKnown RBP eCLIP24.55■■□□□ 1.52
SPSB1-201ENST00000328089 E9PCH4 1651 aa24.54■■□□□ 1.52
SPSB1-201ENST00000328089 SRPK2P78362 688 aaKnown RBP24.54■■□□□ 1.52
SPSB1-201ENST00000328089 FBLN1P23142 703 aa24.52■■□□□ 1.52
SPSB1-201ENST00000328089 TCP11L2Q8N4U5 519 aa24.52■■□□□ 1.52
SPSB1-201ENST00000328089 ASXL2Q76L83 1435 aa24.52■■□□□ 1.52
SPSB1-201ENST00000328089 GGNBP2Q9H3C7 697 aa24.51■■□□□ 1.51
SPSB1-201ENST00000328089 IGHDP01880 384 aa24.51■■□□□ 1.51
SPSB1-201ENST00000328089 PLXNC1O60486 1568 aa24.51■■□□□ 1.51
SPSB1-201ENST00000328089 WWC1Q8IX03 1113 aa24.5■■□□□ 1.51
SPSB1-201ENST00000328089 RTN4Q9NQC3 1192 aaKnown RBP24.5■■□□□ 1.51
SPSB1-201ENST00000328089 CLTCL1P53675 1640 aa24.5■■□□□ 1.51
SPSB1-201ENST00000328089 NSD3Q9BZ95 1437 aa24.5■■□□□ 1.51
SPSB1-201ENST00000328089 MLECQ14165 292 aa24.5■■□□□ 1.51
SPSB1-201ENST00000328089 MINK1Q8N4C8 1332 aaPredicted RBP24.49■■□□□ 1.51
SPSB1-201ENST00000328089 ASXL1Q8IXJ9 1541 aa24.48■■□□□ 1.51
SPSB1-201ENST00000328089 ZFYVE16Q7Z3T8 1539 aa24.48■■□□□ 1.51
SPSB1-201ENST00000328089 EIF2AK4Q9P2K8 1649 aaKnown RBP24.47■■□□□ 1.51
SPSB1-201ENST00000328089 CENPQQ7L2Z9 268 aaPredicted RBP24.47■■□□□ 1.51
SPSB1-201ENST00000328089 E9PSI1 815 aa24.47■■□□□ 1.51
SPSB1-201ENST00000328089 ZNF521Q96K83 1311 aa24.47■■□□□ 1.51
SPSB1-201ENST00000328089 STAG3Q9UJ98 1225 aa24.46■■□□□ 1.51
SPSB1-201ENST00000328089 TSR2Q969E8 191 aaKnown RBP24.46■■□□□ 1.51
SPSB1-201ENST00000328089 ATP7AQ04656 1500 aa24.46■■□□□ 1.51
SPSB1-201ENST00000328089 ZMYM4Q5VZL5 1548 aa24.46■■□□□ 1.51
SPSB1-201ENST00000328089 MS4A1P11836 297 aa24.46■■□□□ 1.51
SPSB1-201ENST00000328089 SHROOM2Q13796 1616 aa24.44■■□□□ 1.5
SPSB1-201ENST00000328089 MADDQ8WXG6 1647 aa24.44■■□□□ 1.5
SPSB1-201ENST00000328089 PTPRTO14522 1441 aa24.43■■□□□ 1.5
SPSB1-201ENST00000328089 ERVK-7P63135 1459 aa24.42■■□□□ 1.5
SPSB1-201ENST00000328089 PLPPR3Q6T4P5 718 aa24.41■■□□□ 1.5
SPSB1-201ENST00000328089 OSCARQ8IYS5 282 aa24.41■■□□□ 1.5
SPSB1-201ENST00000328089 POGKQ9P215 609 aa24.41■■□□□ 1.5
SPSB1-201ENST00000328089 TRPM2O94759 1503 aa24.41■■□□□ 1.5
SPSB1-201ENST00000328089 KDM2BQ8NHM5 1336 aa24.41■■□□□ 1.5
SPSB1-201ENST00000328089 IDI1Q13907 227 aa24.41■■□□□ 1.5
SPSB1-201ENST00000328089 CYB5RLQ6IPT4 315 aa24.41■■□□□ 1.5
SPSB1-201ENST00000328089 RTEL1-TNFRSF6BF6WH68 1400 aa24.4■■□□□ 1.5
SPSB1-201ENST00000328089 FBXO31Q5XUX0 539 aaPredicted RBP24.4■■□□□ 1.5
SPSB1-201ENST00000328089 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.4■■□□□ 1.5
SPSB1-201ENST00000328089 RLBP1P12271 317 aa24.39■■□□□ 1.5
SPSB1-201ENST00000328089 FAM161AQ3B820 660 aa24.38■■□□□ 1.49
SPSB1-201ENST00000328089 C14orf93Q9H972 538 aaKnown RBP24.38■■□□□ 1.49
SPSB1-201ENST00000328089 CD109Q6YHK3 1445 aa24.37■■□□□ 1.49
SPSB1-201ENST00000328089 SPRYD3Q8NCJ5 442 aa24.37■■□□□ 1.49
SPSB1-201ENST00000328089 CFAP53Q96M91 514 aa24.37■■□□□ 1.49
SPSB1-201ENST00000328089 C8orf34Q49A92 452 aa24.37■■□□□ 1.49
SPSB1-201ENST00000328089 RUNDC1Q96C34 613 aa24.36■■□□□ 1.49
SPSB1-201ENST00000328089 CGNL1Q0VF96 1302 aa24.36■■□□□ 1.49
SPSB1-201ENST00000328089 SEC24BO95487 1268 aa24.35■■□□□ 1.49
SPSB1-201ENST00000328089 STAC3Q96MF2 364 aa24.35■■□□□ 1.49
SPSB1-201ENST00000328089 NKTRP30414 1462 aaKnown RBP24.33■■□□□ 1.49
SPSB1-201ENST00000328089 NPATQ14207 1427 aa24.33■■□□□ 1.49
SPSB1-201ENST00000328089 PRAM1Q96QH2 718 aa24.33■■□□□ 1.49
SPSB1-201ENST00000328089 PIK3C2GO75747 1445 aa24.33■■□□□ 1.48
SPSB1-201ENST00000328089 ARXQ96QS3 562 aa24.33■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms