RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 QPCTQ16769 361 aa7.5□□□□□ -1.21
SMCO3-201ENST00000316048 COG6Q9Y2V7 657 aa7.5□□□□□ -1.21
SMCO3-201ENST00000316048 TRIM6-TRIM34B2RNG4 842 aa7.49□□□□□ -1.21
SMCO3-201ENST00000316048 NDUFV2P19404 249 aa7.49□□□□□ -1.21
SMCO3-201ENST00000316048 TATDN2Q93075 761 aa7.49□□□□□ -1.21
SMCO3-201ENST00000316048 TMEM134Q9H6X4 195 aa7.49□□□□□ -1.21
SMCO3-201ENST00000316048 SCUBE2Q9NQ36 999 aa7.49□□□□□ -1.21
SMCO3-201ENST00000316048 SPDYE5A6NIY4 337 aa7.48□□□□□ -1.21
SMCO3-201ENST00000316048 DNAJB2P25686 324 aa7.48□□□□□ -1.21
SMCO3-201ENST00000316048 RSBN1LQ6PCB5 846 aaPredicted RBP7.48□□□□□ -1.21
SMCO3-201ENST00000316048 KCNK17Q96T54 332 aa7.48□□□□□ -1.21
SMCO3-201ENST00000316048 PCDHB15Q9Y5E8 787 aa7.48□□□□□ -1.21
SMCO3-201ENST00000316048 NBPF26B4DH59 902 aa7.48□□□□□ -1.21
SMCO3-201ENST00000316048 MTMR14Q8NCE2 650 aa7.48□□□□□ -1.21
SMCO3-201ENST00000316048 TRIM26Q12899 539 aaPredicted RBP7.46□□□□□ -1.21
SMCO3-201ENST00000316048 PPP2R2DQ66LE6 453 aa7.46□□□□□ -1.21
SMCO3-201ENST00000316048 SPTLC1O15269 473 aa7.46□□□□□ -1.22
SMCO3-201ENST00000316048 NUTM1Q86Y26 1132 aa7.46□□□□□ -1.22
SMCO3-201ENST00000316048 PODXL2Q9NZ53 605 aa7.46□□□□□ -1.22
SMCO3-201ENST00000316048 RAD21O60216 631 aa7.45□□□□□ -1.22
SMCO3-201ENST00000316048 HOXB1P14653 301 aaPredicted RBP7.45□□□□□ -1.22
SMCO3-201ENST00000316048 DIXDC1Q155Q3 683 aa7.45□□□□□ -1.22
SMCO3-201ENST00000316048 RDH13Q8NBN7 331 aa7.45□□□□□ -1.22
SMCO3-201ENST00000316048 CABLES1Q8TDN4 633 aa7.45□□□□□ -1.22
SMCO3-201ENST00000316048 HLA-CQ95604 372 aa7.45□□□□□ -1.22
SMCO3-201ENST00000316048 RTL5Q5HYW3 569 aaPredicted RBP7.45□□□□□ -1.22
SMCO3-201ENST00000316048 SULF1Q8IWU6 871 aa7.45□□□□□ -1.22
SMCO3-201ENST00000316048 GDPD2Q9HCC8 539 aa7.45□□□□□ -1.22
SMCO3-201ENST00000316048 PSDA5PKW4 1024 aaPredicted RBP7.44□□□□□ -1.22
SMCO3-201ENST00000316048 PSEN2P49810 448 aa7.44□□□□□ -1.22
SMCO3-201ENST00000316048 HRCP23327 699 aa7.43□□□□□ -1.22
SMCO3-201ENST00000316048 GUCA2AQ02747 115 aa7.43□□□□□ -1.22
SMCO3-201ENST00000316048 PACS2Q86VP3 889 aa7.43□□□□□ -1.22
SMCO3-201ENST00000316048 BANK1Q8NDB2 785 aa7.43□□□□□ -1.22
SMCO3-201ENST00000316048 LILRB3O75022 631 aa7.43□□□□□ -1.22
SMCO3-201ENST00000316048 KIAA1468Q9P260 1216 aa7.42□□□□□ -1.22
SMCO3-201ENST00000316048 AP1G2O75843 785 aa7.42□□□□□ -1.22
SMCO3-201ENST00000316048 SLC10A3P09131 477 aa7.42□□□□□ -1.22
SMCO3-201ENST00000316048 TMEM259Q4ZIN3 620 aa7.42□□□□□ -1.22
SMCO3-201ENST00000316048 POTEEQ6S8J3 1075 aa7.42□□□□□ -1.22
SMCO3-201ENST00000316048 ZBED2Q9BTP6 218 aa7.42□□□□□ -1.22
SMCO3-201ENST00000316048 SEPT9Q9UHD8 586 aaPredicted RBP7.42□□□□□ -1.22
SMCO3-201ENST00000316048 KDM4AO75164 1064 aa7.41□□□□□ -1.22
SMCO3-201ENST00000316048 MAMSTRQ6ZN01 415 aa7.41□□□□□ -1.22
SMCO3-201ENST00000316048 PLSCR2Q9NRY7 297 aa7.41□□□□□ -1.22
SMCO3-201ENST00000316048 TBC1D2BQ9UPU7 963 aa7.41□□□□□ -1.22
SMCO3-201ENST00000316048 HOXA2O43364 376 aa7.4□□□□□ -1.22
SMCO3-201ENST00000316048 TUSC1Q2TAM9 212 aa7.4□□□□□ -1.22
SMCO3-201ENST00000316048 SWT1Q5T5J6 900 aaKnown RBP7.4□□□□□ -1.22
SMCO3-201ENST00000316048 PCDHGC3Q9UN70 934 aa7.4□□□□□ -1.22
SMCO3-201ENST00000316048 ZNF330Q9Y3S2 320 aaPredicted RBP7.4□□□□□ -1.22
SMCO3-201ENST00000316048 NISCHQ9Y2I1 1504 aa7.4□□□□□ -1.22
SMCO3-201ENST00000316048 USP17L8P0C7I0 530 aa7.4□□□□□ -1.23
SMCO3-201ENST00000316048 ABL2P42684 1182 aa7.4□□□□□ -1.23
SMCO3-201ENST00000316048 AXIN2Q9Y2T1 843 aa7.4□□□□□ -1.23
SMCO3-201ENST00000316048 POM121CA8CG34 1229 aa7.39□□□□□ -1.23
SMCO3-201ENST00000316048 NUTM2BA6NNL0 878 aaPredicted RBP7.39□□□□□ -1.23
SMCO3-201ENST00000316048 NUTM2EB1AL46 878 aaPredicted RBP7.39□□□□□ -1.23
SMCO3-201ENST00000316048 GCGRP47871 477 aa7.39□□□□□ -1.23
SMCO3-201ENST00000316048 NUTM2DQ5VT03 806 aaPredicted RBP7.39□□□□□ -1.23
SMCO3-201ENST00000316048 DMRTA1Q5VZB9 504 aa7.39□□□□□ -1.23
SMCO3-201ENST00000316048 NUTM2AQ8IVF1 878 aaPredicted RBP7.39□□□□□ -1.23
SMCO3-201ENST00000316048 HMX1Q9NP08 348 aaPredicted RBP7.38□□□□□ -1.23
SMCO3-201ENST00000316048 FDX1P10109 184 aa7.37□□□□□ -1.23
SMCO3-201ENST00000316048 CCDC97Q96F63 343 aaPredicted RBP7.37□□□□□ -1.23
SMCO3-201ENST00000316048 SNPHO15079 494 aa7.36□□□□□ -1.23
SMCO3-201ENST00000316048 GJA5P36382 358 aa7.36□□□□□ -1.23
SMCO3-201ENST00000316048 OTUD5Q96G74 571 aa7.36□□□□□ -1.23
SMCO3-201ENST00000316048 GJD4Q96KN9 370 aaPredicted RBP7.36□□□□□ -1.23
SMCO3-201ENST00000316048 GPR37L1O60883 481 aa7.36□□□□□ -1.23
SMCO3-201ENST00000316048 VARS2Q5ST30 1063 aaKnown RBP7.36□□□□□ -1.23
SMCO3-201ENST00000316048 CTDSPL2Q05D32 466 aa7.35□□□□□ -1.23
SMCO3-201ENST00000316048 ZBTB3Q9H5J0 574 aa7.35□□□□□ -1.23
SMCO3-201ENST00000316048 PRPF38BQ5VTL8 546 aaKnown RBP7.34□□□□□ -1.23
SMCO3-201ENST00000316048 NECTIN2Q92692 538 aa7.34□□□□□ -1.23
SMCO3-201ENST00000316048 SERPINA10Q9UK55 444 aa7.34□□□□□ -1.23
SMCO3-201ENST00000316048 FUT2Q10981 343 aa7.34□□□□□ -1.23
SMCO3-201ENST00000316048 TSC1Q92574 1164 aa7.34□□□□□ -1.23
SMCO3-201ENST00000316048 KCNH8Q96L42 1107 aa7.34□□□□□ -1.23
SMCO3-201ENST00000316048 RABGEF1Q9UJ41 708 aa7.34□□□□□ -1.23
SMCO3-201ENST00000316048 CFAP99D6REC4 459 aa7.33□□□□□ -1.24
SMCO3-201ENST00000316048 LRRN4Q8WUT4 740 aa7.33□□□□□ -1.24
SMCO3-201ENST00000316048 SYMPKQ92797 1274 aaKnown RBP7.33□□□□□ -1.24
SMCO3-201ENST00000316048 GLMNQ92990 594 aa7.33□□□□□ -1.24
SMCO3-201ENST00000316048 PDIA4P13667 645 aaKnown RBP7.33□□□□□ -1.24
SMCO3-201ENST00000316048 USP46P62068 366 aa7.33□□□□□ -1.24
SMCO3-201ENST00000316048 IRF5Q13568 498 aa7.33□□□□□ -1.24
SMCO3-201ENST00000316048 SAMD7Q7Z3H4 446 aa7.33□□□□□ -1.24
SMCO3-201ENST00000316048 EPS8L1Q8TE68 723 aa7.33□□□□□ -1.24
SMCO3-201ENST00000316048 TRIM34Q9BYJ4 488 aa7.33□□□□□ -1.24
SMCO3-201ENST00000316048 ERBB3P21860 1342 aa7.32□□□□□ -1.24
SMCO3-201ENST00000316048 RNF40O75150 1001 aa7.32□□□□□ -1.24
SMCO3-201ENST00000316048 ADAMTS19Q8TE59 1207 aa7.32□□□□□ -1.24
SMCO3-201ENST00000316048 ARHGAP33O14559 1287 aa7.31□□□□□ -1.24
SMCO3-201ENST00000316048 CFHP08603 1231 aa7.31□□□□□ -1.24
SMCO3-201ENST00000316048 MTMR2Q13614 643 aa7.31□□□□□ -1.24
SMCO3-201ENST00000316048 CALR3Q96L12 384 aaKnown RBP7.31□□□□□ -1.24
SMCO3-201ENST00000316048 MARVELD3Q96A59 401 aa7.31□□□□□ -1.24
SMCO3-201ENST00000316048 SOCS7O14512 581 aa7.3□□□□□ -1.24
SMCO3-201ENST00000316048 FAM98CQ17RN3 349 aaKnown RBP7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms