RNA–Protein interactions for RNA: ENST00000323347.14

SMARCD2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2 BASIC

Gene SMARCD2, Length 1,935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-202ENST00000323347 RBM19Q9Y4C8 960 aaKnown RBP21.29■■□□□ 1
SMARCD2-202ENST00000323347 MLH3Q9UHC1 1453 aa21.29■■□□□ 1
SMARCD2-202ENST00000323347 CDCA8Q53HL2 280 aa21.27■■□□□ 1
SMARCD2-202ENST00000323347 NPM1P06748 294 aaKnown RBP eCLIP21.26■□□□□ 0.99
SMARCD2-202ENST00000323347 MAP3K4Q9Y6R4 1608 aa21.26■□□□□ 0.99
SMARCD2-202ENST00000323347 SYNMO15061 1565 aa21.26■□□□□ 0.99
SMARCD2-202ENST00000323347 POGZQ7Z3K3 1410 aa21.26■□□□□ 0.99
SMARCD2-202ENST00000323347 SLC24A1O60721 1099 aa21.25■□□□□ 0.99
SMARCD2-202ENST00000323347 NRXN1Q9ULB1 1477 aa21.25■□□□□ 0.99
SMARCD2-202ENST00000323347 PDE3BQ13370 1112 aa21.25■□□□□ 0.99
SMARCD2-202ENST00000323347 IFT172Q9UG01 1749 aa21.25■□□□□ 0.99
SMARCD2-202ENST00000323347 PPRC1Q5VV67 1664 aaKnown RBP21.25■□□□□ 0.99
SMARCD2-202ENST00000323347 CD109Q6YHK3 1445 aa21.24■□□□□ 0.99
SMARCD2-202ENST00000323347 EIF3AQ14152 1382 aaKnown RBP21.24■□□□□ 0.99
SMARCD2-202ENST00000323347 KDM4FA0A1W2PPD8 638 aa21.23■□□□□ 0.99
SMARCD2-202ENST00000323347 BLMP54132 1417 aaPredicted RBP21.23■□□□□ 0.99
SMARCD2-202ENST00000323347 KIF1BO60333 1816 aa21.23■□□□□ 0.99
SMARCD2-202ENST00000323347 NPC1L1Q9UHC9 1359 aa21.22■□□□□ 0.99
SMARCD2-202ENST00000323347 FRMPD1Q5SYB0 1578 aa21.21■□□□□ 0.99
SMARCD2-202ENST00000323347 FAM69CQ0P6D2 419 aa21.19■□□□□ 0.98
SMARCD2-202ENST00000323347 ABCA6Q8N139 1617 aa21.19■□□□□ 0.98
SMARCD2-202ENST00000323347 ADGRB3O60242 1522 aa21.19■□□□□ 0.98
SMARCD2-202ENST00000323347 MYT1LQ9UL68 1186 aa21.19■□□□□ 0.98
SMARCD2-202ENST00000323347 UGGT1Q9NYU2 1555 aa21.18■□□□□ 0.98
SMARCD2-202ENST00000323347 HECW2Q9P2P5 1572 aa21.18■□□□□ 0.98
SMARCD2-202ENST00000323347 NEO1Q92859 1461 aa21.18■□□□□ 0.98
SMARCD2-202ENST00000323347 CC2D1BQ5T0F9 858 aaKnown RBP21.18■□□□□ 0.98
SMARCD2-202ENST00000323347 AMER1Q5JTC6 1135 aaPredicted RBP21.17■□□□□ 0.98
SMARCD2-202ENST00000323347 MYOM1P52179 1685 aa21.17■□□□□ 0.98
SMARCD2-202ENST00000323347 MYO3AQ8NEV4 1616 aa21.16■□□□□ 0.98
SMARCD2-202ENST00000323347 SETBP1Q9Y6X0 1596 aa21.16■□□□□ 0.98
SMARCD2-202ENST00000323347 MROH2AA6NES4 1674 aa21.15■□□□□ 0.98
SMARCD2-202ENST00000323347 SBNO2Q9Y2G9 1366 aa21.15■□□□□ 0.98
SMARCD2-202ENST00000323347 B4GALNT3Q6L9W6 998 aa21.15■□□□□ 0.98
SMARCD2-202ENST00000323347 ASXL1Q8IXJ9 1541 aa21.15■□□□□ 0.98
SMARCD2-202ENST00000323347 KNSTRNQ9Y448 316 aa21.14■□□□□ 0.98
SMARCD2-202ENST00000323347 ADGRF5Q8IZF2 1346 aa21.14■□□□□ 0.97
SMARCD2-202ENST00000323347 KDM5AP29375 1690 aaKnown RBP21.13■□□□□ 0.97
SMARCD2-202ENST00000323347 NPATQ14207 1427 aa21.13■□□□□ 0.97
SMARCD2-202ENST00000323347 CFAP70Q5T0N1 1121 aa21.12■□□□□ 0.97
SMARCD2-202ENST00000323347 PIK3C2GO75747 1445 aa21.12■□□□□ 0.97
SMARCD2-202ENST00000323347 ERVK-7P63135 1459 aa21.11■□□□□ 0.97
SMARCD2-202ENST00000323347 FANCIQ9NVI1 1328 aa21.1■□□□□ 0.97
SMARCD2-202ENST00000323347 PPP2R1AP30153 589 aa21.1■□□□□ 0.97
SMARCD2-202ENST00000323347 ABCC3O15438 1527 aa21.1■□□□□ 0.97
SMARCD2-202ENST00000323347 RPGRIP1LQ68CZ1 1315 aa21.1■□□□□ 0.97
SMARCD2-202ENST00000323347 DIP2BQ9P265 1576 aa21.08■□□□□ 0.96
SMARCD2-202ENST00000323347 RRP1P56182 461 aaKnown RBP21.08■□□□□ 0.96
SMARCD2-202ENST00000323347 NOS1P29475 1434 aa21.07■□□□□ 0.96
SMARCD2-202ENST00000323347 PPLO60437 1756 aa21.07■□□□□ 0.96
SMARCD2-202ENST00000323347 RCAN3Q9UKA8 241 aa21.07■□□□□ 0.96
SMARCD2-202ENST00000323347 C14orf93Q9H972 538 aaKnown RBP21.05■□□□□ 0.96
SMARCD2-202ENST00000323347 ARHGAP31Q2M1Z3 1444 aa21.04■□□□□ 0.96
SMARCD2-202ENST00000323347 PIK3C2BO00750 1634 aa21.04■□□□□ 0.96
SMARCD2-202ENST00000323347 BCL11AQ9H165 835 aa21.04■□□□□ 0.96
SMARCD2-202ENST00000323347 ADGRB1O14514 1584 aa21.03■□□□□ 0.96
SMARCD2-202ENST00000323347 DIP2CQ9Y2E4 1556 aa21.03■□□□□ 0.96
SMARCD2-202ENST00000323347 CAMSAP1Q5T5Y3 1602 aa21.03■□□□□ 0.96
SMARCD2-202ENST00000323347 ANP32EQ9BTT0 268 aa21.03■□□□□ 0.96
SMARCD2-202ENST00000323347 SENP3-EIF4A1A0A087X0R7 540 aa21.02■□□□□ 0.96
SMARCD2-202ENST00000323347 ADAMTS8Q9UP79 889 aa21.02■□□□□ 0.96
SMARCD2-202ENST00000323347 CCDC136Q96JN2 1154 aa21.01■□□□□ 0.95
SMARCD2-202ENST00000323347 RICTORQ6R327 1708 aa21■□□□□ 0.95
SMARCD2-202ENST00000323347 GLI2P10070 1586 aa21■□□□□ 0.95
SMARCD2-202ENST00000323347 GGT6Q6P531 493 aa21■□□□□ 0.95
SMARCD2-202ENST00000323347 ZC3H13Q5T200 1668 aaKnown RBP20.99■□□□□ 0.95
SMARCD2-202ENST00000323347 CDCA7LQ96GN5 454 aa20.99■□□□□ 0.95
SMARCD2-202ENST00000323347 ZNF521Q96K83 1311 aa20.98■□□□□ 0.95
SMARCD2-202ENST00000323347 CENPJQ9HC77 1338 aaPredicted RBP20.98■□□□□ 0.95
SMARCD2-202ENST00000323347 SIGLEC1Q9BZZ2 1709 aa20.98■□□□□ 0.95
SMARCD2-202ENST00000323347 PUS7Q96PZ0 661 aaKnown RBP20.97■□□□□ 0.95
SMARCD2-202ENST00000323347 WDR43Q15061 677 aaKnown RBP eCLIP20.96■□□□□ 0.95
SMARCD2-202ENST00000323347 CARD14Q9BXL6 1004 aa20.96■□□□□ 0.95
SMARCD2-202ENST00000323347 TSPOAP1O95153 1857 aa20.95■□□□□ 0.94
SMARCD2-202ENST00000323347 RAPGEF3O95398 923 aa20.95■□□□□ 0.94
SMARCD2-202ENST00000323347 SALL2Q9Y467 1007 aaPredicted RBP20.95■□□□□ 0.94
SMARCD2-202ENST00000323347 ZFYVE9O95405 1425 aa20.95■□□□□ 0.94
SMARCD2-202ENST00000323347 NEXMIFQ5QGS0 1516 aa20.93■□□□□ 0.94
SMARCD2-202ENST00000323347 PLEKHH1Q9ULM0 1364 aa20.92■□□□□ 0.94
SMARCD2-202ENST00000323347 QRICH2Q9H0J4 1663 aa20.92■□□□□ 0.94
SMARCD2-202ENST00000323347 MSH5O43196 834 aa20.91■□□□□ 0.94
SMARCD2-202ENST00000323347 CHGAP10645 457 aaKnown RBP20.91■□□□□ 0.94
SMARCD2-202ENST00000323347 NGEFQ8N5V2 710 aa20.91■□□□□ 0.94
SMARCD2-202ENST00000323347 EXOC6Q8TAG9 804 aa20.91■□□□□ 0.94
SMARCD2-202ENST00000323347 USP32Q8NFA0 1604 aa20.9■□□□□ 0.94
SMARCD2-202ENST00000323347 VGFO15240 615 aaPredicted RBP20.9■□□□□ 0.94
SMARCD2-202ENST00000323347 POLR3AO14802 1390 aaPredicted RBP20.89■□□□□ 0.94
SMARCD2-202ENST00000323347 SLC52A1Q9NWF4 448 aa20.89■□□□□ 0.93
SMARCD2-202ENST00000323347 DUSP27Q5VZP5 1158 aa20.88■□□□□ 0.93
SMARCD2-202ENST00000323347 TRMT2AQ8IZ69 625 aaKnown RBP20.88■□□□□ 0.93
SMARCD2-202ENST00000323347 TRAK1Q9UPV9 953 aa20.87■□□□□ 0.93
SMARCD2-202ENST00000323347 CFAP65Q6ZU64 1925 aaKnown RBP20.87■□□□□ 0.93
SMARCD2-202ENST00000323347 YEATS2Q9ULM3 1422 aa20.87■□□□□ 0.93
SMARCD2-202ENST00000323347 GOLGA2Q08379 1002 aa20.86■□□□□ 0.93
SMARCD2-202ENST00000323347 ARHGEF28Q8N1W1 1705 aaKnown RBP20.84■□□□□ 0.93
SMARCD2-202ENST00000323347 SLFN5Q08AF3 891 aa20.84■□□□□ 0.93
SMARCD2-202ENST00000323347 NSD3Q9BZ95 1437 aa20.82■□□□□ 0.92
SMARCD2-202ENST00000323347 IDI1Q13907 227 aa20.82■□□□□ 0.92
SMARCD2-202ENST00000323347 TMEM132EQ6IEE7 984 aa20.82■□□□□ 0.92
SMARCD2-202ENST00000323347 REREQ9P2R6 1566 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms