RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 H0YHG0 523 aa20.51■□□□□ 0.87
SMCHD1-201ENST00000320876 RNF20Q5VTR2 975 aa20.5■□□□□ 0.87
SMCHD1-201ENST00000320876 MYO6Q9UM54 1294 aa20.5■□□□□ 0.87
SMCHD1-201ENST00000320876 SLC4A3P48751 1232 aa20.5■□□□□ 0.87
SMCHD1-201ENST00000320876 ERCC4Q92889 916 aaPredicted RBP20.5■□□□□ 0.87
SMCHD1-201ENST00000320876 AMOTL1Q8IY63 956 aa20.49■□□□□ 0.87
SMCHD1-201ENST00000320876 UACAQ9BZF9 1416 aa20.49■□□□□ 0.87
SMCHD1-201ENST00000320876 KAT6BQ8WYB5 2073 aa20.48■□□□□ 0.87
SMCHD1-201ENST00000320876 DDX19BQ9UMR2 479 aa20.48■□□□□ 0.87
SMCHD1-201ENST00000320876 PRDM2Q13029 1718 aa20.48■□□□□ 0.87
SMCHD1-201ENST00000320876 CPLX1O14810 134 aa20.47■□□□□ 0.87
SMCHD1-201ENST00000320876 CARMIL2Q6F5E8 1435 aa20.47■□□□□ 0.87
SMCHD1-201ENST00000320876 ANO2Q9NQ90 1003 aa20.47■□□□□ 0.87
SMCHD1-201ENST00000320876 ANO8Q9HCE9 1232 aaPredicted RBP20.46■□□□□ 0.87
SMCHD1-201ENST00000320876 NAP1L1P55209 391 aaKnown RBP20.46■□□□□ 0.87
SMCHD1-201ENST00000320876 CCDC173Q0VFZ6 552 aa20.45■□□□□ 0.87
SMCHD1-201ENST00000320876 CCP110O43303 1012 aa20.45■□□□□ 0.86
SMCHD1-201ENST00000320876 MRE11P49959 708 aa20.45■□□□□ 0.86
SMCHD1-201ENST00000320876 LETM1O95202 739 aaPredicted RBP20.44■□□□□ 0.86
SMCHD1-201ENST00000320876 SOGA1O94964 1423 aa20.44■□□□□ 0.86
SMCHD1-201ENST00000320876 CRBNQ96SW2 442 aa20.43■□□□□ 0.86
SMCHD1-201ENST00000320876 INTS3Q68E01 1043 aaKnown RBP20.43■□□□□ 0.86
SMCHD1-201ENST00000320876 CCDC73Q6ZRK6 1079 aa20.43■□□□□ 0.86
SMCHD1-201ENST00000320876 AMPHP49418 695 aa20.43■□□□□ 0.86
SMCHD1-201ENST00000320876 CAGE1Q8TC20 777 aa20.43■□□□□ 0.86
SMCHD1-201ENST00000320876 LEKR1Q6ZMV7 388 aa20.42■□□□□ 0.86
SMCHD1-201ENST00000320876 OLFM4Q6UX06 510 aa20.42■□□□□ 0.86
SMCHD1-201ENST00000320876 CT47A1Q5JQC4 288 aaPredicted RBP20.42■□□□□ 0.86
SMCHD1-201ENST00000320876 HMGN5P82970 282 aaKnown RBP20.41■□□□□ 0.86
SMCHD1-201ENST00000320876 NOL10Q9BSC4 688 aaKnown RBP20.41■□□□□ 0.86
SMCHD1-201ENST00000320876 SMC3Q9UQE7 1217 aa20.41■□□□□ 0.86
SMCHD1-201ENST00000320876 CCDC144AA2RUR9 1427 aa20.41■□□□□ 0.86
SMCHD1-201ENST00000320876 EPS15P42566 896 aa20.41■□□□□ 0.86
SMCHD1-201ENST00000320876 ODF2Q5BJF6 829 aa20.41■□□□□ 0.86
SMCHD1-201ENST00000320876 TRDNQ13061 729 aa20.4■□□□□ 0.86
SMCHD1-201ENST00000320876 AAMPQ13685 434 aa20.4■□□□□ 0.86
SMCHD1-201ENST00000320876 NEXNQ0ZGT2 675 aa20.4■□□□□ 0.86
SMCHD1-201ENST00000320876 PLIN1O60240 522 aa20.39■□□□□ 0.85
SMCHD1-201ENST00000320876 MLECQ14165 292 aa20.39■□□□□ 0.85
SMCHD1-201ENST00000320876 NGEFQ8N5V2 710 aa20.38■□□□□ 0.85
SMCHD1-201ENST00000320876 GGT6Q6P531 493 aa20.38■□□□□ 0.85
SMCHD1-201ENST00000320876 GTF2E1P29083 439 aaPredicted RBP20.38■□□□□ 0.85
SMCHD1-201ENST00000320876 C9orf78Q9NZ63 289 aaPredicted RBP20.38■□□□□ 0.85
SMCHD1-201ENST00000320876 VPS37CA5D8V6 355 aaPredicted RBP20.38■□□□□ 0.85
SMCHD1-201ENST00000320876 SAFBQ15424 915 aaKnown RBP eCLIP20.37■□□□□ 0.856e-7■□□□□ 8.9
SMCHD1-201ENST00000320876 EXOC6Q8TAG9 804 aa20.37■□□□□ 0.85
SMCHD1-201ENST00000320876 TRIM34Q9BYJ4 488 aa20.37■□□□□ 0.85
SMCHD1-201ENST00000320876 RRP7AQ9Y3A4 280 aaKnown RBP20.37■□□□□ 0.85
SMCHD1-201ENST00000320876 R3HCC1Q9Y3T6 440 aaKnown RBP20.37■□□□□ 0.85
SMCHD1-201ENST00000320876 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.37■□□□□ 0.852e-6■■■□□ 14.7
SMCHD1-201ENST00000320876 PKNOX2Q96KN3 472 aa20.37■□□□□ 0.85
SMCHD1-201ENST00000320876 KIF7Q2M1P5 1343 aa20.37■□□□□ 0.85
SMCHD1-201ENST00000320876 ERICH2A1L162 156 aa20.37■□□□□ 0.85
SMCHD1-201ENST00000320876 FBXO3Q9UK99 471 aa20.37■□□□□ 0.85
SMCHD1-201ENST00000320876 IFIT2P09913 472 aaKnown RBP20.36■□□□□ 0.85
SMCHD1-201ENST00000320876 NINLQ9Y2I6 1382 aa20.36■□□□□ 0.85
SMCHD1-201ENST00000320876 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.36■□□□□ 0.85
SMCHD1-201ENST00000320876 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.36■□□□□ 0.85
SMCHD1-201ENST00000320876 BCL2L13Q9BXK5 485 aa20.35■□□□□ 0.85
SMCHD1-201ENST00000320876 USP47Q96K76 1375 aa20.35■□□□□ 0.85
SMCHD1-201ENST00000320876 L3MBTL2Q969R5 705 aa20.35■□□□□ 0.85
SMCHD1-201ENST00000320876 C22orf23Q9BZE7 217 aa20.35■□□□□ 0.85
SMCHD1-201ENST00000320876 CCDC9Q9Y3X0 531 aaKnown RBP20.35■□□□□ 0.85
SMCHD1-201ENST00000320876 SMARCA2P51531 1590 aa20.34■□□□□ 0.85
SMCHD1-201ENST00000320876 DHX8Q14562 1220 aaKnown RBP20.34■□□□□ 0.85
SMCHD1-201ENST00000320876 NFKBIBQ15653 356 aa20.34■□□□□ 0.85
SMCHD1-201ENST00000320876 NFXL1Q6ZNB6 911 aa20.34■□□□□ 0.85
SMCHD1-201ENST00000320876 CCDC43Q96MW1 224 aaKnown RBP20.34■□□□□ 0.85
SMCHD1-201ENST00000320876 WWC1Q8IX03 1113 aa20.34■□□□□ 0.85
SMCHD1-201ENST00000320876 HSP90AB2PQ58FF8 381 aa20.34■□□□□ 0.85
SMCHD1-201ENST00000320876 C1orf141Q5JVX7 400 aa20.33■□□□□ 0.85
SMCHD1-201ENST00000320876 COG6Q9Y2V7 657 aa20.33■□□□□ 0.85
SMCHD1-201ENST00000320876 ZRSR2Q15696 482 aaKnown RBP20.33■□□□□ 0.85
SMCHD1-201ENST00000320876 FBXW7Q969H0 707 aa20.33■□□□□ 0.84
SMCHD1-201ENST00000320876 BRMS1Q9HCU9 246 aa20.33■□□□□ 0.84
SMCHD1-201ENST00000320876 NGDNQ8NEJ9 315 aaKnown RBP20.33■□□□□ 0.84
SMCHD1-201ENST00000320876 ERC2O15083 957 aa20.32■□□□□ 0.84
SMCHD1-201ENST00000320876 DZIP1LQ8IYY4 767 aaKnown RBP20.32■□□□□ 0.84
SMCHD1-201ENST00000320876 GOLGA6L10A6NI86 522 aa20.31■□□□□ 0.84
SMCHD1-201ENST00000320876 PDILTQ8N807 584 aa20.31■□□□□ 0.84
SMCHD1-201ENST00000320876 MBD3O95983 291 aa20.31■□□□□ 0.84
SMCHD1-201ENST00000320876 PANK3Q9H999 370 aa20.31■□□□□ 0.84
SMCHD1-201ENST00000320876 TAF3Q5VWG9 929 aa20.3■□□□□ 0.84
SMCHD1-201ENST00000320876 SMARCE1Q969G3 411 aa20.3■□□□□ 0.84
SMCHD1-201ENST00000320876 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.3■□□□□ 0.845e-7■■■■■ 71.3
SMCHD1-201ENST00000320876 KANK4Q5T7N3 995 aaPredicted RBP20.3■□□□□ 0.84
SMCHD1-201ENST00000320876 GOLGA6L7A0A1B0GV03 622 aa20.3■□□□□ 0.84
SMCHD1-201ENST00000320876 TRIM5Q9C035 493 aa20.29■□□□□ 0.84
SMCHD1-201ENST00000320876 CTDP1Q9Y5B0 961 aaPredicted RBP20.29■□□□□ 0.84
SMCHD1-201ENST00000320876 OFD1O75665 1012 aa20.28■□□□□ 0.84
SMCHD1-201ENST00000320876 KIAA0754O94854 1291 aa20.28■□□□□ 0.84
SMCHD1-201ENST00000320876 WIZO95785 1651 aa20.28■□□□□ 0.84
SMCHD1-201ENST00000320876 TSPY26PQ9H489 355 aa20.28■□□□□ 0.84
SMCHD1-201ENST00000320876 EVC2Q86UK5 1308 aa20.28■□□□□ 0.84
SMCHD1-201ENST00000320876 VPS37DQ86XT2 251 aa20.28■□□□□ 0.84
SMCHD1-201ENST00000320876 PRKRIP1Q9H875 184 aaPredicted RBP20.28■□□□□ 0.84
SMCHD1-201ENST00000320876 EID1Q9Y6B2 187 aa20.28■□□□□ 0.84
SMCHD1-201ENST00000320876 PSMA5P28066 241 aa20.27■□□□□ 0.84
SMCHD1-201ENST00000320876 TSPYL1Q9H0U9 437 aa20.27■□□□□ 0.84
SMCHD1-201ENST00000320876 AXDND1Q5T1B0 1012 aaPredicted RBP20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms