RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 RPGRIP1LQ68CZ1 1315 aa26.72■■□□□ 1.87
EXOSC3-201ENST00000327304 CEP170BQ9Y4F5 1589 aaPredicted RBP26.71■■□□□ 1.87
EXOSC3-201ENST00000327304 MYOM2P54296 1465 aa26.71■■□□□ 1.87
EXOSC3-201ENST00000327304 PRAG1Q86YV5 1406 aa26.71■■□□□ 1.87
EXOSC3-201ENST00000327304 SETD1BQ9UPS6 1966 aaKnown RBP26.71■■□□□ 1.87
EXOSC3-201ENST00000327304 NUTM2DQ5VT03 806 aaPredicted RBP26.68■■□□□ 1.86
EXOSC3-201ENST00000327304 ZNF142P52746 1687 aaPredicted RBP26.68■■□□□ 1.86
EXOSC3-201ENST00000327304 ADGRF5Q8IZF2 1346 aa26.67■■□□□ 1.86
EXOSC3-201ENST00000327304 STAC3Q96MF2 364 aa26.67■■□□□ 1.86
EXOSC3-201ENST00000327304 RIMS2Q9UQ26 1411 aa26.66■■□□□ 1.86
EXOSC3-201ENST00000327304 NRXN1Q9ULB1 1477 aa26.65■■□□□ 1.86
EXOSC3-201ENST00000327304 ZFYVE9O95405 1425 aa26.65■■□□□ 1.86
EXOSC3-201ENST00000327304 TMEM2Q9UHN6 1383 aa26.64■■□□□ 1.85
EXOSC3-201ENST00000327304 TRPM1Q7Z4N2 1603 aa26.61■■□□□ 1.85
EXOSC3-201ENST00000327304 RALGAPBQ86X10 1494 aa26.61■■□□□ 1.85
EXOSC3-201ENST00000327304 VGFO15240 615 aaPredicted RBP26.6■■□□□ 1.85
EXOSC3-201ENST00000327304 THEMISQ8N1K5 641 aaPredicted RBP26.6■■□□□ 1.85
EXOSC3-201ENST00000327304 SLIT1O75093 1534 aa26.59■■□□□ 1.85
EXOSC3-201ENST00000327304 PIK3C2GO75747 1445 aa26.59■■□□□ 1.85
EXOSC3-201ENST00000327304 ARHGAP23Q9P227 1491 aa26.59■■□□□ 1.85
EXOSC3-201ENST00000327304 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.55■■□□□ 1.84
EXOSC3-201ENST00000327304 SENP3Q9H4L4 574 aaPredicted RBP26.55■■□□□ 1.84
EXOSC3-201ENST00000327304 NBPF1Q3BBV0 1214 aa26.54■■□□□ 1.84
EXOSC3-201ENST00000327304 LTKP29376 864 aa26.53■■□□□ 1.84
EXOSC3-201ENST00000327304 CFAP70Q5T0N1 1121 aa26.53■■□□□ 1.84
EXOSC3-201ENST00000327304 KIAA1210Q9ULL0 1709 aa26.53■■□□□ 1.84
EXOSC3-201ENST00000327304 ROCK2O75116 1388 aaKnown RBP26.52■■□□□ 1.84
EXOSC3-201ENST00000327304 HDGFP51858 240 aaKnown RBP26.52■■□□□ 1.84
EXOSC3-201ENST00000327304 TXNDC2Q86VQ3 553 aa26.51■■□□□ 1.83
EXOSC3-201ENST00000327304 C14orf93Q9H972 538 aaKnown RBP26.49■■□□□ 1.83
EXOSC3-201ENST00000327304 EID1Q9Y6B2 187 aa26.49■■□□□ 1.83
EXOSC3-201ENST00000327304 GPRASP1Q5JY77 1395 aa26.49■■□□□ 1.83
EXOSC3-201ENST00000327304 SCAF11Q99590 1463 aaKnown RBP26.48■■□□□ 1.83
EXOSC3-201ENST00000327304 NRXN3Q9Y4C0 1643 aa26.48■■□□□ 1.83
EXOSC3-201ENST00000327304 CARD11Q9BXL7 1154 aa26.47■■□□□ 1.83
EXOSC3-201ENST00000327304 LAMC1P11047 1609 aa26.46■■□□□ 1.83
EXOSC3-201ENST00000327304 PLEKHG1Q9ULL1 1385 aa26.46■■□□□ 1.83
EXOSC3-201ENST00000327304 SETBP1Q9Y6X0 1596 aa26.46■■□□□ 1.83
EXOSC3-201ENST00000327304 IQGAP1P46940 1657 aa26.46■■□□□ 1.83
EXOSC3-201ENST00000327304 LMTK3Q96Q04 1460 aa26.45■■□□□ 1.82
EXOSC3-201ENST00000327304 ALKQ9UM73 1620 aa26.45■■□□□ 1.82
EXOSC3-201ENST00000327304 ADGRB1O14514 1584 aa26.43■■□□□ 1.82
EXOSC3-201ENST00000327304 ASXL1Q8IXJ9 1541 aa26.42■■□□□ 1.82
EXOSC3-201ENST00000327304 ANKLE2Q86XL3 938 aa26.42■■□□□ 1.82
EXOSC3-201ENST00000327304 SETD1AO15047 1707 aaKnown RBP26.41■■□□□ 1.82
EXOSC3-201ENST00000327304 TMEM132EQ6IEE7 984 aa26.4■■□□□ 1.82
EXOSC3-201ENST00000327304 BCANQ96GW7 911 aa26.4■■□□□ 1.82
EXOSC3-201ENST00000327304 USP47Q96K76 1375 aa26.4■■□□□ 1.82
EXOSC3-201ENST00000327304 HSPA2P54652 639 aa26.39■■□□□ 1.82
EXOSC3-201ENST00000327304 ADAMTS13Q76LX8 1427 aa26.39■■□□□ 1.82
EXOSC3-201ENST00000327304 HSPA5P11021 654 aaKnown RBP26.39■■□□□ 1.81
EXOSC3-201ENST00000327304 EIF4G2P78344 907 aaKnown RBP eCLIP26.38■■□□□ 1.81
EXOSC3-201ENST00000327304 HIRIP3Q9BW71 556 aaPredicted RBP26.38■■□□□ 1.81
EXOSC3-201ENST00000327304 POLR1AO95602 1720 aaPredicted RBP26.38■■□□□ 1.81
EXOSC3-201ENST00000327304 NCKAP5LQ9HCH0 1330 aa26.35■■□□□ 1.81
EXOSC3-201ENST00000327304 MED14O60244 1454 aa26.35■■□□□ 1.81
EXOSC3-201ENST00000327304 SLC26A8Q96RN1 970 aa26.34■■□□□ 1.81
EXOSC3-201ENST00000327304 METP08581 1390 aa26.33■■□□□ 1.81
EXOSC3-201ENST00000327304 NPHP4O75161 1426 aaPredicted RBP26.31■■□□□ 1.8
EXOSC3-201ENST00000327304 DIP2AQ14689 1571 aa26.3■■□□□ 1.8
EXOSC3-201ENST00000327304 YTHDC2Q9H6S0 1430 aaKnown RBP26.3■■□□□ 1.8
EXOSC3-201ENST00000327304 TRAK1Q9UPV9 953 aa26.28■■□□□ 1.8
EXOSC3-201ENST00000327304 TBX22Q9Y458 520 aa26.28■■□□□ 1.8
EXOSC3-201ENST00000327304 ST20-MTHFSA0A0A6YYL1 179 aa26.28■■□□□ 1.8
EXOSC3-201ENST00000327304 STK26Q9P289 416 aa26.28■■□□□ 1.8
EXOSC3-201ENST00000327304 LRPPRCP42704 1394 aaKnown RBP26.26■■□□□ 1.79
EXOSC3-201ENST00000327304 EIF3AQ14152 1382 aaKnown RBP26.24■■□□□ 1.79
EXOSC3-201ENST00000327304 ARHGEF28Q8N1W1 1705 aaKnown RBP26.24■■□□□ 1.79
EXOSC3-201ENST00000327304 MIER1Q8N108 512 aa26.24■■□□□ 1.79
EXOSC3-201ENST00000327304 STRCQ7RTU9 1775 aa26.23■■□□□ 1.79
EXOSC3-201ENST00000327304 PTPRUQ92729 1446 aa26.22■■□□□ 1.79
EXOSC3-201ENST00000327304 ABCC11Q96J66 1382 aa26.2■■□□□ 1.79
EXOSC3-201ENST00000327304 KNDC1Q76NI1 1749 aa26.19■■□□□ 1.78
EXOSC3-201ENST00000327304 DLC1Q96QB1 1528 aa26.19■■□□□ 1.78
EXOSC3-201ENST00000327304 TESK2Q96S53 571 aa26.18■■□□□ 1.78
EXOSC3-201ENST00000327304 TECPR2O15040 1411 aa26.17■■□□□ 1.78
EXOSC3-201ENST00000327304 CENPJQ9HC77 1338 aaPredicted RBP26.17■■□□□ 1.78
EXOSC3-201ENST00000327304 PIK3R4Q99570 1358 aa26.17■■□□□ 1.78
EXOSC3-201ENST00000327304 CPS1P31327 1500 aa26.16■■□□□ 1.78
EXOSC3-201ENST00000327304 QRICH2Q9H0J4 1663 aa26.15■■□□□ 1.78
EXOSC3-201ENST00000327304 C11orf95C9JLR9 678 aaPredicted RBP26.15■■□□□ 1.78
EXOSC3-201ENST00000327304 XRN1Q8IZH2 1706 aaKnown RBP26.15■■□□□ 1.78
EXOSC3-201ENST00000327304 PRAM1Q96QH2 718 aa26.14■■□□□ 1.78
EXOSC3-201ENST00000327304 AMOTL2Q9Y2J4 779 aa26.14■■□□□ 1.78
EXOSC3-201ENST00000327304 CHD2O14647 1828 aaKnown RBP26.13■■□□□ 1.77
EXOSC3-201ENST00000327304 ROBO2Q9HCK4 1378 aa26.13■■□□□ 1.77
EXOSC3-201ENST00000327304 SAFB2Q14151 953 aaKnown RBP eCLIP26.12■■□□□ 1.77
EXOSC3-201ENST00000327304 PLEKHH1Q9ULM0 1364 aa26.12■■□□□ 1.77
EXOSC3-201ENST00000327304 DDX10Q13206 875 aaKnown RBP26.11■■□□□ 1.77
EXOSC3-201ENST00000327304 WAPLQ7Z5K2 1190 aa26.11■■□□□ 1.77
EXOSC3-201ENST00000327304 POGKQ9P215 609 aa26.11■■□□□ 1.77
EXOSC3-201ENST00000327304 FAM135BQ49AJ0 1406 aa26.1■■□□□ 1.77
EXOSC3-201ENST00000327304 DISP3Q9P2K9 1392 aa26.09■■□□□ 1.77
EXOSC3-201ENST00000327304 SBNO2Q9Y2G9 1366 aa26.09■■□□□ 1.77
EXOSC3-201ENST00000327304 WASHC2AQ641Q2 1341 aa26.09■■□□□ 1.77
EXOSC3-201ENST00000327304 KCNA6P17658 529 aa26.09■■□□□ 1.77
EXOSC3-201ENST00000327304 SIRT1Q96EB6 747 aa26.09■■□□□ 1.77
EXOSC3-201ENST00000327304 PTCH1Q13635 1447 aa26.09■■□□□ 1.77
EXOSC3-201ENST00000327304 KIF7Q2M1P5 1343 aa26.07■■□□□ 1.76
EXOSC3-201ENST00000327304 CCDC7Q96M83 1385 aa26.07■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms