RNA–Protein interactions for RNA: ENST00000319792.7

NECTIN3-201, Transcript of nectin cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NECTIN3, Length 1,549 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-201ENST00000319792 TNRQ92752 1358 aa44.21■■■■■ 4.67
NECTIN3-201ENST00000319792 KDM5AP29375 1690 aaKnown RBP44.21■■■■■ 4.67
NECTIN3-201ENST00000319792 USP47Q96K76 1375 aa44.21■■■■■ 4.67
NECTIN3-201ENST00000319792 HIRIP3Q9BW71 556 aaPredicted RBP44.19■■■■■ 4.67
NECTIN3-201ENST00000319792 CARD11Q9BXL7 1154 aa44.19■■■■■ 4.67
NECTIN3-201ENST00000319792 DIEXFQ68CQ4 756 aaKnown RBP44.16■■■■■ 4.66
NECTIN3-201ENST00000319792 ADGRF5Q8IZF2 1346 aa44.16■■■■■ 4.66
NECTIN3-201ENST00000319792 ZFYVE9O95405 1425 aa44.15■■■■■ 4.66
NECTIN3-201ENST00000319792 RIMS1Q86UR5 1692 aaKnown RBP44.15■■■■■ 4.66
NECTIN3-201ENST00000319792 A2ML1A8K2U0 1454 aa44.14■■■■■ 4.66
NECTIN3-201ENST00000319792 NBPF1Q3BBV0 1214 aa44.14■■■■■ 4.66
NECTIN3-201ENST00000319792 PIK3C2GO75747 1445 aa44.13■■■■■ 4.65
NECTIN3-201ENST00000319792 POLR1AO95602 1720 aaPredicted RBP44.1■■■■■ 4.65
NECTIN3-201ENST00000319792 NLRP1Q9C000 1473 aa44.08■■■■■ 4.65
NECTIN3-201ENST00000319792 IQGAP1P46940 1657 aa44.08■■■■■ 4.65
NECTIN3-201ENST00000319792 UBR1Q8IWV7 1749 aa44.06■■■■■ 4.64
NECTIN3-201ENST00000319792 VGFO15240 615 aaPredicted RBP44.04■■■■■ 4.64
NECTIN3-201ENST00000319792 SETBP1Q9Y6X0 1596 aa44.03■■■■■ 4.64
NECTIN3-201ENST00000319792 CEBPAP49715 358 aaPredicted RBP44.03■■■■■ 4.64
NECTIN3-201ENST00000319792 STAG3Q9UJ98 1225 aa44.02■■■■■ 4.64
NECTIN3-201ENST00000319792 CFAP70Q5T0N1 1121 aa43.95■■■■■ 4.63
NECTIN3-201ENST00000319792 SCAF11Q99590 1463 aaKnown RBP43.94■■■■■ 4.62
NECTIN3-201ENST00000319792 MYO3AQ8NEV4 1616 aa43.94■■■■■ 4.62
NECTIN3-201ENST00000319792 C14orf93Q9H972 538 aaKnown RBP43.94■■■■■ 4.62
NECTIN3-201ENST00000319792 RIMS2Q9UQ26 1411 aa43.93■■■■■ 4.62
NECTIN3-201ENST00000319792 ADGRB1O14514 1584 aa43.91■■■■■ 4.62
NECTIN3-201ENST00000319792 WASHC2AQ641Q2 1341 aa43.89■■■■■ 4.62
NECTIN3-201ENST00000319792 ST20-MTHFSA0A0A6YYL1 179 aa43.88■■■■■ 4.61
NECTIN3-201ENST00000319792 CCDC7Q96M83 1385 aa43.86■■■■■ 4.61
NECTIN3-201ENST00000319792 NUTM2DQ5VT03 806 aaPredicted RBP43.86■■■■■ 4.61
NECTIN3-201ENST00000319792 C11orf95C9JLR9 678 aaPredicted RBP43.84■■■■■ 4.61
NECTIN3-201ENST00000319792 TMEM2Q9UHN6 1383 aa43.81■■■■■ 4.6
NECTIN3-201ENST00000319792 ABCF1Q8NE71 845 aaKnown RBP eCLIP43.8■■■■■ 4.6
NECTIN3-201ENST00000319792 EIF3AQ14152 1382 aaKnown RBP43.78■■■■■ 4.6
NECTIN3-201ENST00000319792 DDX10Q13206 875 aaKnown RBP43.78■■■■■ 4.6
NECTIN3-201ENST00000319792 KIF7Q2M1P5 1343 aa43.77■■■■■ 4.6
NECTIN3-201ENST00000319792 SETD1BQ9UPS6 1966 aaKnown RBP43.77■■■■■ 4.6
NECTIN3-201ENST00000319792 ZNF142P52746 1687 aaPredicted RBP43.77■■■■■ 4.6
NECTIN3-201ENST00000319792 ALKQ9UM73 1620 aa43.75■■■■■ 4.59
NECTIN3-201ENST00000319792 SLIT1O75093 1534 aa43.75■■■■■ 4.59
NECTIN3-201ENST00000319792 CEP170BQ9Y4F5 1589 aaPredicted RBP43.75■■■■■ 4.59
NECTIN3-201ENST00000319792 ASXL1Q8IXJ9 1541 aa43.74■■■■■ 4.59
NECTIN3-201ENST00000319792 PLPPR3Q6T4P5 718 aa43.74■■■■■ 4.59
NECTIN3-201ENST00000319792 SETD1AO15047 1707 aaKnown RBP43.74■■■■■ 4.59
NECTIN3-201ENST00000319792 ARHGAP23Q9P227 1491 aa43.73■■■■■ 4.59
NECTIN3-201ENST00000319792 NRXN3Q9Y4C0 1643 aa43.73■■■■■ 4.59
NECTIN3-201ENST00000319792 HDGFP51858 240 aaKnown RBP43.73■■■■■ 4.59
NECTIN3-201ENST00000319792 TESK2Q96S53 571 aa43.72■■■■■ 4.59
NECTIN3-201ENST00000319792 PTPRMP28827 1452 aa43.71■■■■■ 4.59
NECTIN3-201ENST00000319792 ARHGEF28Q8N1W1 1705 aaKnown RBP43.65■■■■■ 4.58
NECTIN3-201ENST00000319792 TMEM132EQ6IEE7 984 aa43.62■■■■■ 4.57
NECTIN3-201ENST00000319792 THEMISQ8N1K5 641 aaPredicted RBP43.6■■■■■ 4.57
NECTIN3-201ENST00000319792 SBNO2Q9Y2G9 1366 aa43.57■■■■■ 4.57
NECTIN3-201ENST00000319792 PLEKHG1Q9ULL1 1385 aa43.56■■■■■ 4.56
NECTIN3-201ENST00000319792 QRICH2Q9H0J4 1663 aa43.56■■■■■ 4.56
NECTIN3-201ENST00000319792 DISP3Q9P2K9 1392 aa43.55■■■■■ 4.56
NECTIN3-201ENST00000319792 TMF1P82094 1093 aa43.53■■■■■ 4.56
NECTIN3-201ENST00000319792 YTHDC2Q9H6S0 1430 aaKnown RBP43.53■■■■■ 4.56
NECTIN3-201ENST00000319792 MIER1Q8N108 512 aa43.52■■■■■ 4.56
NECTIN3-201ENST00000319792 SLC24A1O60721 1099 aa43.51■■■■■ 4.56
NECTIN3-201ENST00000319792 LTKP29376 864 aa43.51■■■■■ 4.56
NECTIN3-201ENST00000319792 TRAK1Q9UPV9 953 aa43.51■■■■■ 4.56
NECTIN3-201ENST00000319792 CENPJQ9HC77 1338 aaPredicted RBP43.49■■■■■ 4.55
NECTIN3-201ENST00000319792 EID1Q9Y6B2 187 aa43.49■■■■■ 4.55
NECTIN3-201ENST00000319792 TXNDC2Q86VQ3 553 aa43.48■■■■■ 4.55
NECTIN3-201ENST00000319792 ADAMTS13Q76LX8 1427 aa43.47■■■■■ 4.55
NECTIN3-201ENST00000319792 DLC1Q96QB1 1528 aa43.46■■■■■ 4.55
NECTIN3-201ENST00000319792 SENP3Q9H4L4 574 aaPredicted RBP43.45■■■■■ 4.55
NECTIN3-201ENST00000319792 MED14O60244 1454 aa43.44■■■■■ 4.54
NECTIN3-201ENST00000319792 KNDC1Q76NI1 1749 aa43.43■■■■■ 4.54
NECTIN3-201ENST00000319792 LRPPRCP42704 1394 aaKnown RBP43.43■■■■■ 4.54
NECTIN3-201ENST00000319792 DIP2AQ14689 1571 aa43.4■■■■■ 4.54
NECTIN3-201ENST00000319792 POLR3GLQ9BT43 218 aa43.39■■■■■ 4.54
NECTIN3-201ENST00000319792 CDCA8Q53HL2 280 aa43.38■■■■■ 4.54
NECTIN3-201ENST00000319792 METP08581 1390 aa43.38■■■■■ 4.53
NECTIN3-201ENST00000319792 ABCC11Q96J66 1382 aa43.36■■■■■ 4.53
NECTIN3-201ENST00000319792 STK26Q9P289 416 aa43.33■■■■■ 4.53
NECTIN3-201ENST00000319792 TECPR2O15040 1411 aa43.33■■■■■ 4.53
NECTIN3-201ENST00000319792 MYOM1P52179 1685 aa43.3■■■■■ 4.52
NECTIN3-201ENST00000319792 BCANQ96GW7 911 aa43.3■■■■■ 4.52
NECTIN3-201ENST00000319792 CPS1P31327 1500 aa43.3■■■■■ 4.52
NECTIN3-201ENST00000319792 KDM4FA0A1W2PPD8 638 aa43.25■■■■■ 4.51
NECTIN3-201ENST00000319792 ANP32CO43423 234 aa43.25■■■■■ 4.51
NECTIN3-201ENST00000319792 TBX22Q9Y458 520 aa43.24■■■■■ 4.51
NECTIN3-201ENST00000319792 TULP4Q9NRJ4 1543 aa43.24■■■■■ 4.51
NECTIN3-201ENST00000319792 ANKLE2Q86XL3 938 aa43.23■■■■■ 4.51
NECTIN3-201ENST00000319792 SIRT1Q96EB6 747 aa43.22■■■■■ 4.51
NECTIN3-201ENST00000319792 PRAM1Q96QH2 718 aa43.22■■■■■ 4.51
NECTIN3-201ENST00000319792 FAM135BQ49AJ0 1406 aa43.22■■■■■ 4.51
NECTIN3-201ENST00000319792 PUS7Q96PZ0 661 aaKnown RBP43.17■■■■■ 4.5
NECTIN3-201ENST00000319792 POGKQ9P215 609 aa43.17■■■■■ 4.5
NECTIN3-201ENST00000319792 SLC26A8Q96RN1 970 aa43.16■■■■■ 4.5
NECTIN3-201ENST00000319792 EVC2Q86UK5 1308 aa43.15■■■■■ 4.5
NECTIN3-201ENST00000319792 PTPRUQ92729 1446 aa43.13■■■■■ 4.5
NECTIN3-201ENST00000319792 XRN1Q8IZH2 1706 aaKnown RBP43.12■■■■■ 4.49
NECTIN3-201ENST00000319792 PIK3R4Q99570 1358 aa43.12■■■■■ 4.49
NECTIN3-201ENST00000319792 PLEKHH1Q9ULM0 1364 aa43.1■■■■■ 4.49
NECTIN3-201ENST00000319792 SAFB2Q14151 953 aaKnown RBP eCLIP43.09■■■■■ 4.49
NECTIN3-201ENST00000319792 NPHP4O75161 1426 aaPredicted RBP43.06■■■■■ 4.48
NECTIN3-201ENST00000319792 PTCH1Q13635 1447 aa43.05■■■■■ 4.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms