RNA–Protein interactions for RNA: ENST00000309996.6

SPTBN2-201, Transcript of spectrin beta, non-erythrocytic 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN2, Length 7,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN2-201ENST00000309996 SPDYE4A6NLX3 237 aa15.69■□□□□ 0.1
SPTBN2-201ENST00000309996 RUFY1Q96T51 708 aa15.69■□□□□ 0.1
SPTBN2-201ENST00000309996 NEXNQ0ZGT2 675 aa15.69■□□□□ 0.1
SPTBN2-201ENST00000309996 SKOR2Q2VWA4 1001 aaPredicted RBP15.68■□□□□ 0.1
SPTBN2-201ENST00000309996 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.68■□□□□ 0.1
SPTBN2-201ENST00000309996 TRDNQ13061 729 aa15.68■□□□□ 0.1
SPTBN2-201ENST00000309996 RSPH6AQ9H0K4 717 aa15.68■□□□□ 0.1
SPTBN2-201ENST00000309996 HOMER1Q86YM7 354 aa15.68■□□□□ 0.1
SPTBN2-201ENST00000309996 SETD5Q9C0A6 1442 aa15.67■□□□□ 0.1
SPTBN2-201ENST00000309996 CCDC27Q2M243 656 aa15.67■□□□□ 0.1
SPTBN2-201ENST00000309996 TIMELESSQ9UNS1 1208 aa15.67■□□□□ 0.1
SPTBN2-201ENST00000309996 TNIKQ9UKE5 1360 aa15.67■□□□□ 0.1
SPTBN2-201ENST00000309996 ANKRD45Q5TZF3 282 aa15.66■□□□□ 0.1
SPTBN2-201ENST00000309996 CDR1P51861 262 aa15.65■□□□□ 0.1
SPTBN2-201ENST00000309996 DIAPH3Q9NSV4 1193 aa15.65■□□□□ 0.1
SPTBN2-201ENST00000309996 NUTM2DQ5VT03 806 aaPredicted RBP15.65■□□□□ 0.1
SPTBN2-201ENST00000309996 C9orf78Q9NZ63 289 aaPredicted RBP15.65■□□□□ 0.1
SPTBN2-201ENST00000309996 MTMR7Q9Y216 660 aa15.64■□□□□ 0.1
SPTBN2-201ENST00000309996 ZRSR2Q15696 482 aaKnown RBP15.64■□□□□ 0.09
SPTBN2-201ENST00000309996 IBSPP21815 317 aaPredicted RBP15.64■□□□□ 0.09
SPTBN2-201ENST00000309996 CCDC173Q0VFZ6 552 aa15.64■□□□□ 0.09
SPTBN2-201ENST00000309996 CPLX1O14810 134 aa15.64■□□□□ 0.09
SPTBN2-201ENST00000309996 TEFQ10587 303 aa15.63■□□□□ 0.09
SPTBN2-201ENST00000309996 RUFY2Q8WXA3 655 aa15.63■□□□□ 0.09
SPTBN2-201ENST00000309996 TMEM87AQ8NBN3 555 aa15.62■□□□□ 0.09
SPTBN2-201ENST00000309996 MAP7D2Q96T17 732 aa15.62■□□□□ 0.09
SPTBN2-201ENST00000309996 OFD1O75665 1012 aa15.62■□□□□ 0.09
SPTBN2-201ENST00000309996 NOM1Q5C9Z4 860 aaKnown RBP15.62■□□□□ 0.09
SPTBN2-201ENST00000309996 PSME1Q06323 249 aa15.61■□□□□ 0.09
SPTBN2-201ENST00000309996 PHLDB1Q86UU1 1377 aa15.61■□□□□ 0.09
SPTBN2-201ENST00000309996 SYCP1Q15431 976 aa15.6■□□□□ 0.09
SPTBN2-201ENST00000309996 ANO2Q9NQ90 1003 aa15.6■□□□□ 0.09
SPTBN2-201ENST00000309996 ZKSCAN1P17029 563 aaPredicted RBP15.6■□□□□ 0.09
SPTBN2-201ENST00000309996 NEFHP12036 1026 aa15.6■□□□□ 0.09
SPTBN2-201ENST00000309996 BICD2Q8TD16 824 aa15.59■□□□□ 0.09
SPTBN2-201ENST00000309996 MYO6Q9UM54 1294 aa15.59■□□□□ 0.09
SPTBN2-201ENST00000309996 EIF2S2P20042 333 aaKnown RBP15.59■□□□□ 0.09
SPTBN2-201ENST00000309996 ACBD3Q9H3P7 528 aa15.59■□□□□ 0.09
SPTBN2-201ENST00000309996 NUP155O75694 1391 aa15.59■□□□□ 0.09
SPTBN2-201ENST00000309996 BRMS1Q9HCU9 246 aa15.58■□□□□ 0.09
SPTBN2-201ENST00000309996 PAXIP1Q6ZW49 1069 aaPredicted RBP15.57■□□□□ 0.08
SPTBN2-201ENST00000309996 CENPQQ7L2Z9 268 aaPredicted RBP15.57■□□□□ 0.08
SPTBN2-201ENST00000309996 NEBLO76041 1014 aa15.57■□□□□ 0.08
SPTBN2-201ENST00000309996 SASS6Q6UVJ0 657 aa15.57■□□□□ 0.08
SPTBN2-201ENST00000309996 SAFBQ15424 915 aaKnown RBP eCLIP15.57■□□□□ 0.08
SPTBN2-201ENST00000309996 REC8O95072 547 aa15.56■□□□□ 0.08
SPTBN2-201ENST00000309996 ANKRD62A6NC57 917 aa15.56■□□□□ 0.08
SPTBN2-201ENST00000309996 PDE3BQ13370 1112 aa15.56■□□□□ 0.08
SPTBN2-201ENST00000309996 ATF3P18847 181 aa15.56■□□□□ 0.08
SPTBN2-201ENST00000309996 ARGLU1Q9NWB6 273 aaPredicted RBP15.56■□□□□ 0.08
SPTBN2-201ENST00000309996 FAM161AQ3B820 660 aa15.56■□□□□ 0.08
SPTBN2-201ENST00000309996 RRP7AQ9Y3A4 280 aaKnown RBP15.56■□□□□ 0.08
SPTBN2-201ENST00000309996 WASHC2CQ9Y4E1 1318 aa15.55■□□□□ 0.08
SPTBN2-201ENST00000309996 RNF20Q5VTR2 975 aa15.55■□□□□ 0.08
SPTBN2-201ENST00000309996 SKIDA1Q1XH10 827 aa15.55■□□□□ 0.08
SPTBN2-201ENST00000309996 PLIN1O60240 522 aa15.55■□□□□ 0.08
SPTBN2-201ENST00000309996 IFIT2P09913 472 aaKnown RBP15.55■□□□□ 0.08
SPTBN2-201ENST00000309996 GSE1Q14687 1217 aa15.55■□□□□ 0.08
SPTBN2-201ENST00000309996 HSP90B2PQ58FF3 399 aa15.55■□□□□ 0.08
SPTBN2-201ENST00000309996 MPHOSPH9Q99550 1183 aa15.55■□□□□ 0.08
SPTBN2-201ENST00000309996 DCTN1Q14203 1278 aa15.54■□□□□ 0.08
SPTBN2-201ENST00000309996 CCDC191Q8NCU4 936 aa15.54■□□□□ 0.08
SPTBN2-201ENST00000309996 ATP2B2Q01814 1243 aa15.54■□□□□ 0.08
SPTBN2-201ENST00000309996 MPHOSPH10O00566 681 aaKnown RBP15.54■□□□□ 0.08
SPTBN2-201ENST00000309996 SEPT7Q16181 437 aaKnown RBP15.54■□□□□ 0.08
SPTBN2-201ENST00000309996 FOSBP53539 338 aa15.54■□□□□ 0.08
SPTBN2-201ENST00000309996 NLRP13Q86W25 1043 aa15.54■□□□□ 0.08
SPTBN2-201ENST00000309996 DDX58O95786 925 aaKnown RBP15.54■□□□□ 0.08
SPTBN2-201ENST00000309996 NECTIN2Q92692 538 aa15.53■□□□□ 0.08
SPTBN2-201ENST00000309996 FAM13BQ9NYF5 915 aa15.53■□□□□ 0.08
SPTBN2-201ENST00000309996 CARMIL2Q6F5E8 1435 aa15.53■□□□□ 0.08
SPTBN2-201ENST00000309996 HSP90AB4PQ58FF6 505 aa15.53■□□□□ 0.08
SPTBN2-201ENST00000309996 MNS1Q8NEH6 495 aa15.53■□□□□ 0.08
SPTBN2-201ENST00000309996 ANKRD30AQ9BXX3 1397 aa15.53■□□□□ 0.08
SPTBN2-201ENST00000309996 CDK5RAP3Q96JB5 506 aa15.53■□□□□ 0.08
SPTBN2-201ENST00000309996 MATR3P43243 847 aaKnown RBP eCLIP15.53■□□□□ 0.08
SPTBN2-201ENST00000309996 ELL2O00472 640 aaPredicted RBP15.53■□□□□ 0.08
SPTBN2-201ENST00000309996 CGNL1Q0VF96 1302 aa15.52■□□□□ 0.08
SPTBN2-201ENST00000309996 CAGE1Q8TC20 777 aa15.52■□□□□ 0.07
SPTBN2-201ENST00000309996 TRIM21P19474 475 aaKnown RBP15.52■□□□□ 0.07
SPTBN2-201ENST00000309996 XBP1P17861 261 aa15.52■□□□□ 0.07
SPTBN2-201ENST00000309996 BCL2L13Q9BXK5 485 aa15.52■□□□□ 0.07
SPTBN2-201ENST00000309996 IFT57Q9NWB7 429 aa15.52■□□□□ 0.07
SPTBN2-201ENST00000309996 KIF15Q9NS87 1388 aa15.51■□□□□ 0.07
SPTBN2-201ENST00000309996 ANKRD18AQ8IVF6 992 aa15.51■□□□□ 0.07
SPTBN2-201ENST00000309996 RBM5P52756 815 aaKnown RBP eCLIP15.51■□□□□ 0.07
SPTBN2-201ENST00000309996 ZKSCAN2Q63HK3 967 aa15.51■□□□□ 0.07
SPTBN2-201ENST00000309996 COG3Q96JB2 828 aa15.51■□□□□ 0.07
SPTBN2-201ENST00000309996 MYCNP04198 464 aaPredicted RBP15.5■□□□□ 0.07
SPTBN2-201ENST00000309996 OLFM4Q6UX06 510 aa15.5■□□□□ 0.07
SPTBN2-201ENST00000309996 KIF3BO15066 747 aa15.5■□□□□ 0.07
SPTBN2-201ENST00000309996 CARMIL1Q5VZK9 1371 aa15.49■□□□□ 0.07
SPTBN2-201ENST00000309996 WDHD1O75717 1129 aaPredicted RBP15.49■□□□□ 0.07
SPTBN2-201ENST00000309996 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.49■□□□□ 0.07
SPTBN2-201ENST00000309996 NAT10Q9H0A0 1025 aaKnown RBP15.49■□□□□ 0.07
SPTBN2-201ENST00000309996 VPS37CA5D8V6 355 aaPredicted RBP15.49■□□□□ 0.07
SPTBN2-201ENST00000309996 ROCK1Q13464 1354 aa15.49■□□□□ 0.07
SPTBN2-201ENST00000309996 H0YHG0 523 aa15.49■□□□□ 0.07
SPTBN2-201ENST00000309996 CUX2O14529 1486 aa15.49■□□□□ 0.07
SPTBN2-201ENST00000309996 SMC3Q9UQE7 1217 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms