RNA–Protein interactions for RNA: ENST00000318988.10

CTDNEP1-201, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,549 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-201ENST00000318988 IFT172Q9UG01 1749 aa38.99■■■■□ 3.83
CTDNEP1-201ENST00000318988 NEXMIFQ5QGS0 1516 aa38.99■■■■□ 3.83
CTDNEP1-201ENST00000318988 PPLO60437 1756 aa38.98■■■■□ 3.83
CTDNEP1-201ENST00000318988 UBR1Q8IWV7 1749 aa38.98■■■■□ 3.83
CTDNEP1-201ENST00000318988 SETD1BQ9UPS6 1966 aaKnown RBP38.98■■■■□ 3.83
CTDNEP1-201ENST00000318988 THEMISQ8N1K5 641 aaPredicted RBP38.98■■■■□ 3.83
CTDNEP1-201ENST00000318988 NUTM2DQ5VT03 806 aaPredicted RBP38.97■■■■□ 3.83
CTDNEP1-201ENST00000318988 ABCF1Q8NE71 845 aaKnown RBP eCLIP38.97■■■■□ 3.83
CTDNEP1-201ENST00000318988 ADGRF5Q8IZF2 1346 aa38.96■■■■□ 3.83
CTDNEP1-201ENST00000318988 RIMS2Q9UQ26 1411 aa38.96■■■■□ 3.83
CTDNEP1-201ENST00000318988 CEP170BQ9Y4F5 1589 aaPredicted RBP38.95■■■■□ 3.83
CTDNEP1-201ENST00000318988 ZFYVE9O95405 1425 aa38.92■■■■□ 3.82
CTDNEP1-201ENST00000318988 TMEM2Q9UHN6 1383 aa38.92■■■■□ 3.82
CTDNEP1-201ENST00000318988 RALGAPBQ86X10 1494 aa38.9■■■■□ 3.82
CTDNEP1-201ENST00000318988 NRXN1Q9ULB1 1477 aa38.89■■■■□ 3.82
CTDNEP1-201ENST00000318988 ROCK2O75116 1388 aaKnown RBP38.87■■■■□ 3.81
CTDNEP1-201ENST00000318988 EID1Q9Y6B2 187 aa38.87■■■■□ 3.81
CTDNEP1-201ENST00000318988 ZNF142P52746 1687 aaPredicted RBP38.85■■■■□ 3.81
CTDNEP1-201ENST00000318988 PIK3C2GO75747 1445 aa38.83■■■■□ 3.81
CTDNEP1-201ENST00000318988 TRPM1Q7Z4N2 1603 aa38.83■■■■□ 3.81
CTDNEP1-201ENST00000318988 CARD11Q9BXL7 1154 aa38.82■■■■□ 3.8
CTDNEP1-201ENST00000318988 SLIT1O75093 1534 aa38.8■■■■□ 3.8
CTDNEP1-201ENST00000318988 TXNDC2Q86VQ3 553 aa38.8■■■■□ 3.8
CTDNEP1-201ENST00000318988 CFAP70Q5T0N1 1121 aa38.79■■■■□ 3.8
CTDNEP1-201ENST00000318988 NBPF1Q3BBV0 1214 aa38.78■■■■□ 3.8
CTDNEP1-201ENST00000318988 ARHGAP23Q9P227 1491 aa38.77■■■■□ 3.8
CTDNEP1-201ENST00000318988 C14orf93Q9H972 538 aaKnown RBP38.76■■■■□ 3.8
CTDNEP1-201ENST00000318988 BCANQ96GW7 911 aa38.75■■■■□ 3.79
CTDNEP1-201ENST00000318988 KIAA1210Q9ULL0 1709 aa38.75■■■■□ 3.79
CTDNEP1-201ENST00000318988 EIF4G2P78344 907 aaKnown RBP eCLIP38.74■■■■□ 3.79
CTDNEP1-201ENST00000318988 SENP3Q9H4L4 574 aaPredicted RBP38.74■■■■□ 3.79
CTDNEP1-201ENST00000318988 GPRASP1Q5JY77 1395 aa38.72■■■■□ 3.79
CTDNEP1-201ENST00000318988 LTKP29376 864 aa38.72■■■■□ 3.79
CTDNEP1-201ENST00000318988 ANKLE2Q86XL3 938 aa38.7■■■■□ 3.79
CTDNEP1-201ENST00000318988 SCAF11Q99590 1463 aaKnown RBP38.68■■■■□ 3.78
CTDNEP1-201ENST00000318988 LAMC1P11047 1609 aa38.68■■■■□ 3.78
CTDNEP1-201ENST00000318988 PLEKHG1Q9ULL1 1385 aa38.67■■■■□ 3.78
CTDNEP1-201ENST00000318988 USP47Q96K76 1375 aa38.65■■■■□ 3.78
CTDNEP1-201ENST00000318988 ZNF316A6NFI3 1004 aaPredicted RBP38.63■■■■□ 3.78
CTDNEP1-201ENST00000318988 HSPA5P11021 654 aaKnown RBP38.63■■■■□ 3.78
CTDNEP1-201ENST00000318988 SETBP1Q9Y6X0 1596 aa38.62■■■■□ 3.77
CTDNEP1-201ENST00000318988 ALKQ9UM73 1620 aa38.61■■■■□ 3.77
CTDNEP1-201ENST00000318988 TMEM132EQ6IEE7 984 aa38.58■■■■□ 3.77
CTDNEP1-201ENST00000318988 HIRIP3Q9BW71 556 aaPredicted RBP38.57■■■■□ 3.76
CTDNEP1-201ENST00000318988 ADGRB1O14514 1584 aa38.53■■■■□ 3.76
CTDNEP1-201ENST00000318988 EIF3AQ14152 1382 aaKnown RBP38.52■■■■□ 3.76
CTDNEP1-201ENST00000318988 IQGAP1P46940 1657 aa38.52■■■■□ 3.76
CTDNEP1-201ENST00000318988 NRXN3Q9Y4C0 1643 aa38.52■■■■□ 3.76
CTDNEP1-201ENST00000318988 LMTK3Q96Q04 1460 aa38.5■■■■□ 3.75
CTDNEP1-201ENST00000318988 ADAMTS13Q76LX8 1427 aa38.49■■■■□ 3.75
CTDNEP1-201ENST00000318988 SLC26A8Q96RN1 970 aa38.48■■■■□ 3.75
CTDNEP1-201ENST00000318988 ST20-MTHFSA0A0A6YYL1 179 aa38.48■■■■□ 3.75
CTDNEP1-201ENST00000318988 HSPA2P54652 639 aa38.48■■■■□ 3.75
CTDNEP1-201ENST00000318988 TRAK1Q9UPV9 953 aa38.47■■■■□ 3.75
CTDNEP1-201ENST00000318988 TBX22Q9Y458 520 aa38.47■■■■□ 3.75
CTDNEP1-201ENST00000318988 NCKAP5LQ9HCH0 1330 aa38.46■■■■□ 3.75
CTDNEP1-201ENST00000318988 STK26Q9P289 416 aa38.46■■■■□ 3.75
CTDNEP1-201ENST00000318988 ASXL1Q8IXJ9 1541 aa38.44■■■■□ 3.74
CTDNEP1-201ENST00000318988 NPHP4O75161 1426 aaPredicted RBP38.44■■■■□ 3.74
CTDNEP1-201ENST00000318988 YTHDC2Q9H6S0 1430 aaKnown RBP38.44■■■■□ 3.74
CTDNEP1-201ENST00000318988 DIP2AQ14689 1571 aa38.43■■■■□ 3.74
CTDNEP1-201ENST00000318988 METP08581 1390 aa38.42■■■■□ 3.74
CTDNEP1-201ENST00000318988 POLR1AO95602 1720 aaPredicted RBP38.42■■■■□ 3.74
CTDNEP1-201ENST00000318988 SETD1AO15047 1707 aaKnown RBP38.41■■■■□ 3.74
CTDNEP1-201ENST00000318988 MED14O60244 1454 aa38.41■■■■□ 3.74
CTDNEP1-201ENST00000318988 LRPPRCP42704 1394 aaKnown RBP38.39■■■■□ 3.74
CTDNEP1-201ENST00000318988 CENPJQ9HC77 1338 aaPredicted RBP38.34■■■■□ 3.73
CTDNEP1-201ENST00000318988 ABCC11Q96J66 1382 aa38.33■■■■□ 3.73
CTDNEP1-201ENST00000318988 SLC24A1O60721 1099 aa38.31■■■■□ 3.72
CTDNEP1-201ENST00000318988 POGKQ9P215 609 aa38.3■■■■□ 3.72
CTDNEP1-201ENST00000318988 PIK3R4Q99570 1358 aa38.3■■■■□ 3.72
CTDNEP1-201ENST00000318988 TESK2Q96S53 571 aa38.27■■■■□ 3.72
CTDNEP1-201ENST00000318988 PRAM1Q96QH2 718 aa38.26■■■■□ 3.72
CTDNEP1-201ENST00000318988 DLC1Q96QB1 1528 aa38.26■■■■□ 3.71
CTDNEP1-201ENST00000318988 TMF1P82094 1093 aa38.25■■■■□ 3.71
CTDNEP1-201ENST00000318988 AMOTL2Q9Y2J4 779 aa38.25■■■■□ 3.71
CTDNEP1-201ENST00000318988 ARHGEF28Q8N1W1 1705 aaKnown RBP38.25■■■■□ 3.71
CTDNEP1-201ENST00000318988 TECPR2O15040 1411 aa38.23■■■■□ 3.71
CTDNEP1-201ENST00000318988 SIRT1Q96EB6 747 aa38.22■■■■□ 3.71
CTDNEP1-201ENST00000318988 PTPRUQ92729 1446 aa38.21■■■■□ 3.71
CTDNEP1-201ENST00000318988 SAFB2Q14151 953 aaKnown RBP eCLIP38.21■■■■□ 3.71
CTDNEP1-201ENST00000318988 KNDC1Q76NI1 1749 aa38.2■■■■□ 3.71
CTDNEP1-201ENST00000318988 SBNO2Q9Y2G9 1366 aa38.19■■■■□ 3.7
CTDNEP1-201ENST00000318988 FAM135BQ49AJ0 1406 aa38.18■■■■□ 3.7
CTDNEP1-201ENST00000318988 C11orf95C9JLR9 678 aaPredicted RBP38.17■■■■□ 3.7
CTDNEP1-201ENST00000318988 POLR3GLQ9BT43 218 aa38.17■■■■□ 3.7
CTDNEP1-201ENST00000318988 WASHC2AQ641Q2 1341 aa38.17■■■■□ 3.7
CTDNEP1-201ENST00000318988 CPS1P31327 1500 aa38.17■■■■□ 3.7
CTDNEP1-201ENST00000318988 QRICH2Q9H0J4 1663 aa38.16■■■■□ 3.7
CTDNEP1-201ENST00000318988 CCDC7Q96M83 1385 aa38.16■■■■□ 3.7
CTDNEP1-201ENST00000318988 CDCA8Q53HL2 280 aa38.16■■■■□ 3.7
CTDNEP1-201ENST00000318988 WAPLQ7Z5K2 1190 aa38.16■■■■□ 3.7
CTDNEP1-201ENST00000318988 KIF7Q2M1P5 1343 aa38.15■■■■□ 3.7
CTDNEP1-201ENST00000318988 AEBP2Q6ZN18 517 aaPredicted RBP38.15■■■■□ 3.7
CTDNEP1-201ENST00000318988 STRCQ7RTU9 1775 aa38.13■■■■□ 3.69
CTDNEP1-201ENST00000318988 ROBO2Q9HCK4 1378 aa38.13■■■■□ 3.69
CTDNEP1-201ENST00000318988 DISP3Q9P2K9 1392 aa38.11■■■■□ 3.69
CTDNEP1-201ENST00000318988 KCNA6P17658 529 aa38.11■■■■□ 3.69
CTDNEP1-201ENST00000318988 DMRT2Q9Y5R5 561 aa38.11■■■■□ 3.69
CTDNEP1-201ENST00000318988 PTCH1Q13635 1447 aa38.11■■■■□ 3.69
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms