RNA–Protein interactions for RNA: ENST00000318974.13

PTPN6-201, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTPN6, Length 2,245 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-201ENST00000318974 DDX10Q13206 875 aaKnown RBP17.66■□□□□ 0.42
PTPN6-201ENST00000318974 NBPF1Q3BBV0 1214 aa17.66■□□□□ 0.42
PTPN6-201ENST00000318974 IFT172Q9UG01 1749 aa17.65■□□□□ 0.42
PTPN6-201ENST00000318974 ADGRF5Q8IZF2 1346 aa17.65■□□□□ 0.42
PTPN6-201ENST00000318974 NRXN1Q9ULB1 1477 aa17.63■□□□□ 0.41
PTPN6-201ENST00000318974 TMEM131LA2VDJ0 1609 aa17.62■□□□□ 0.41
PTPN6-201ENST00000318974 STAG3Q9UJ98 1225 aa17.62■□□□□ 0.41
PTPN6-201ENST00000318974 LAMC1P11047 1609 aa17.62■□□□□ 0.41
PTPN6-201ENST00000318974 TNRQ92752 1358 aa17.62■□□□□ 0.41
PTPN6-201ENST00000318974 VGFO15240 615 aaPredicted RBP17.61■□□□□ 0.41
PTPN6-201ENST00000318974 NEXMIFQ5QGS0 1516 aa17.61■□□□□ 0.41
PTPN6-201ENST00000318974 PPLO60437 1756 aa17.6■□□□□ 0.41
PTPN6-201ENST00000318974 FER1L4A9Z1Z3 1794 aa17.59■□□□□ 0.41
PTPN6-201ENST00000318974 CFAP70Q5T0N1 1121 aa17.59■□□□□ 0.41
PTPN6-201ENST00000318974 KIAA1210Q9ULL0 1709 aa17.58■□□□□ 0.41
PTPN6-201ENST00000318974 CEBPAP49715 358 aaPredicted RBP17.58■□□□□ 0.4
PTPN6-201ENST00000318974 PIK3C2GO75747 1445 aa17.58■□□□□ 0.4
PTPN6-201ENST00000318974 ZFYVE9O95405 1425 aa17.58■□□□□ 0.4
PTPN6-201ENST00000318974 ST20-MTHFSA0A0A6YYL1 179 aa17.57■□□□□ 0.4
PTPN6-201ENST00000318974 WASHC2AQ641Q2 1341 aa17.57■□□□□ 0.4
PTPN6-201ENST00000318974 A2ML1A8K2U0 1454 aa17.57■□□□□ 0.4
PTPN6-201ENST00000318974 C11orf95C9JLR9 678 aaPredicted RBP17.56■□□□□ 0.4
PTPN6-201ENST00000318974 NUTM2DQ5VT03 806 aaPredicted RBP17.56■□□□□ 0.4
PTPN6-201ENST00000318974 CCDC7Q96M83 1385 aa17.55■□□□□ 0.4
PTPN6-201ENST00000318974 C3P01024 1663 aa17.55■□□□□ 0.4
PTPN6-201ENST00000318974 CCER2I3L3R5 266 aa17.55■□□□□ 0.4
PTPN6-201ENST00000318974 C14orf93Q9H972 538 aaKnown RBP17.55■□□□□ 0.4
PTPN6-201ENST00000318974 ANP32CO43423 234 aa17.53■□□□□ 0.4
PTPN6-201ENST00000318974 SCAF11Q99590 1463 aaKnown RBP17.53■□□□□ 0.4
PTPN6-201ENST00000318974 MYO5BQ9ULV0 1848 aa17.53■□□□□ 0.4
PTPN6-201ENST00000318974 NLRP1Q9C000 1473 aa17.53■□□□□ 0.4
PTPN6-201ENST00000318974 KIF7Q2M1P5 1343 aa17.52■□□□□ 0.4
PTPN6-201ENST00000318974 PLPPR3Q6T4P5 718 aa17.52■□□□□ 0.39
PTPN6-201ENST00000318974 RIMS2Q9UQ26 1411 aa17.51■□□□□ 0.39
PTPN6-201ENST00000318974 SETBP1Q9Y6X0 1596 aa17.51■□□□□ 0.39
PTPN6-201ENST00000318974 IQGAP1P46940 1657 aa17.5■□□□□ 0.39
PTPN6-201ENST00000318974 ADAMTSL3P82987 1691 aa17.5■□□□□ 0.39
PTPN6-201ENST00000318974 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.49■□□□□ 0.39
PTPN6-201ENST00000318974 EIF3AQ14152 1382 aaKnown RBP17.49■□□□□ 0.39
PTPN6-201ENST00000318974 KDM5AP29375 1690 aaKnown RBP17.49■□□□□ 0.39
PTPN6-201ENST00000318974 RIMS1Q86UR5 1692 aaKnown RBP17.49■□□□□ 0.39
PTPN6-201ENST00000318974 HDGFP51858 240 aaKnown RBP17.48■□□□□ 0.39
PTPN6-201ENST00000318974 TESK2Q96S53 571 aa17.47■□□□□ 0.39
PTPN6-201ENST00000318974 POLR1AO95602 1720 aaPredicted RBP17.47■□□□□ 0.39
PTPN6-201ENST00000318974 ADGRB1O14514 1584 aa17.47■□□□□ 0.39
PTPN6-201ENST00000318974 UBR1Q8IWV7 1749 aa17.46■□□□□ 0.39
PTPN6-201ENST00000318974 TMEM2Q9UHN6 1383 aa17.46■□□□□ 0.38
PTPN6-201ENST00000318974 TMEM132EQ6IEE7 984 aa17.45■□□□□ 0.38
PTPN6-201ENST00000318974 POLR3GLQ9BT43 218 aa17.45■□□□□ 0.38
PTPN6-201ENST00000318974 TMF1P82094 1093 aa17.44■□□□□ 0.38
PTPN6-201ENST00000318974 SENP3Q9H4L4 574 aaPredicted RBP17.42■□□□□ 0.38
PTPN6-201ENST00000318974 TRAK1Q9UPV9 953 aa17.42■□□□□ 0.38
PTPN6-201ENST00000318974 MYO3AQ8NEV4 1616 aa17.41■□□□□ 0.38
PTPN6-201ENST00000318974 ALKQ9UM73 1620 aa17.41■□□□□ 0.38
PTPN6-201ENST00000318974 SLC24A1O60721 1099 aa17.41■□□□□ 0.38
PTPN6-201ENST00000318974 THEMISQ8N1K5 641 aaPredicted RBP17.4■□□□□ 0.38
PTPN6-201ENST00000318974 DISP3Q9P2K9 1392 aa17.4■□□□□ 0.38
PTPN6-201ENST00000318974 ASXL1Q8IXJ9 1541 aa17.39■□□□□ 0.37
PTPN6-201ENST00000318974 CENPJQ9HC77 1338 aaPredicted RBP17.39■□□□□ 0.37
PTPN6-201ENST00000318974 EID1Q9Y6B2 187 aa17.38■□□□□ 0.37
PTPN6-201ENST00000318974 SLIT1O75093 1534 aa17.38■□□□□ 0.37
PTPN6-201ENST00000318974 ARHGAP23Q9P227 1491 aa17.38■□□□□ 0.37
PTPN6-201ENST00000318974 SBNO2Q9Y2G9 1366 aa17.37■□□□□ 0.37
PTPN6-201ENST00000318974 CDCA8Q53HL2 280 aa17.37■□□□□ 0.37
PTPN6-201ENST00000318974 TXNDC2Q86VQ3 553 aa17.37■□□□□ 0.37
PTPN6-201ENST00000318974 CEP170BQ9Y4F5 1589 aaPredicted RBP17.36■□□□□ 0.37
PTPN6-201ENST00000318974 PTPRMP28827 1452 aa17.36■□□□□ 0.37
PTPN6-201ENST00000318974 YTHDC2Q9H6S0 1430 aaKnown RBP17.36■□□□□ 0.37
PTPN6-201ENST00000318974 LTKP29376 864 aa17.36■□□□□ 0.37
PTPN6-201ENST00000318974 BCANQ96GW7 911 aa17.35■□□□□ 0.37
PTPN6-201ENST00000318974 STK26Q9P289 416 aa17.35■□□□□ 0.37
PTPN6-201ENST00000318974 SUPT16HQ9Y5B9 1047 aaKnown RBP17.35■□□□□ 0.37
PTPN6-201ENST00000318974 PLEKHG1Q9ULL1 1385 aa17.35■□□□□ 0.37
PTPN6-201ENST00000318974 NRXN3Q9Y4C0 1643 aa17.34■□□□□ 0.37
PTPN6-201ENST00000318974 LRPPRCP42704 1394 aaKnown RBP17.32■□□□□ 0.36
PTPN6-201ENST00000318974 SETD1AO15047 1707 aaKnown RBP17.31■□□□□ 0.36
PTPN6-201ENST00000318974 ARHGEF28Q8N1W1 1705 aaKnown RBP17.31■□□□□ 0.36
PTPN6-201ENST00000318974 METP08581 1390 aa17.3■□□□□ 0.36
PTPN6-201ENST00000318974 ZNF142P52746 1687 aaPredicted RBP17.3■□□□□ 0.36
PTPN6-201ENST00000318974 ADAMTS13Q76LX8 1427 aa17.3■□□□□ 0.36
PTPN6-201ENST00000318974 QRICH2Q9H0J4 1663 aa17.29■□□□□ 0.36
PTPN6-201ENST00000318974 ABCC11Q96J66 1382 aa17.29■□□□□ 0.36
PTPN6-201ENST00000318974 PRAM1Q96QH2 718 aa17.28■□□□□ 0.36
PTPN6-201ENST00000318974 POGKQ9P215 609 aa17.28■□□□□ 0.36
PTPN6-201ENST00000318974 DLC1Q96QB1 1528 aa17.28■□□□□ 0.36
PTPN6-201ENST00000318974 MED14O60244 1454 aa17.26■□□□□ 0.35
PTPN6-201ENST00000318974 SETD1BQ9UPS6 1966 aaKnown RBP17.26■□□□□ 0.35
PTPN6-201ENST00000318974 SAFB2Q14151 953 aaKnown RBP eCLIP17.26■□□□□ 0.35
PTPN6-201ENST00000318974 ANKLE2Q86XL3 938 aa17.25■□□□□ 0.35
PTPN6-201ENST00000318974 TBX22Q9Y458 520 aa17.25■□□□□ 0.35
PTPN6-201ENST00000318974 EVC2Q86UK5 1308 aa17.25■□□□□ 0.35
PTPN6-201ENST00000318974 PRKRIP1Q9H875 184 aaPredicted RBP17.25■□□□□ 0.35
PTPN6-201ENST00000318974 PANK3Q9H999 370 aa17.25■□□□□ 0.35
PTPN6-201ENST00000318974 SLC26A8Q96RN1 970 aa17.24■□□□□ 0.35
PTPN6-201ENST00000318974 SIRT1Q96EB6 747 aa17.24■□□□□ 0.35
PTPN6-201ENST00000318974 PUS7Q96PZ0 661 aaKnown RBP17.24■□□□□ 0.35
PTPN6-201ENST00000318974 TECPR2O15040 1411 aa17.23■□□□□ 0.35
PTPN6-201ENST00000318974 DIP2AQ14689 1571 aa17.22■□□□□ 0.35
PTPN6-201ENST00000318974 PER1O15534 1290 aaPredicted RBP17.22■□□□□ 0.35
PTPN6-201ENST00000318974 TULP4Q9NRJ4 1543 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms