RNA–Protein interactions for RNA: ENST00000316788.11

AP3S1-201, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AP3S1, Length 1,730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-201ENST00000316788 RGL3Q3MIN7 710 aa26.33■■□□□ 1.81
AP3S1-201ENST00000316788 ARHGEF40Q8TER5 1519 aa26.31■■□□□ 1.8
AP3S1-201ENST00000316788 MADDQ8WXG6 1647 aa26.3■■□□□ 1.8
AP3S1-201ENST00000316788 VWDEQ8N2E2 1590 aa26.3■■□□□ 1.8
AP3S1-201ENST00000316788 DISP3Q9P2K9 1392 aa26.28■■□□□ 1.8
AP3S1-201ENST00000316788 TET3O43151 1660 aa26.28■■□□□ 1.8
AP3S1-201ENST00000316788 TMF1P82094 1093 aa26.28■■□□□ 1.8
AP3S1-201ENST00000316788 CEP152O94986 1710 aa26.27■■□□□ 1.8
AP3S1-201ENST00000316788 SIGLEC1Q9BZZ2 1709 aa26.27■■□□□ 1.8
AP3S1-201ENST00000316788 PDE3BQ13370 1112 aa26.26■■□□□ 1.79
AP3S1-201ENST00000316788 IQGAP1P46940 1657 aa26.26■■□□□ 1.79
AP3S1-201ENST00000316788 SPHKAPQ2M3C7 1700 aa26.26■■□□□ 1.79
AP3S1-201ENST00000316788 B4GALNT3Q6L9W6 998 aa26.22■■□□□ 1.79
AP3S1-201ENST00000316788 CNGB1Q14028 1251 aaPredicted RBP26.21■■□□□ 1.79
AP3S1-201ENST00000316788 KANK1Q14678 1352 aa26.2■■□□□ 1.79
AP3S1-201ENST00000316788 BLMP54132 1417 aaPredicted RBP26.2■■□□□ 1.78
AP3S1-201ENST00000316788 KIAA1210Q9ULL0 1709 aa26.19■■□□□ 1.78
AP3S1-201ENST00000316788 CLTCL1P53675 1640 aa26.19■■□□□ 1.78
AP3S1-201ENST00000316788 SCAF11Q99590 1463 aaKnown RBP26.18■■□□□ 1.78
AP3S1-201ENST00000316788 KIF3BO15066 747 aa26.15■■□□□ 1.78
AP3S1-201ENST00000316788 SYNMO15061 1565 aa26.15■■□□□ 1.78
AP3S1-201ENST00000316788 CDCA8Q53HL2 280 aa26.14■■□□□ 1.78
AP3S1-201ENST00000316788 PANK3Q9H999 370 aa26.14■■□□□ 1.78
AP3S1-201ENST00000316788 REREQ9P2R6 1566 aa26.14■■□□□ 1.78
AP3S1-201ENST00000316788 MLECQ14165 292 aa26.13■■□□□ 1.77
AP3S1-201ENST00000316788 MYOM2P54296 1465 aa26.12■■□□□ 1.77
AP3S1-201ENST00000316788 MROH1Q8NDA8 1641 aa26.11■■□□□ 1.77
AP3S1-201ENST00000316788 EIF3AQ14152 1382 aaKnown RBP26.09■■□□□ 1.77
AP3S1-201ENST00000316788 SLC24A1O60721 1099 aa26.09■■□□□ 1.77
AP3S1-201ENST00000316788 GGT6Q6P531 493 aa26.09■■□□□ 1.77
AP3S1-201ENST00000316788 LMTK2Q8IWU2 1503 aa26.09■■□□□ 1.77
AP3S1-201ENST00000316788 NPC1L1Q9UHC9 1359 aa26.09■■□□□ 1.77
AP3S1-201ENST00000316788 AGLP35573 1532 aa26.08■■□□□ 1.77
AP3S1-201ENST00000316788 RRP1P56182 461 aaKnown RBP26.08■■□□□ 1.76
AP3S1-201ENST00000316788 CCDC136Q96JN2 1154 aa26.08■■□□□ 1.76
AP3S1-201ENST00000316788 MSH5O43196 834 aa26.05■■□□□ 1.76
AP3S1-201ENST00000316788 EFCAB6Q5THR3 1501 aa26.05■■□□□ 1.76
AP3S1-201ENST00000316788 RCAN3Q9UKA8 241 aa26.04■■□□□ 1.76
AP3S1-201ENST00000316788 CC2D1BQ5T0F9 858 aaKnown RBP26.03■■□□□ 1.76
AP3S1-201ENST00000316788 ASXL1Q8IXJ9 1541 aa26.01■■□□□ 1.75
AP3S1-201ENST00000316788 PIK3C2GO75747 1445 aa26■■□□□ 1.75
AP3S1-201ENST00000316788 NRXN1Q9ULB1 1477 aa25.99■■□□□ 1.75
AP3S1-201ENST00000316788 KNSTRNQ9Y448 316 aa25.99■■□□□ 1.75
AP3S1-201ENST00000316788 AMER1Q5JTC6 1135 aaPredicted RBP25.98■■□□□ 1.75
AP3S1-201ENST00000316788 MYOM1P52179 1685 aa25.98■■□□□ 1.75
AP3S1-201ENST00000316788 IFT172Q9UG01 1749 aa25.97■■□□□ 1.75
AP3S1-201ENST00000316788 KDM5AP29375 1690 aaKnown RBP25.95■■□□□ 1.75
AP3S1-201ENST00000316788 MYO3AQ8NEV4 1616 aa25.94■■□□□ 1.74
AP3S1-201ENST00000316788 SBNO2Q9Y2G9 1366 aa25.93■■□□□ 1.74
AP3S1-201ENST00000316788 KIF1BO60333 1816 aa25.93■■□□□ 1.74
AP3S1-201ENST00000316788 PPP2R1AP30153 589 aa25.93■■□□□ 1.74
AP3S1-201ENST00000316788 ADGRB3O60242 1522 aa25.91■■□□□ 1.74
AP3S1-201ENST00000316788 SETBP1Q9Y6X0 1596 aa25.91■■□□□ 1.74
AP3S1-201ENST00000316788 ERVK-7P63135 1459 aa25.88■■□□□ 1.73
AP3S1-201ENST00000316788 ABCC3O15438 1527 aa25.88■■□□□ 1.73
AP3S1-201ENST00000316788 ADAMTSL3P82987 1691 aa25.86■■□□□ 1.73
AP3S1-201ENST00000316788 SENP3-EIF4A1A0A087X0R7 540 aa25.86■■□□□ 1.73
AP3S1-201ENST00000316788 UGGT1Q9NYU2 1555 aa25.86■■□□□ 1.73
AP3S1-201ENST00000316788 CLTCQ00610 1675 aaKnown RBP25.86■■□□□ 1.73
AP3S1-201ENST00000316788 ERICH6Q7L0X2 663 aa25.85■■□□□ 1.73
AP3S1-201ENST00000316788 EXOC6Q8TAG9 804 aa25.85■■□□□ 1.73
AP3S1-201ENST00000316788 KDM4FA0A1W2PPD8 638 aa25.85■■□□□ 1.73
AP3S1-201ENST00000316788 CDCA7LQ96GN5 454 aa25.85■■□□□ 1.73
AP3S1-201ENST00000316788 ADAMTS8Q9UP79 889 aa25.85■■□□□ 1.73
AP3S1-201ENST00000316788 MROH2AA6NES4 1674 aa25.84■■□□□ 1.73
AP3S1-201ENST00000316788 WDR43Q15061 677 aaKnown RBP eCLIP25.84■■□□□ 1.73
AP3S1-201ENST00000316788 FER1L4A9Z1Z3 1794 aa25.83■■□□□ 1.73
AP3S1-201ENST00000316788 ZNF521Q96K83 1311 aa25.83■■□□□ 1.72
AP3S1-201ENST00000316788 PLPPR3Q6T4P5 718 aa25.82■■□□□ 1.72
AP3S1-201ENST00000316788 ESF1Q9H501 851 aaKnown RBP25.82■■□□□ 1.72
AP3S1-201ENST00000316788 PPP6R1Q9UPN7 881 aa25.82■■□□□ 1.72
AP3S1-201ENST00000316788 SALL2Q9Y467 1007 aaPredicted RBP25.82■■□□□ 1.72
AP3S1-201ENST00000316788 ADGRF5Q8IZF2 1346 aa25.81■■□□□ 1.72
AP3S1-201ENST00000316788 TCERG1O14776 1098 aaKnown RBP25.81■■□□□ 1.72
AP3S1-201ENST00000316788 CEBPAP49715 358 aaPredicted RBP25.8■■□□□ 1.72
AP3S1-201ENST00000316788 CFAP70Q5T0N1 1121 aa25.8■■□□□ 1.72
AP3S1-201ENST00000316788 RIMS1Q86UR5 1692 aaKnown RBP25.8■■□□□ 1.72
AP3S1-201ENST00000316788 ZMYM3Q14202 1370 aa25.78■■□□□ 1.72
AP3S1-201ENST00000316788 CAMSAP1Q5T5Y3 1602 aa25.78■■□□□ 1.72
AP3S1-201ENST00000316788 NGEFQ8N5V2 710 aa25.78■■□□□ 1.72
AP3S1-201ENST00000316788 ZC3H13Q5T200 1668 aaKnown RBP25.78■■□□□ 1.72
AP3S1-201ENST00000316788 RPGRIP1LQ68CZ1 1315 aa25.78■■□□□ 1.72
AP3S1-201ENST00000316788 MS4A1P11836 297 aa25.77■■□□□ 1.72
AP3S1-201ENST00000316788 NPATQ14207 1427 aa25.77■■□□□ 1.72
AP3S1-201ENST00000316788 PLEKHH1Q9ULM0 1364 aa25.76■■□□□ 1.71
AP3S1-201ENST00000316788 FBXO31Q5XUX0 539 aaPredicted RBP25.76■■□□□ 1.71
AP3S1-201ENST00000316788 NOS1P29475 1434 aa25.75■■□□□ 1.71
AP3S1-201ENST00000316788 PPLO60437 1756 aa25.74■■□□□ 1.71
AP3S1-201ENST00000316788 ANP32AP39687 249 aaKnown RBP25.72■■□□□ 1.71
AP3S1-201ENST00000316788 DUSP27Q5VZP5 1158 aa25.72■■□□□ 1.71
AP3S1-201ENST00000316788 ADGRB1O14514 1584 aa25.72■■□□□ 1.71
AP3S1-201ENST00000316788 GOLGA2Q08379 1002 aa25.71■■□□□ 1.71
AP3S1-201ENST00000316788 NOP58Q9Y2X3 529 aaKnown RBP25.71■■□□□ 1.71
AP3S1-201ENST00000316788 CFAP65Q6ZU64 1925 aaKnown RBP25.71■■□□□ 1.71
AP3S1-201ENST00000316788 C3P01024 1663 aa25.71■■□□□ 1.71
AP3S1-201ENST00000316788 CENPJQ9HC77 1338 aaPredicted RBP25.7■■□□□ 1.71
AP3S1-201ENST00000316788 C14orf93Q9H972 538 aaKnown RBP25.7■■□□□ 1.7
AP3S1-201ENST00000316788 PTPRMP28827 1452 aa25.7■■□□□ 1.7
AP3S1-201ENST00000316788 ARHGAP31Q2M1Z3 1444 aa25.69■■□□□ 1.7
AP3S1-201ENST00000316788 TRMT2AQ8IZ69 625 aaKnown RBP25.69■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms