RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 STAC3Q96MF2 364 aa19.65■□□□□ 0.74
VRK3-201ENST00000316763 WASHC2AQ641Q2 1341 aa19.65■□□□□ 0.74
VRK3-201ENST00000316763 RALGAPBQ86X10 1494 aa19.65■□□□□ 0.74
VRK3-201ENST00000316763 KIF1BO60333 1816 aa19.63■□□□□ 0.73
VRK3-201ENST00000316763 ZNF326Q5BKZ1 582 aaKnown RBP19.63■□□□□ 0.73
VRK3-201ENST00000316763 ADGRB3O60242 1522 aa19.62■□□□□ 0.73
VRK3-201ENST00000316763 MYO3AQ8NEV4 1616 aa19.61■□□□□ 0.73
VRK3-201ENST00000316763 NLRP1Q9C000 1473 aa19.61■□□□□ 0.73
VRK3-201ENST00000316763 CHGAP10645 457 aaKnown RBP19.61■□□□□ 0.73
VRK3-201ENST00000316763 MYO5BQ9ULV0 1848 aa19.6■□□□□ 0.73
VRK3-201ENST00000316763 POLR1AO95602 1720 aaPredicted RBP19.59■□□□□ 0.73
VRK3-201ENST00000316763 TMEM131LA2VDJ0 1609 aa19.58■□□□□ 0.73
VRK3-201ENST00000316763 CCDC7Q96M83 1385 aa19.58■□□□□ 0.72
VRK3-201ENST00000316763 STAG3Q9UJ98 1225 aa19.58■□□□□ 0.72
VRK3-201ENST00000316763 UBR1Q8IWV7 1749 aa19.57■□□□□ 0.72
VRK3-201ENST00000316763 TRPM1Q7Z4N2 1603 aa19.57■□□□□ 0.72
VRK3-201ENST00000316763 GPRASP1Q5JY77 1395 aa19.56■□□□□ 0.72
VRK3-201ENST00000316763 A2ML1A8K2U0 1454 aa19.56■□□□□ 0.72
VRK3-201ENST00000316763 MYOM2P54296 1465 aa19.56■□□□□ 0.72
VRK3-201ENST00000316763 CEP170BQ9Y4F5 1589 aaPredicted RBP19.55■□□□□ 0.72
VRK3-201ENST00000316763 KDM5AP29375 1690 aaKnown RBP19.55■□□□□ 0.72
VRK3-201ENST00000316763 ZNF142P52746 1687 aaPredicted RBP19.55■□□□□ 0.72
VRK3-201ENST00000316763 RPGRIP1LQ68CZ1 1315 aa19.54■□□□□ 0.72
VRK3-201ENST00000316763 ROCK2O75116 1388 aaKnown RBP19.54■□□□□ 0.72
VRK3-201ENST00000316763 USP47Q96K76 1375 aa19.53■□□□□ 0.72
VRK3-201ENST00000316763 CARD11Q9BXL7 1154 aa19.53■□□□□ 0.72
VRK3-201ENST00000316763 IFT172Q9UG01 1749 aa19.52■□□□□ 0.72
VRK3-201ENST00000316763 NRXN1Q9ULB1 1477 aa19.52■□□□□ 0.72
VRK3-201ENST00000316763 NEFLP07196 543 aa19.51■□□□□ 0.71
VRK3-201ENST00000316763 NBPF1Q3BBV0 1214 aa19.51■□□□□ 0.71
VRK3-201ENST00000316763 THEMISQ8N1K5 641 aaPredicted RBP19.51■□□□□ 0.71
VRK3-201ENST00000316763 LAMC1P11047 1609 aa19.5■□□□□ 0.71
VRK3-201ENST00000316763 C11orf95C9JLR9 678 aaPredicted RBP19.49■□□□□ 0.71
VRK3-201ENST00000316763 ADGRF5Q8IZF2 1346 aa19.48■□□□□ 0.71
VRK3-201ENST00000316763 PPLO60437 1756 aa19.47■□□□□ 0.71
VRK3-201ENST00000316763 KIF7Q2M1P5 1343 aa19.46■□□□□ 0.71
VRK3-201ENST00000316763 TMEM2Q9UHN6 1383 aa19.46■□□□□ 0.71
VRK3-201ENST00000316763 LMTK3Q96Q04 1460 aa19.46■□□□□ 0.71
VRK3-201ENST00000316763 NEXMIFQ5QGS0 1516 aa19.46■□□□□ 0.71
VRK3-201ENST00000316763 NUTM2DQ5VT03 806 aaPredicted RBP19.45■□□□□ 0.7
VRK3-201ENST00000316763 KIAA1210Q9ULL0 1709 aa19.45■□□□□ 0.7
VRK3-201ENST00000316763 RIMS2Q9UQ26 1411 aa19.45■□□□□ 0.7
VRK3-201ENST00000316763 FKBP8Q14318 412 aa19.45■□□□□ 0.7
VRK3-201ENST00000316763 PIK3C2GO75747 1445 aa19.44■□□□□ 0.7
VRK3-201ENST00000316763 ZFYVE9O95405 1425 aa19.44■□□□□ 0.7
VRK3-201ENST00000316763 PRKRIP1Q9H875 184 aaPredicted RBP19.44■□□□□ 0.7
VRK3-201ENST00000316763 SLIT1O75093 1534 aa19.44■□□□□ 0.7
VRK3-201ENST00000316763 HNRNPUQ00839 825 aaKnown RBP eCLIP19.43■□□□□ 0.7
VRK3-201ENST00000316763 ARHGAP23Q9P227 1491 aa19.43■□□□□ 0.7
VRK3-201ENST00000316763 VGFO15240 615 aaPredicted RBP19.43■□□□□ 0.7
VRK3-201ENST00000316763 HSPA2P54652 639 aa19.43■□□□□ 0.7
VRK3-201ENST00000316763 LTKP29376 864 aa19.42■□□□□ 0.7
VRK3-201ENST00000316763 TXNDC2Q86VQ3 553 aa19.41■□□□□ 0.7
VRK3-201ENST00000316763 ST20-MTHFSA0A0A6YYL1 179 aa19.41■□□□□ 0.7
VRK3-201ENST00000316763 HDGFP51858 240 aaKnown RBP19.41■□□□□ 0.7
VRK3-201ENST00000316763 AEBP2Q6ZN18 517 aaPredicted RBP19.41■□□□□ 0.7
VRK3-201ENST00000316763 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.41■□□□□ 0.7
VRK3-201ENST00000316763 CFAP70Q5T0N1 1121 aa19.4■□□□□ 0.7
VRK3-201ENST00000316763 EID1Q9Y6B2 187 aa19.4■□□□□ 0.7
VRK3-201ENST00000316763 C14orf93Q9H972 538 aaKnown RBP19.39■□□□□ 0.69
VRK3-201ENST00000316763 ANKLE2Q86XL3 938 aa19.38■□□□□ 0.69
VRK3-201ENST00000316763 SENP3Q9H4L4 574 aaPredicted RBP19.38■□□□□ 0.69
VRK3-201ENST00000316763 SCAF11Q99590 1463 aaKnown RBP19.37■□□□□ 0.69
VRK3-201ENST00000316763 SETBP1Q9Y6X0 1596 aa19.36■□□□□ 0.69
VRK3-201ENST00000316763 IQGAP1P46940 1657 aa19.36■□□□□ 0.69
VRK3-201ENST00000316763 MRS2Q9HD23 443 aa19.35■□□□□ 0.69
VRK3-201ENST00000316763 NCKAP5LQ9HCH0 1330 aa19.35■□□□□ 0.69
VRK3-201ENST00000316763 TESK2Q96S53 571 aa19.34■□□□□ 0.69
VRK3-201ENST00000316763 ADGRB1O14514 1584 aa19.33■□□□□ 0.68
VRK3-201ENST00000316763 BCANQ96GW7 911 aa19.33■□□□□ 0.68
VRK3-201ENST00000316763 STRCQ7RTU9 1775 aa19.32■□□□□ 0.68
VRK3-201ENST00000316763 PLEKHG1Q9ULL1 1385 aa19.32■□□□□ 0.68
VRK3-201ENST00000316763 CCDC184Q52MB2 194 aa19.31■□□□□ 0.68
VRK3-201ENST00000316763 EIF3AQ14152 1382 aaKnown RBP19.3■□□□□ 0.68
VRK3-201ENST00000316763 NRXN3Q9Y4C0 1643 aa19.3■□□□□ 0.68
VRK3-201ENST00000316763 POLR3GLQ9BT43 218 aa19.29■□□□□ 0.68
VRK3-201ENST00000316763 MED14O60244 1454 aa19.29■□□□□ 0.68
VRK3-201ENST00000316763 FAM9BQ8IZU0 186 aa19.29■□□□□ 0.68
VRK3-201ENST00000316763 NPHP4O75161 1426 aaPredicted RBP19.27■□□□□ 0.68
VRK3-201ENST00000316763 ALKQ9UM73 1620 aa19.27■□□□□ 0.68
VRK3-201ENST00000316763 SLC26A8Q96RN1 970 aa19.27■□□□□ 0.67
VRK3-201ENST00000316763 ADAMTS13Q76LX8 1427 aa19.26■□□□□ 0.67
VRK3-201ENST00000316763 ZBED9Q6R2W3 1325 aa19.25■□□□□ 0.67
VRK3-201ENST00000316763 TMEM132EQ6IEE7 984 aa19.25■□□□□ 0.67
VRK3-201ENST00000316763 SETD1AO15047 1707 aaKnown RBP19.24■□□□□ 0.67
VRK3-201ENST00000316763 TSHZ2Q9NRE2 1034 aa19.24■□□□□ 0.67
VRK3-201ENST00000316763 DISP3Q9P2K9 1392 aa19.24■□□□□ 0.67
VRK3-201ENST00000316763 ASXL1Q8IXJ9 1541 aa19.23■□□□□ 0.67
VRK3-201ENST00000316763 TMF1P82094 1093 aa19.23■□□□□ 0.67
VRK3-201ENST00000316763 TBX22Q9Y458 520 aa19.23■□□□□ 0.67
VRK3-201ENST00000316763 SBNO2Q9Y2G9 1366 aa19.22■□□□□ 0.67
VRK3-201ENST00000316763 SLC24A1O60721 1099 aa19.21■□□□□ 0.67
VRK3-201ENST00000316763 ERICH6BQ5W0A0 696 aa19.2■□□□□ 0.66
VRK3-201ENST00000316763 TRAK1Q9UPV9 953 aa19.2■□□□□ 0.66
VRK3-201ENST00000316763 METP08581 1390 aa19.2■□□□□ 0.66
VRK3-201ENST00000316763 DIP2AQ14689 1571 aa19.2■□□□□ 0.66
VRK3-201ENST00000316763 KTN1Q86UP2 1357 aaKnown RBP19.19■□□□□ 0.66
VRK3-201ENST00000316763 CENPJQ9HC77 1338 aaPredicted RBP19.18■□□□□ 0.66
VRK3-201ENST00000316763 DMRT2Q9Y5R5 561 aa19.17■□□□□ 0.66
VRK3-201ENST00000316763 YTHDC2Q9H6S0 1430 aaKnown RBP19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms